Dcit035365.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- Zbtb33
- Assembly
- GCA_000475195.1
- Location
- CP125332.1:9817531-9819819[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0059 0.52 12.3 0.1 1 23 10 33 10 33 0.96 2 17 0.042 3.7 9.6 1.0 1 23 119 142 119 142 0.95 3 17 0.34 30 6.7 1.7 1 23 234 257 234 257 0.93 4 17 1.3 1.1e+02 4.9 0.8 9 23 274 289 262 289 0.77 5 17 0.13 11 8.1 2.8 1 23 312 335 312 335 0.93 6 17 0.0013 0.12 14.3 2.1 1 23 340 363 340 363 0.98 7 17 0.022 1.9 10.5 5.8 1 21 389 409 389 412 0.95 8 17 0.14 13 7.9 0.1 1 20 420 439 420 440 0.94 9 17 0.001 0.09 14.7 1.1 1 23 477 499 477 499 0.97 10 17 0.022 1.9 10.5 4.5 1 23 505 528 505 528 0.98 11 17 1.2e-05 0.001 20.8 2.7 1 23 554 576 554 576 0.99 12 17 0.00018 0.016 17.1 4.4 1 21 582 602 582 605 0.95 13 17 0.00021 0.018 16.9 0.4 1 23 610 632 610 632 0.97 14 17 0.0024 0.21 13.5 5.0 1 23 638 660 638 660 0.97 15 17 0.001 0.089 14.7 2.0 1 23 666 688 666 688 0.98 16 17 0.0023 0.21 13.5 2.4 1 23 695 717 695 717 0.96 17 17 3.8e-05 0.0033 19.2 1.2 1 23 723 745 723 745 0.98
Sequence Information
- Coding Sequence
- ATGGTTGCACAAACTGGAAGAGGAACATTTATATGTTGGTACTGTAATGAGGGTTTGCAAGATAAACGACAGTTGGAAATTCATATTAAAATAGAGCATGGCCAGCTTGTATATGGACAGAGCGAGTGGTATGGTTGTAAGTTATGTTATAATGCATTGTATTGTCGTCGTCAGGATATCATCAAGCATATGCGAAATGCACACCAATATGAGTTTATTCAAGCTCAAGATTATCTCATTCAATCTATCCAAGAAATCGACTTGCCTTGTGAAATGTGTGGCGAGAAAAATTTACTGTCTCGATATTGCAACAAACATCGTTCTGTCAGGTTAGAAATGGATAACCAAGTAAATCATATTTGTCATCTTTGCAATGCTAGCTATGCGGATAAGAGAATCTTGCAGGCTCATTTAAATATCCAGCATGGTAAACAGATTCATAATGATCCCAACTTTGAATGTTACATCTGTAAACAATGTTGTGATCAGATTTATCTTGGACGTGAAGATTTCCAAGCCCATATGAGTCAAGTTCATGACAAAACTCTTATGGACAACTTGAATGAGTGTGTGGTCAAATCTTTGACCCAGATTGTTTTCTCATGTAAATACTGCCAAGAGCCATGTTTATTCTCTGGTTTTTGTCGTAAGCATGATGCGAATGTTAAGATTGACAATTGTAGTGAACATCCCGAGTCTCATTCATGTGAACCTTGTAATGTCATGTACACGGATTGTAATGATCTATGGATTCACATGTTCTCACAGCATATTGATGAAACGCTCTATTGTAATTTGTGTGAACATTCAAAGCTAGTTGTTATCAAATCGCCAAGTAATTTGATGAAACATTGGAAGCGTTCACACAAAACTGATAAATTTGATGAAGAGCTGAGGGCAAAGTCTGAAATTCTGCTGGATGGAGAAACCAAATTCTTGTGTAGTGAGTGTAGTTGTATGTTTTCTGATTTCATAATGTTGAGAGACCATTATAAAGAAAAACATGGTTGTGAACGTTACTATTGCGATGATTGCCGGAAATATTTCAAAGGCAAGAAAAGTTTAGGTGATCATCGCCGTAAAATACACGGGATTCACATCAAGTCCAGGACAAATTCCAACTTGAAAGCAATGTGTAGGAGGATGAAGGATGAGGGTGTGTGTTACGAATGTCCTCATTGTGGATGTACACTGAAAAGATTCTTCAGCCTCAAAGAACACATGCTTTGTGTGCATGCTCGtaatgaagagaagaaacacGTGTGTTCTATGTGTGGAGCAGCCTTTGCATTGGCAAGACGGCTTCGTAACCACTATGCTTGCGTACATACAGCTCAAATCAAAGTCACTGTCCAACCTCAGTCCTCTAGTTCAGATCATAGGCTTGTCAAGTCCGAGGTACAAATACTTGAAGGTGACCGAATCAAGTACAAGTGTCCTCTGTGTGATCGAATTTATACAAGTTTCTCGGAGACAAAACGACATTTTGAAGTTCACTCTGGTGAGCGCAAGTATACGTGTTCTATTTGTAGCAAGTGTTTCTTTATTAAAAACAGACTGTCCGAACATTATCGTCGGGTGCACAAGATGAGAGTTTCAATGGCGAGGACAAATGATGTGAAGAAAAGTGCGGAAATTAGTGTTGATGGTGTTACCAAATACAAGTGCCATATTTGTGATTCTATTTTCACACGTTATGATTCGTTGAGATTACATGTGAGAACACACACAGGAGATAGACCTTATACTTGCGATGTTTGTGGCAAATCCTTTGTCGCCAAGAAACATTTGAACCGGCATTACAATTGCTCGCACGCCGGCTTTGGTTATCAGTGCAATATTTGTGGTCGTGTCATGAGTGATAGTACAAACTTCAAGGATCATCTTGATAATCATAAGGGCGAGAAGAAGTATACTTGCGAAATCTGTGGCACAGGATTCATGTACAAGTCTTCATTACATCATCACAAGTTCAGTCACAGCAAGGAGCGGATGTTCCAATGctctttttgtgaaaaaaagtaCATGAGTCCGAAAACATTGAAAGAGCACGAACAAACCCATAGGTCCGGTGATATCAAACATATTTGCGATACATGTGGAAGTGAGTTCAATACGAGGAAAAATATGCTCCGACACACTAAAGTTCATAGTACAGAACGACCATATATTTGTGAATATTGTAATGTtagttttaaagaaaagaagtcACTGGTGAGACATTATAAAATACACAAGGGAGTCAATACCAATACGCTTCCTTCCAACGTGAAACTTGTTGCAATCTAG
- Protein Sequence
- MVAQTGRGTFICWYCNEGLQDKRQLEIHIKIEHGQLVYGQSEWYGCKLCYNALYCRRQDIIKHMRNAHQYEFIQAQDYLIQSIQEIDLPCEMCGEKNLLSRYCNKHRSVRLEMDNQVNHICHLCNASYADKRILQAHLNIQHGKQIHNDPNFECYICKQCCDQIYLGREDFQAHMSQVHDKTLMDNLNECVVKSLTQIVFSCKYCQEPCLFSGFCRKHDANVKIDNCSEHPESHSCEPCNVMYTDCNDLWIHMFSQHIDETLYCNLCEHSKLVVIKSPSNLMKHWKRSHKTDKFDEELRAKSEILLDGETKFLCSECSCMFSDFIMLRDHYKEKHGCERYYCDDCRKYFKGKKSLGDHRRKIHGIHIKSRTNSNLKAMCRRMKDEGVCYECPHCGCTLKRFFSLKEHMLCVHARNEEKKHVCSMCGAAFALARRLRNHYACVHTAQIKVTVQPQSSSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKGVNTNTLPSNVKLVAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -