Dabb003025.2
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- clz9_1
- Assembly
- GCA_034092305.1
- Location
- JASJET010000011.1:7306697-7308163[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-10 1.6e-07 32.6 0.0 1 40 16 55 16 58 0.89 2 2 0.77 1.9e+02 3.5 0.0 21 30 240 249 239 250 0.94
Sequence Information
- Coding Sequence
- ATGGTACGAAGTTATAAACCAAAGAATACTCGTAGCGAAGCAGTGGATGAAACTTCTTTGCAGTCAGCAATACAGGATGTAGTAAACGGAATATTATCATACAGAAAAGCTGCGgataaatataacttaaaactaTCTACATTAGAAAACCGAgtaaaaaaATCTCCTGCAAAATGGGAAGAAACTAAATTGGCTGGGAAGGATTGGATGTATGGATTTCGTAGTAGAAACCCAGACCTCAGCTTGAGAAAGCCCGAAAACACAAGTGCGGCCAGATCTTTTGCTTTCAAAAAAACGTCGGTTACCGAGTTTTACACTAACTTGAAGACCGTTTTCAGTCGACACTCTTTATCTGCTgatagaatttataattttgatgaaTCACGAGTGTCTACATTTCTAGCTACACCAAAAGTCTTGGCTCCAAGAAGTCAAAAACAAGTCGGACAGATTGTATCAGAAGAAAGAGGCGAACTTGTCACTTTTGGTGaagcACACACCTTGCACAAAAGAAATCCCGTATTATTATTGTGTGACAATCACGAGAGTCATATTACTCTGGAAGCAATCAACTACGCTAAAGACAATGGCATTATTTACCTATCTTTCCCACCTCATACATCTCATCGTCTCCAACCACTCGACATCGGAGTCTTCGGGCCCTTTAAATCAAAGCTCAAAACTGCTTTCAATAACTGGCATATTATGAATCCTGGCAAAGCACAAAGCATTTACAATATTCCTaaacttgtgaaaattgcatatttcgaaTCATTCACAGCAAAAAATATCACAAGTGGGTTCAGCACACCTAGAATATGGCCCCTTAATGAATTAGCTTTTAATGATACAGATTTTGCTCCAACTGAGGTGTATATATTAGGCAATTTGGAAAATACTCGACCTAATCAGAACATCACTGATGATTTCCCAACACTTACAACGCAGGATATTGTCGATGATCTTTGCCAGCCCTCTTGTTCTACAACACATGATTTCTTAGAGGTTCCGCAAGAATCCCAAAGATGTAGCACACCGAGTTTAATTGCTGACTGTGAATTGCAAACGTCAAACATAAATACCTATGAACAAGAAGCTTTAGATAATCCACCAATCCattaa
- Protein Sequence
- MVRSYKPKNTRSEAVDETSLQSAIQDVVNGILSYRKAADKYNLKLSTLENRVKKSPAKWEETKLAGKDWMYGFRSRNPDLSLRKPENTSAARSFAFKKTSVTEFYTNLKTVFSRHSLSADRIYNFDESRVSTFLATPKVLAPRSQKQVGQIVSEERGELVTFGEAHTLHKRNPVLLLCDNHESHITLEAINYAKDNGIIYLSFPPHTSHRLQPLDIGVFGPFKSKLKTAFNNWHIMNPGKAQSIYNIPKLVKIAYFESFTAKNITSGFSTPRIWPLNELAFNDTDFAPTEVYILGNLENTRPNQNITDDFPTLTTQDIVDDLCQPSCSTTHDFLEVPQESQRCSTPSLIADCELQTSNINTYEQEALDNPPIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -