Basic Information

Gene Symbol
Gata5
Assembly
GCA_000475195.1
Location
CP125321.1:14996919-15006563[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.8 3.2e+04 -4.0 0.1 11 19 474 482 471 483 0.81
2 3 7.7e-16 2.5e-12 47.6 4.0 1 35 913 946 913 947 0.97
3 3 5.8e-16 1.9e-12 47.9 9.1 1 35 971 1004 971 1005 0.97

Sequence Information

Coding Sequence
ATGGCTGTGGTCCAGAAGAGGAACTTTACTCGAAGTAAGAACGAATTAGTGAAATTGAAGGAGGTGATAGAAGGAGTGAAGGCCAAATCTATCACAGATGATAACTATGAAGGTGCAAAGACTCTGTTCAAGGTATTCACCAGCAAATTGAAGACATACGAAACAAGACGGAATGACTTGGAGGCTGTTGCACAAGATGAAGATCTCGACGTCCTAATACCCAAGGAGAGTGAGGATTTATATGACTATCTATCAATATGTTTATTAGATATAGAATCGTCACTGATTCAATACCAGGTtgtgaagagaaaggagaaagaggagtatgaggatgaagagagaaagagaagggaagagagagaagataggaaggaacaggaagagagagaagagagacgggaaagagaagagagggaaggtaGAATCAGACTCCAAGAGTTAGAAATTAGGAGATTAGAAGTAGAGAAAATCTGTGGGAATTCTGTGGGTTCTGGTAATAGTCTCGCTACAAATTCATATTCTCATCTCCCCAAGATCGATTTAGTTAAATTTTCAGGTAAAATAGAGGAATATCAGGGTTTCTGGGATAACTTTCAGAGTTTGATAGATAGTAGACCAGACCTTGACGATAATGTTAAATTTCATTACTTGAAAAATCAGTTGACAGGTGATGCAGCGTCTCTTATCGCGGGCATTCGTATTACGAATGAGAATTATGCTGTAGCCGTACAGATTCTGAAGGATGAGTATGGGTCACCTCGTTTGGTAAATACCAAATTATTCAGTGAAATACAACACATGAGAGTAGCTCGTTCTGGTCGCACTAACGATGTACACGAGTTGTATAGACAGCTCGAAATAAAGCTGAAAATGTTAGATAATCAAGGGGTAAATATGGAAAATGAGATTTTGTCCTCAACCTTGTTTAAAAAATTGCCTTTTAAAATTCAACAGGATATGGTCAGCCAGAAGAAGTCCGACTTCATATCCACACAGGATATACGAGAGAGGATGAGGGACGAGTTAAGGAGCGATCGCCTGCTAAAGGCCATGAATCCAGAGTTATGCTATTCGCCCCCTCACTCCCCGCAGAAAGCTCACACTCCGCCAGAGAATACCTACGAGCCACCTCAACGTTATACTACGGAGGCGCTCTATAGTAAGACCTACGTTAGATCTCCCAATGGTAAGCCTTATAATATTATTTGCGCGTATTGCGGTGAAGACCATTATTCTGATCAGTGCGCGAAGTACGCGACCATTCCTCAGAGGAAAGAGAAACTAAAGAACAACTGTTTTATCTGTCTAAAGTCAGACCATTTTGCAAGCGAGTGCAACGCTGATTTTCCTTGCTATCATTGCAAGAAGCGGCGCGCACATCATCGCTCGTTGTGTGACAAGTTTTCTCGAACCGATAATAATTGGCGGGATAATGACAATAGTAATGTCGAAAATAAGGACGAGCCGTGTACGAGCCGAGTTCTATCCGCTCTCTCACAGGTGAAGAAGTCCGTGGTATTCATGCAGACTGCCTGCATACAGGTACATAGTAAAGCGCTAGATAAAGTGCTCAAGATTAGAGCCCTATTTGATACTGCGAGTAGTCACTCGTATATTACCAGTCAGCTGTACGAGCAGTTGAAACTTGAGAATAAGGAAAGTGgggaattaaatattttcacGTTCGGTGCGACGTCCCCGGATAAGTTGAAAGTCGCGCAAACTGAAATTGACGTACTGTGTGAAGGcaataagaagaaaacattgGATGTTTTTGTTGTACCTAACATAGTGGGAGGTAGAAACTTGAATTTCGACAAGAGTTTTCTCCGAGAGTTGGATAAAAAATATCAGCTCTGTGACGAGTACTTACTACAAGATAATCTCAAAGAAATAGACCTACTCATAGGTATTGATTATTATACTCAGTTTGTGAGTGGCAAACGGATCGATTTAGAAGGCAATTTGTGCCTGTGGGAAACTTCGTTTGGAAACGTTCTGAGTGGTACTAAGCATATCACTGTAGAAGACAGAGGCGTTCAGGAAAATGACGTTAATACTGTTGTACTCGTTGATGCACATTTCAGACGAGATTCATCGGAGAGTTTGCCTAGACGCGGCACTTATAAAACTTCAAAGATGAAAGACCCTCATGACGTCAGTAGTGTGGATTCGCTGCTACCGCCGTTTTATTCACCAGTCAAACATGAGAACAATAAACTCGCTGAGGGATTTCTGAGGAAAAATTCGGATAGAACTGTTCAGTCAAATTTTGAGCTAGCTTCAAGACAGCTAAAGCCGGAAATAAAGAGACATCCCAATGAGGGTATATTGGAATCCTGTAAGCAAACTTTTGATGACCAGTTGGATAAAAGTATCCCTCGAAAAGTGTATGATAAAAGAGGAACCTCTTACTCTGATGGAATTCAGTGTCCATGGTCTGGGAACTATCTAGTTTCTCTGAAGGGTATACCGAACAAATACCCGTACAGTATTGCCAATGAGCAACTTACCAATTATCAAGTGACCAACAGCAATCTGAACCTGAACAAAACGGCAGAAAACTACTGGCAATCTGGCAACATCTGTTTGGAATACGCCAATGGGAGCGCGAACACACCGCCGGGCAGTGCGTCCGGCAACGCTGGATATAATGACAGTTATATTTTCAACAACACCGGCAATTGGACTCAGGAGTATGATTCAAatatGATGCTTAACATGGACATCAAGGAGTGTGTAAACTGTGCCGCCAATTCTACACCCCTCTGGCGGCGGGACGGGACGGGCCACCATTTGTGTAATGCGTGTGGCCTATACAACCGGATCAACGGCGTCAATCGGCCCCCCGTTAGGACCAATCAGAAGAAAGCATTGCAGCAAACGGGTAACAAGAGGAGCGGTGTGTCGTGTGCCAACTGTTCCACCACTTGCACCACTCTGTGGCGACGCAATAATAATGGGGAACCAGTGTGCAATGCCTGCGGTCTCTACTTTAAACTGCACAATGTAAATCGACCCTTGTCTATGAAAAAGGAAAGCATCCAGAACCGGAAGAGGAAACCCAAAAATCCCGGATCTTCCATGTCTCCACCGCTGCTGAAAACAAGTGACCATCATTCTGCCAGACATCACGGTCACCAACTGCTGACGGACGGCAAGCTGGTGCTTCCCCACATGTCCCTAGGGCCGGGAGATTCGTTAGTCAACTCAGAACATTACATCGGACAGTCACCTTTCCTGTTGTCCTCGACGTCACTACTCAATCGACACATATCCAGCTTTCAGAATATGGGATTTCAGTTTCTTCCTGAATTGACCTTCTGGATTACACGTGGCGAGGGTCACGAGGCCTAa
Protein Sequence
MAVVQKRNFTRSKNELVKLKEVIEGVKAKSITDDNYEGAKTLFKVFTSKLKTYETRRNDLEAVAQDEDLDVLIPKESEDLYDYLSICLLDIESSLIQYQVVKRKEKEEYEDEERKRREEREDRKEQEEREERREREEREGRIRLQELEIRRLEVEKICGNSVGSGNSLATNSYSHLPKIDLVKFSGKIEEYQGFWDNFQSLIDSRPDLDDNVKFHYLKNQLTGDAASLIAGIRITNENYAVAVQILKDEYGSPRLVNTKLFSEIQHMRVARSGRTNDVHELYRQLEIKLKMLDNQGVNMENEILSSTLFKKLPFKIQQDMVSQKKSDFISTQDIRERMRDELRSDRLLKAMNPELCYSPPHSPQKAHTPPENTYEPPQRYTTEALYSKTYVRSPNGKPYNIICAYCGEDHYSDQCAKYATIPQRKEKLKNNCFICLKSDHFASECNADFPCYHCKKRRAHHRSLCDKFSRTDNNWRDNDNSNVENKDEPCTSRVLSALSQVKKSVVFMQTACIQVHSKALDKVLKIRALFDTASSHSYITSQLYEQLKLENKESGELNIFTFGATSPDKLKVAQTEIDVLCEGNKKKTLDVFVVPNIVGGRNLNFDKSFLRELDKKYQLCDEYLLQDNLKEIDLLIGIDYYTQFVSGKRIDLEGNLCLWETSFGNVLSGTKHITVEDRGVQENDVNTVVLVDAHFRRDSSESLPRRGTYKTSKMKDPHDVSSVDSLLPPFYSPVKHENNKLAEGFLRKNSDRTVQSNFELASRQLKPEIKRHPNEGILESCKQTFDDQLDKSIPRKVYDKRGTSYSDGIQCPWSGNYLVSLKGIPNKYPYSIANEQLTNYQVTNSNLNLNKTAENYWQSGNICLEYANGSANTPPGSASGNAGYNDSYIFNNTGNWTQEYDSNMMLNMDIKECVNCAANSTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRTNQKKALQQTGNKRSGVSCANCSTTCTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKESIQNRKRKPKNPGSSMSPPLLKTSDHHSARHHGHQLLTDGKLVLPHMSLGPGDSLVNSEHYIGQSPFLLSSTSLLNRHISSFQNMGFQFLPELTFWITRGEGHEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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