Dabb010701.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- -
- Assembly
- GCA_034092305.1
- Location
- JASJET010000034.1:526362-527135[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-07 0.00017 22.9 0.1 17 38 29 50 22 55 0.92
Sequence Information
- Coding Sequence
- atgctacaaaaatataaaagaaaatctcaacaagCATCTTGGGGTGAAGCAACTATGAAGCTCGCCATGGAAGAAGCAAATCGAACATCCATCAGAAGTGCAGccaaaaaatatggtataaatttaTCAACTTTGCAAAGGCACATTAAAAAATGTTCAGCGGAAAAGAAACTTGGGAGATTTCGCAGTGTATTTTCAGCCAGTCAAGAAACTGAATTACTTGAGTATTTGTTTCACATGGACAATCTCTTTTTTGGTCTGATCAGACAGGAATTTTGCGCTCTGGTTTATCAGTTTGCAGAAGCCAACATTTCAcatccatttaaaaataattctgcagGCGATGACTGTTTCAAATCTTTTAGAAAAAGACGCCCTGAACTTACTTTGAGACAAGCAGAACCGACTTCAGTAGCTCGTGCCCGTGGTTTTAATAGACCCCAAGTAGAAAGGTTCTTCGATCTCCTAGAGGAGCAAATCGATAAGCACCAAATTGATTGCACAAGGATCTATAATGTAGATGAAACAGGTGTTCTGACGACCAGCAACAGACCTCCTAAAGTGCTCactaaaacaggaaaaaaacaagttggtgtAATTTTCAGCACCGAAAGAGGAAAACTGACGACGATCATATGTTGCTGCAATGCTGCTGGCTCTTTTATACCACCCTTTATGATATTTGGACGTAAACGTATGAATGATCGATTACTAGATGGAGCACCACCAGGTACTGTAGCTACCTGTACGGACAACGGACTGACGATTTATtag
- Protein Sequence
- MLQKYKRKSQQASWGEATMKLAMEEANRTSIRSAAKKYGINLSTLQRHIKKCSAEKKLGRFRSVFSASQETELLEYLFHMDNLFFGLIRQEFCALVYQFAEANISHPFKNNSAGDDCFKSFRKRRPELTLRQAEPTSVARARGFNRPQVERFFDLLEEQIDKHQIDCTRIYNVDETGVLTTSNRPPKVLTKTGKKQVGVIFSTERGKLTTIICCCNAAGSFIPPFMIFGRKRMNDRLLDGAPPGTVATCTDNGLTIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00444042; iTF_00444043; iTF_00444048;
- 90% Identity
- iTF_00444043; iTF_00444042;
- 80% Identity
- -