Dcit042433.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- stc
- Assembly
- GCA_000475195.1
- Location
- CP125333.1:42120233-42123361[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 5.8 4.8e+04 -4.1 1.6 15 19 371 375 370 375 0.81 2 15 0.25 2.1e+03 0.3 0.4 4 10 405 411 404 411 0.96 3 15 2e-07 0.0017 19.8 14.5 1 18 422 438 422 439 0.97 4 15 1.3 1e+04 -1.9 0.3 5 10 464 469 464 471 0.92 5 15 2.2e-06 0.018 16.5 15.7 1 19 475 493 469 493 0.87 6 15 1.4e-08 0.00011 23.5 11.2 1 18 531 548 531 549 0.96 7 15 0.72 5.9e+03 -1.2 0.7 5 10 580 585 580 586 0.95 8 15 5.2e-07 0.0043 18.5 11.0 1 19 591 613 591 613 0.88 9 15 0.012 98 4.5 12.0 1 11 652 662 652 673 0.94 10 15 4.2e-10 3.4e-06 28.3 13.7 1 18 679 696 679 697 0.98 11 15 6 4.9e+04 -10.3 15.5 8 18 742 753 726 754 0.79 12 15 9.2e-05 0.76 11.3 7.9 1 15 790 804 784 806 0.85 13 15 1.6 1.3e+04 -2.3 1.9 5 10 810 815 810 815 0.95 14 15 9e-05 0.74 11.3 16.2 1 18 822 840 822 841 0.93 15 15 6 4.9e+04 -4.1 1.4 6 10 882 886 881 886 0.88
Sequence Information
- Coding Sequence
- ATGGATCAGAGACGGTCCCATAGTAAACCCCAAGCCCACTACAACCGGAGGCGTCACTACAATTCCAACCTAAACCCAAGTGCCAATGATTTTATTCCTACATCCCAGTATTATGAAAGACCAGCAGGACCTTCTCATTCCCGGGATGAGCAAGATAATCAAAGTGAACCATGGCCAAGAGATGAGAGAAGATTTAACCAGGAGTATGGTGATGCACGGAGAAATAATCCAAGAAGAAATCAATATggtaacaacaataataatagaccaAGATTCAGTAAAAGACCACAGAATTATAATGATAATGTGAATCCAATACCTGACTCTGAAAGTAGGAACAACTATTCTAATGGGCAGGGTTTTTATAATAGAAGAAATGATGAGCAATTTGATGATAGAGACCAACATTACAATGAGGCTCAGCAAGAACCTCCATTTGATTATAATGGAAGGGAATCAAGAGAGATGAGTGATTTCCAGTCAAATTCCATCAGAGAACATCAAAATCATAAAAGCAGTTCAGCTCGTAACAACAATAGAAGGTATGGAAGTCCTCAATCCTCAAGACACTATCAAGGAGGCTCAAGTGATGTAAGATTTGATGATTTTTATCAAGACCAAGTGCCCAATAATGAGAGACAAGATAGATTTAGACCAGGAAGCTCAAACCAAAATTTGCCCAGGAGAAGTCAGTTTGGAAAACCAAACAACAGCAGAGACAAAAGGTATAACAATGATAGAAACTACAATAATGGAAGAGATAGTCAGTATCAACAATCACTATTCAATAGCCGAGAAAGATCCTTTGGtaaaaatggtcaaaatgtCCATGTTATGGGtcatataggtattatacagCCTTTGCTTGGTAAAATCAATCTTGATGACAAAAATTCCAACTATTCAAAGTTCAATTTGGATGAAGAAGTAACATCTCAGAGAGACAAATTGATTCAAATTTTGTTCAAAGGAACACAAGAATGTCTTGTATGTTGTGAAAAAATTGCTCAAGCTCAGGCTGTTTGGTCATGTGGCAAATGTTACAACATACTCCACTTGGTATGTACAATTCAATGGGCTGACTCATCTCATACAGAACAAGGCTGGAGATGTCCTGCATGTCAAAATGTGAGCACAGAAGTACCCAAGGTGTATGAATGTTTCTGTAAGAAGCAGGTGTTGGACATTGGTTGGAATCGCTCTGATATCCCTCATTCTTGTGGAGAAGTTTGTAGTAAAGAACTAAAACGAGGAGATAGTCCATGTGGACATCGATGTACATTACTATGTCATCCTGGTCCTTGTCCTGTCTGTGAGATTGTCATCACTCGCTACTGTGGTTGCAAACGTACCAACTGCCAGATGCAGTGTGGTTCTACAAAGGTAATGACATGTAGTGCAGTGTGTGGAAAACTTCTCAATTGTCAACAGCATCAGTGTGAAGCCACATGTCATGAAGGTACATGCCAACCTTGTAGCCAACTTGTAGAACAGAAGTGTTTCTGTGGAGCTAATACTAAAAGTATTATTTGTAGTGCAGATGTGGAGCTGAATTATTCATGTGAAGGTACATGTAGCAAGCAACTGGAGTGTGGCAATCATGAGTGTTCCAACATATGTCATCCAGGTCCCTGTGACCTCTGTTATCTGATGCCTCAGTTCATTACTACTTGCTGCTGTGGCAAAACTCACCTCTCTGCAAATCAGAAGAGAAATTCCTGCACAGATCCCATACCAACCTGCACCCAGGTATGTGGGAAGACTTTACACTGTGGAGAGCTAGAAGAGAAACACAAATGTAAAGCTCAGTGTCATGAGGGTGACTGTCCTGTGTGTAAACTTAGCAGTGTTGTCCTGTGTAACTGTAGGCAAAGGAAAAGACAAATTCAATGCAGTGAACTCAAACCTGGTGCTGTAGTCAAGTGTAACATCAAGTGTTCTACTATGAGATCTTGTGGTAAACATAAATGTAATCAGGTTTGTTGTATAAGTCAAGATCACATTTGTCCTCTGACTTGTAACAAGAAGTTACGTTGTGGTACACACAAATGTGAACTACTTTGTCACAAGGGTCCCTGTCCCCCTTGTATGAACGTCAGTTTTGAGGAACTTACTTGTAGATGTGGAGGAGAGGTTATTTTCCCCCCAGTACCATGTGGTACCAAGCCCCCCCTTTGTGGTAGGGTATGTTCCCGCTCTCATCCATGTTCCCATCCTCCTGCACATACCTGCCATGATGAACCTGAATGTCCTCCCTGTGTGGTGTTCACAGAAAAGTGGTGCTTTGGTAAACACCAAGTCAGGAAAAATATCTTCTGCTATGTCAACTCTTATTCTTGTGGTCAGGCGTGTGGTAAAGTACTCAAATGTCAAAGACATTATTGTATTTTACCCTGTCATGAAGGGGATTGCTTGAAAGCCAATGAGAAATGTAAACAAGTATGTACAAGACCTAGACCTGCATGTGGTCATCCTTGTAATGAAAAGTGTCACCCTGGAGCATGCCCTGGTAGTACTTGCACTATGAAGATACAAGTAGCTTGTAGCTGTGGAGAACGAAGTGAAACTCAAGCCTGTATTGAAGACAAGTCTTTATTGGAGCAGTTCAATAAAACATCCAAGGGAGAATATAAGATTCTGGAATGCAATGAAACATGTGCTCAAATTGATAGAAATCGAAGATTAGCATTGGGACTACAGATCAAAAATCCGGACCTCAATCTAAAACTAAAACCTGTGTATCCAGATTTCCTGAAACAATGGGCAAAGAAAGACCCCGAATTTTGCAACTATGTTCATTCCAGATTGTCAGATCTTGTCAAGTTATCCAAGGATTCCAAACAGAAATCCCGTAGCTTTTCATTTGAAGTGATGAATAGAGACAAGCGCCAGTTTATCCATGGTTACTGTGAATTTTTTGGCATTAGTGCTATTGACTGTGACCCAGAACCAAAGAGAAATGTTCTGGTCACTGCATACAAAGATAAAGTTTGGTTACCTGGATATAGTCTAATGGAAACTatacagagagaaaaaggacagccTAAAGTGCCCATGCTTCCTAGTAGAGAAAACTTGCCAAAAAGTAGTCGAAGTGAGATGGTCCAGCTAGGAGGAAAGAAAAGCTAA
- Protein Sequence
- MDQRRSHSKPQAHYNRRRHYNSNLNPSANDFIPTSQYYERPAGPSHSRDEQDNQSEPWPRDERRFNQEYGDARRNNPRRNQYGNNNNNRPRFSKRPQNYNDNVNPIPDSESRNNYSNGQGFYNRRNDEQFDDRDQHYNEAQQEPPFDYNGRESREMSDFQSNSIREHQNHKSSSARNNNRRYGSPQSSRHYQGGSSDVRFDDFYQDQVPNNERQDRFRPGSSNQNLPRRSQFGKPNNSRDKRYNNDRNYNNGRDSQYQQSLFNSRERSFGKNGQNVHVMGHIGIIQPLLGKINLDDKNSNYSKFNLDEEVTSQRDKLIQILFKGTQECLVCCEKIAQAQAVWSCGKCYNILHLVCTIQWADSSHTEQGWRCPACQNVSTEVPKVYECFCKKQVLDIGWNRSDIPHSCGEVCSKELKRGDSPCGHRCTLLCHPGPCPVCEIVITRYCGCKRTNCQMQCGSTKVMTCSAVCGKLLNCQQHQCEATCHEGTCQPCSQLVEQKCFCGANTKSIICSADVELNYSCEGTCSKQLECGNHECSNICHPGPCDLCYLMPQFITTCCCGKTHLSANQKRNSCTDPIPTCTQVCGKTLHCGELEEKHKCKAQCHEGDCPVCKLSSVVLCNCRQRKRQIQCSELKPGAVVKCNIKCSTMRSCGKHKCNQVCCISQDHICPLTCNKKLRCGTHKCELLCHKGPCPPCMNVSFEELTCRCGGEVIFPPVPCGTKPPLCGRVCSRSHPCSHPPAHTCHDEPECPPCVVFTEKWCFGKHQVRKNIFCYVNSYSCGQACGKVLKCQRHYCILPCHEGDCLKANEKCKQVCTRPRPACGHPCNEKCHPGACPGSTCTMKIQVACSCGERSETQACIEDKSLLEQFNKTSKGEYKILECNETCAQIDRNRRLALGLQIKNPDLNLKLKPVYPDFLKQWAKKDPEFCNYVHSRLSDLVKLSKDSKQKSRSFSFEVMNRDKRQFIHGYCEFFGISAIDCDPEPKRNVLVTAYKDKVWLPGYSLMETIQREKGQPKVPMLPSRENLPKSSRSEMVQLGGKKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -