Dabb016326.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- -
- Assembly
- GCA_034092305.1
- Location
- JASJET010000055.1:31645983-31646357[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-09 1.1e-06 29.9 0.0 3 37 16 50 14 54 0.90
Sequence Information
- Coding Sequence
- atgactggcgtcaactcaaaaacgaagagaaaagaatggaattcagagcatatggcggaacctattaaattggtaagagagaaaaaaatgggttatttgagagctgcaaaacactttgatGTGCCGAGATCTACCTTGTTTCGAATATGCCAGAAAAACGAATTACCCCCAGAAGAAGCCGCAGCTACTACACTTGGGAGGAAAACTGTTTTAGGGACAACCCTTGAAAATCTTTTGGTAGACTACATTTTGACGATGGAGAGCAAATTTCATGGCTTGACGagaaatgatgttcgaagaatgACGTACATGTTGGCAAGACGTAATCAGTTGGAAAATCCATTTGGTAACACGGTAATGGCTGGAAAAAAATAG
- Protein Sequence
- MTGVNSKTKRKEWNSEHMAEPIKLVREKKMGYLRAAKHFDVPRSTLFRICQKNELPPEEAAATTLGRKTVLGTTLENLLVDYILTMESKFHGLTRNDVRRMTYMLARRNQLENPFGNTVMAGKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00444034; iTF_00443977; iTF_00187077; iTF_00187093; iTF_00089448; iTF_00276333; iTF_00444016; iTF_00443892; iTF_00443911; iTF_00443890; iTF_00443891; iTF_00443960; iTF_00443964; iTF_00443936; iTF_01173213;
- 90% Identity
- iTF_00443977;
- 80% Identity
- -