Basic Information

Insect: Diaphorina citri
Gene Symbol: -
Assembly: GCA_000475195.1
Location: CP125327.1:1755517-1777882[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.038 3.3 9.7 0.5 1 23 42 65 42 65 0.90

2 17 9.5 8.3e+02 2.2 1.1 2 23 69 91 68 91 0.93

3 17 0.51 45 6.2 3.1 1 23 897 920 897 920 0.95

4 17 0.34 30 6.7 0.6 2 23 965 987 964 987 0.95

5 17 0.41 36 6.5 0.2 1 23 999 1022 999 1022 0.98

6 17 0.012 1.1 11.3 2.8 1 23 1028 1051 1028 1051 0.98

7 17 0.0019 0.17 13.8 0.8 1 23 1058 1081 1058 1081 0.97

8 17 1.8 1.6e+02 4.5 1.7 1 23 1089 1112 1089 1112 0.96

9 17 2.8e-05 0.0025 19.6 0.1 1 23 1118 1140 1118 1140 0.97

10 17 2.4e-05 0.0021 19.8 1.6 1 23 1147 1169 1147 1169 0.98

11 17 5.3e-07 4.6e-05 25.0 3.5 1 23 1174 1196 1174 1196 0.98

12 17 0.00014 0.012 17.4 4.7 1 23 1202 1224 1202 1224 0.99

13 17 0.00065 0.057 15.3 4.0 2 23 1231 1252 1230 1252 0.96

14 17 9.7e-06 0.00086 21.0 0.5 2 23 1259 1280 1258 1280 0.96

15 17 0.33 29 6.8 0.4 1 23 1287 1310 1287 1310 0.90

16 17 3.2e-05 0.0028 19.4 0.9 1 23 1316 1338 1316 1338 0.97

17 17 0.57 50 6.0 0.3 2 23 1345 1367 1344 1367 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.038	3.3	9.7	0.5	1	23	42	65	42	65	0.90
2	17	9.5	8.3e+02	2.2	1.1	2	23	69	91	68	91	0.93
3	17	0.51	45	6.2	3.1	1	23	897	920	897	920	0.95
4	17	0.34	30	6.7	0.6	2	23	965	987	964	987	0.95
5	17	0.41	36	6.5	0.2	1	23	999	1022	999	1022	0.98
6	17	0.012	1.1	11.3	2.8	1	23	1028	1051	1028	1051	0.98
7	17	0.0019	0.17	13.8	0.8	1	23	1058	1081	1058	1081	0.97
8	17	1.8	1.6e+02	4.5	1.7	1	23	1089	1112	1089	1112	0.96
9	17	2.8e-05	0.0025	19.6	0.1	1	23	1118	1140	1118	1140	0.97
10	17	2.4e-05	0.0021	19.8	1.6	1	23	1147	1169	1147	1169	0.98
11	17	5.3e-07	4.6e-05	25.0	3.5	1	23	1174	1196	1174	1196	0.98
12	17	0.00014	0.012	17.4	4.7	1	23	1202	1224	1202	1224	0.99
13	17	0.00065	0.057	15.3	4.0	2	23	1231	1252	1230	1252	0.96
14	17	9.7e-06	0.00086	21.0	0.5	2	23	1259	1280	1258	1280	0.96
15	17	0.33	29	6.8	0.4	1	23	1287	1310	1287	1310	0.90
16	17	3.2e-05	0.0028	19.4	0.9	1	23	1316	1338	1316	1338	0.97
17	17	0.57	50	6.0	0.3	2	23	1345	1367	1344	1367	0.90

Sequence Information

Coding Sequence: ATGGAAGCCTCATCGTCTAGTGGCAGTGCAACAGCAAATCCTGTTCAAAGCTGTTCTATGTGTCCGGATAAATTCCTATCAAATGACAAGCTTGTGTTACACTATGTCATCAATCACAAATATCATATTTGTGAAGTGTGCACTACTGTGACTTCTACTCTGGATGATCTGAAAAATCACGAGTCTGAGACTCATCTACCATTGAAGTGTGAAATCTGCTGCTACCAAATCACCGAGCTTTCTGAATTGACCACACATCGTGCCACGAGTCATCAACTTCTCACTTGTCACTTCTGCCCCCTCACATTGAACACAATGTTTGAATTGAACTTTCATCTGAAGAGGAAGCATTTTGTGCTGGTTGAGCCATTGAATTTAGACCAGGGTCTGTTCAAAGACTTCAGCATGGGCAAGTGGGGATACCTGTGTTTGCTGTGTGGCAAGAATAGGGAAACATctgGTTTCATTGGCCACTATCGCGGGTTTCACCGTATTAGGGTCCCAACACTGGCCAAAATCCTTCTCAAGCAAAATATCACACCTCTCTCTATCATGGGAACTCTAGGCCCAGAAGAAGAGGCAGACCATACCAAAGATCTACCCGATATAGACCACACCACCCATCAACCTTATGCAAATGTAACAAACACATGTAATGATAGTGGACAGAGACAATACCAAGCAGATGTAGACTTAGCAAATATTGATGGAAACATGACCAGTGGATCTAGCCAGCAAACGTGCATTGGAGTACCCAAAGTAGAGTATCCATGTCACCAAACACTCATTGTACCAAAAGTACCTGAAACCTATTTACAGACAGTGTACCAAATGAATGCACATATGAACCAAACACTTCCTGTACCAAGTGCTATATGTCATCAAACCCGTGCAATACCAAATGTATCCGCTCCTAATGCCCATGAACTACACATACCAAATCTGTCTGAAAACGATATGGGTGGACCTCATGAAACCCATGTAGCCGATAATGCTATGAGTAGTAATATATGCCAGCAATACACTGGTGTACCAGCCAAACATGATTTCCACAGCACACTTCAACCCGGGGTAGGTGTACCAAACCCTAGCAGTCACACATACCAAATCCAATCGGCAACAAATGAACTACCGGCTGACCCCTTGAAACCTGAACCAATAGAAAACAAACACAGTGTTGCCAGTGAGGGAACCAGGGCTTGTGGCAATATTGCAAATCAATTGACCAATGAGGAGAGGCTAAATTATATGCCCCAGTACAATCGAGTGCCATGTGACAACCCTGTAAACATTAGGCAAGGTGGCAACATGGGAGAGAGGCTTGATATGTCTGGGTACCCACATCAATCGGTTATTACCAATGCGAGAGGGAGTGCAGTACATCAGCCAAGTAATGTTGTACCGAGTCATCTAACACATCAACTAGATAGTTCCCATCTAGTTGATAATATTCAGACTAGTCAACTTCCTAATCAAATTTCTGGGACACCCTATAGCAGTCAATCTGGTGATCCCAATCATTCTGACACACCCTATGCCTGTCAACTGAGTAGCAATGCTAATCAAATTTCTCGACCCCCCTATGGTACTGActcatctgacaacactggtgcaatgttgccaagtcaGAGTTACCCTGGGGTGGTAGTGGGGGCATATAGTGAGGGATTGGATggtagtggttctcaaaatatCGGGCATGATGTCAAATACAGATCGGAGTTAAGTGggggcagtggttctcaaaacaCGGGTAGCATTCCTCAGTACAGTTCAGACCTGGGTGCAGACAGTGGTTCTCAGAATATTGATAGTAAAATGGCATATAGTGCTGGGCTGGATGGTTCTCAAGACACAGCGGGTGGTAATGCTAGTGGTGGAGATTCTCTACTGTATTCTATGCTGCTGCAAGGAAATAGGAATCCTGAGGAGTCATTAGAACCTCCTGTTGTAAGGCAACCAACTCAAGatAACTCAGCAGCTACATCTCCCACATCACCTACTCTACCTCCAGACCTGTCTGTATCTAGGGAAGATAAGTTCTCATCAGAGCCTGAAGACACTAGTGATGAGGAATCTACCAGTAGTAGACGTGATGGTGGTATGAGCAGTGGATATTATGTGGCCGGGACTAGCAAACCATTGGCTACCACGGACCCGAGACTGTATGAAGATTTTGACGATGTAGAACCTGAAGTAGATCCGAACGATGTGGAATGTGTATTGACTGAGACTTCGGATGTAGAATCTGTAAcccaggaggaagaagaagaggagggggaaggaggagaaggagaaggatctGGGAGTGAGAAACTGATGACCCGACTGTACAATATGGCCATGCAAGGTGGTACTGTTAGCCAAGTGAATACAAGTGATGATTCTGACGTGAAGCAAGATTGTCCTGATAATATACCGAAGAAACTGGGCAAATACCTGGTGCTCAATAATCTGGTCATATGTAGCAAAATTGGTTTAAATCAAATGGAGCACGCGCCCAATGGATTTCGCTGTGAGGTGTGCCATGGATATTTCGACTCCAGGGAGGGGCTCAAAGAATTACTGCGCCATATGCGTACACTACACGGtatcaaatgtaacaaggatacGCGACATCTTAGTAGTGTGTTTGATAACTTTGGTAGAATCAAGATGACGTCCTATCCAGAATATTGCGGCCCTATTCACGTGTGTCCGTTCTGTAGTCTACGTGCCTCCTCCAAGCGATTCCTACGCCGTCACGTGTTCACGTTTCACGGGGATACGTGGCTACTGGACGCACCGGCGGGTCCGCTCAGTTACGCATGCGGTCAGTGTAAGCGTAGCTTCTGGCATATGCGTGAGAGAGATGTGCATGAGATGTCGGAACATGAGGACGTGAGTCCGCTCCGGTGTCATATATGTGTACGGCCGTTCCTTAGGAAAGTGCTGGTGAACGAGCACATCCGTCTATCACATCCAGAAGAGAATGGCATGCATGGATGCGTGTCGTACAAATGTCGGTCCTGTGATATACTTCTGGCGGATTATACAAGTCTGGAGAGCCATGTCAAAACTGAACATAATCACAATACAGTGTACAGGTGTTCGCATTGTGATCTGGGCCTCAAGAATATGAAGTCACTGCGGTATCATATCAAGATGCAGCACGGCAAGGCGAGTCAAACGTTCGAGTGCGAGCTGTGCGGGCGAGTCACCTACTCGCTCCGCTCTCTCAACTCGCACCGCCGTCTCAAGCACGACTCCGCCCATCGCGCCCTGTTCAAATGTCGCCTGTGCTCGGATACCTTCGAGACCAAGGACGAACGTCAGCTGCACTATGCGAAACAACACGTGAATCAGAACCCGTTCATTTGTCCGGATTGCGGCAAGGGGTTCGCGTCCAAGTCTGGCCTCTACGGACACCGACAGGTTCATAAGGTTCAGGAGAATTTCTTCAAATGTCAGTTCTGTGGCAAGGAATTCACCAGGCGGGATAGTTATAATGAGCATCTGCTTATACATATGGGACCAAGACACAAGTGCCCACACTGTAATAAAGATTTCGTACAGAGGTCCAACCTTGTGCGACACATTCGAATACATACGGgTGAGAAACCATACAAGTGTACCCACTGTGATAAAACATTCAGTGATAAGGGAGCGTGCAATTCTCATATTAGAGTGCACACAGGTGAAGAAACATGCGCCTGTCCGTTCTGTGGTCAGACCTTCTCTAAGAAACAGaaattgAAATACCATGTGAGGAAACACACGGGAGAAGGATTACTTGAATGCGACATCTGCAACAAGACGTTCACCAACTCGTATGCCCTGAAAGATCACAAGGCAACGCATGCGCGCTCCGCTCAGAACTTCAATTGTATCCAGTGTGGATCCGCCTTTACTGAAAACCGGTTCCTAAACCGCCATCTGTCCGTGGTTCATAGTGACATACCTTGCTTTGCCTGTCCCTTCTGTGAGAAGATATTCTCTCACCAGAAGGCGCTGCGCACGCACATCCTGATTCACGCAGGCGTGGCCTATCTGGAGTGTGCGTCCTGTTCGATTAAGTTCGTGTCGAGGACGAGTTTACACGATCATTTGGCCGCGGAACACGCGATCTCCGTGAATCACGAGTTCTACCACGCGAGCTTTATCTCACTTGAACCAGAACAGGTGGGCCTAGTCATGCCAAAGTTCACAGATGAGGAAGTACTAAATATGAGTAATCAGGAGAGAGATGAGGTGATGAGAGACTATTTCAATCAAGTCATTGAGGGCAAGATAGAGCTGGAAACCCAGTTCGAGTTCAAGCTCATTCAGAGGAACCGCGCCCCCGTGGACCCGGACAAGAAAGGCCTCATCGCCAAACTAAAACAGGAACAACGTAAATCTCGCCCCCCTCCTAAGAAACGGGGTGGTAAGGCAGGCGGGGTGGGGGATTGGGGCCcggggaggagaaaagggagaggagggaagagagggaggagagaggagggggaagggggAGGACATGACTATAACTTTAGAGCCAACTACCCGCGGACCATTATGAGTGaggattatgattatgaaaatGAGCAGGAGGACTACAGCGAGGATCACGACAATTACGATGCCCCCAGTGTTCACGAAACCTCCGTGATTAATCTATCCCTGCGCAACCCATCCAACCCCACTAGACGAAGACAGAATAGTGGACATGAGAGTGGAGgtgaagaaatggaggaagaggaagaggaggggcaGATGCCAGTGGAAGCGTTTGTACAGGCGGAGATAGAAGagagtgaggaggaggaggaggagagggagGTTAAGATTCCCGATCTGGCTCAACTATTGTGTATTTGTAATGTCTATTTACCCCCTCATATGCAATATTCCGAAGCGGACTTAACCAACATAAAACAACAGCTCCCTTCTCCCTTCATCATACTAGGTGACTTCAATGCCCATAATCAGTTATGGGGCGACACTAGATTGGATGCGAAGGGTAAAGAGGTTGAAGCCTTTATTTTAAATCATAGTAATGTTCATTTGTTGAACTCCGGGAGTGCTACCCACTTCAATCTTTCCTCTCTTACGCATTCTTCCATTGATTTAACCTTCGCTTCTACGACTATATTTCCTGATATAAAATGGCTGGTCACAGATGATCCCCATTTCTCTGACCATTTCCCAATAGCCTTGTCATATGATAAACCCTTGTCTAGTTCTTCCCAATTGTCGTCTCCTGCTCAGAAGATATGGAATTATGGCAAGGCTAATTGGGAGATGTTCAGATCTAATATCAATTTCGACTTTACTATTGACCTGGATAATGATGACCCGAATTATGTTGATGATATATTGAATCAAATCAATGTTAATATTCTTAATGCGGCCAATGCGTCAATTCCCGAGAAGTTTATACCTATCAACAAACTTCCTGTTCCCTGGTGGGACGAAGATGTAAAGTCTCCTGTGATTCTTATGCCCGCGTTATGA
Protein Sequence: MEASSSSGSATANPVQSCSMCPDKFLSNDKLVLHYVINHKYHICEVCTTVTSTLDDLKNHESETHLPLKCEICCYQITELSELTTHRATSHQLLTCHFCPLTLNTMFELNFHLKRKHFVLVEPLNLDQGLFKDFSMGKWGYLCLLCGKNRETSGFIGHYRGFHRIRVPTLAKILLKQNITPLSIMGTLGPEEEADHTKDLPDIDHTTHQPYANVTNTCNDSGQRQYQADVDLANIDGNMTSGSSQQTCIGVPKVEYPCHQTLIVPKVPETYLQTVYQMNAHMNQTLPVPSAICHQTRAIPNVSAPNAHELHIPNLSENDMGGPHETHVADNAMSSNICQQYTGVPAKHDFHSTLQPGVGVPNPSSHTYQIQSATNELPADPLKPEPIENKHSVASEGTRACGNIANQLTNEERLNYMPQYNRVPCDNPVNIRQGGNMGERLDMSGYPHQSVITNARGSAVHQPSNVVPSHLTHQLDSSHLVDNIQTSQLPNQISGTPYSSQSGDPNHSDTPYACQLSSNANQISRPPYGTDSSDNTGAMLPSQSYPGVVVGAYSEGLDGSGSQNIGHDVKYRSELSGGSGSQNTGSIPQYSSDLGADSGSQNIDSKMAYSAGLDGSQDTAGGNASGGDSLLYSMLLQGNRNPEESLEPPVVRQPTQDNSAATSPTSPTLPPDLSVSREDKFSSEPEDTSDEESTSSRRDGGMSSGYYVAGTSKPLATTDPRLYEDFDDVEPEVDPNDVECVLTETSDVESVTQEEEEEEGEGGEGEGSGSEKLMTRLYNMAMQGGTVSQVNTSDDSDVKQDCPDNIPKKLGKYLVLNNLVICSKIGLNQMEHAPNGFRCEVCHGYFDSREGLKELLRHMRTLHGIKCNKDTRHLSSVFDNFGRIKMTSYPEYCGPIHVCPFCSLRASSKRFLRRHVFTFHGDTWLLDAPAGPLSYACGQCKRSFWHMRERDVHEMSEHEDVSPLRCHICVRPFLRKVLVNEHIRLSHPEENGMHGCVSYKCRSCDILLADYTSLESHVKTEHNHNTVYRCSHCDLGLKNMKSLRYHIKMQHGKASQTFECELCGRVTYSLRSLNSHRRLKHDSAHRALFKCRLCSDTFETKDERQLHYAKQHVNQNPFICPDCGKGFASKSGLYGHRQVHKVQENFFKCQFCGKEFTRRDSYNEHLLIHMGPRHKCPHCNKDFVQRSNLVRHIRIHTGEKPYKCTHCDKTFSDKGACNSHIRVHTGEETCACPFCGQTFSKKQKLKYHVRKHTGEGLLECDICNKTFTNSYALKDHKATHARSAQNFNCIQCGSAFTENRFLNRHLSVVHSDIPCFACPFCEKIFSHQKALRTHILIHAGVAYLECASCSIKFVSRTSLHDHLAAEHAISVNHEFYHASFISLEPEQVGLVMPKFTDEEVLNMSNQERDEVMRDYFNQVIEGKIELETQFEFKLIQRNRAPVDPDKKGLIAKLKQEQRKSRPPPKKRGGKAGGVGDWGPGRRKGRGGKRGRREEGEGGGHDYNFRANYPRTIMSEDYDYENEQEDYSEDHDNYDAPSVHETSVINLSLRNPSNPTRRRQNSGHESGGEEMEEEEEEGQMPVEAFVQAEIEESEEEEEEREVKIPDLAQLLCICNVYLPPHMQYSEADLTNIKQQLPSPFIILGDFNAHNQLWGDTRLDAKGKEVEAFILNHSNVHLLNSGSATHFNLSSLTHSSIDLTFASTTIFPDIKWLVTDDPHFSDHFPIALSYDKPLSSSSQLSSPAQKIWNYGKANWEMFRSNINFDFTIDLDNDDPNYVDDILNQINVNILNAANASIPEKFIPINKLPVPWWDEDVKSPVILMPAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443200;
90% Identity: iTF_00443200;
80% Identity: -