Basic Information

Insect: Diaphorina citri
Gene Symbol: -
Assembly: GCA_000475195.1
Location: CP125325.1:6303832-6312501[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00021 0.019 16.8 1.3 2 23 222 244 221 244 0.96

2 23 0.002 0.18 13.7 1.4 1 23 269 292 269 292 0.96

3 23 4.9e-05 0.0043 18.8 0.3 2 23 299 321 298 321 0.96

4 23 0.016 1.4 10.9 0.2 3 23 376 397 376 397 0.96

5 23 0.0053 0.47 12.4 0.1 1 23 474 497 474 497 0.92

6 23 0.029 2.6 10.1 0.2 2 23 504 526 503 526 0.91

7 23 0.26 23 7.1 1.4 1 23 533 555 533 555 0.97

8 23 0.17 15 7.6 0.3 3 23 611 632 611 633 0.96

9 23 0.015 1.4 11.0 0.3 1 23 644 667 644 667 0.93

10 23 0.003 0.27 13.2 0.2 2 23 674 697 673 697 0.92

11 23 0.098 8.6 8.4 0.1 2 23 706 728 706 728 0.93

12 23 2.1 1.9e+02 4.2 0.1 2 23 735 757 735 757 0.95

13 23 0.00081 0.071 15.0 1.3 1 23 764 786 764 786 0.96

14 23 7.3e-05 0.0064 18.3 1.4 1 23 835 858 835 858 0.97

15 23 0.0015 0.14 14.1 0.7 2 23 865 886 864 886 0.95

16 23 0.0025 0.22 13.4 3.7 1 22 906 927 906 927 0.94

17 23 0.022 2 10.5 3.2 1 23 947 970 947 970 0.96

18 23 4.2 3.7e+02 3.3 0.2 10 23 984 998 983 998 0.90

19 23 7.7 6.8e+02 2.5 2.1 3 23 1040 1061 1035 1061 0.91

20 23 0.32 29 6.8 0.2 3 23 1127 1147 1125 1147 0.95

21 23 0.011 0.95 11.4 3.0 1 23 1185 1208 1185 1208 0.94

22 23 3.8 3.4e+02 3.4 1.3 3 20 1217 1234 1216 1236 0.93

23 23 1.2 1.1e+02 5.0 5.3 1 23 1370 1392 1370 1392 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00021	0.019	16.8	1.3	2	23	222	244	221	244	0.96
2	23	0.002	0.18	13.7	1.4	1	23	269	292	269	292	0.96
3	23	4.9e-05	0.0043	18.8	0.3	2	23	299	321	298	321	0.96
4	23	0.016	1.4	10.9	0.2	3	23	376	397	376	397	0.96
5	23	0.0053	0.47	12.4	0.1	1	23	474	497	474	497	0.92
6	23	0.029	2.6	10.1	0.2	2	23	504	526	503	526	0.91
7	23	0.26	23	7.1	1.4	1	23	533	555	533	555	0.97
8	23	0.17	15	7.6	0.3	3	23	611	632	611	633	0.96
9	23	0.015	1.4	11.0	0.3	1	23	644	667	644	667	0.93
10	23	0.003	0.27	13.2	0.2	2	23	674	697	673	697	0.92
11	23	0.098	8.6	8.4	0.1	2	23	706	728	706	728	0.93
12	23	2.1	1.9e+02	4.2	0.1	2	23	735	757	735	757	0.95
13	23	0.00081	0.071	15.0	1.3	1	23	764	786	764	786	0.96
14	23	7.3e-05	0.0064	18.3	1.4	1	23	835	858	835	858	0.97
15	23	0.0015	0.14	14.1	0.7	2	23	865	886	864	886	0.95
16	23	0.0025	0.22	13.4	3.7	1	22	906	927	906	927	0.94
17	23	0.022	2	10.5	3.2	1	23	947	970	947	970	0.96
18	23	4.2	3.7e+02	3.3	0.2	10	23	984	998	983	998	0.90
19	23	7.7	6.8e+02	2.5	2.1	3	23	1040	1061	1035	1061	0.91
20	23	0.32	29	6.8	0.2	3	23	1127	1147	1125	1147	0.95
21	23	0.011	0.95	11.4	3.0	1	23	1185	1208	1185	1208	0.94
22	23	3.8	3.4e+02	3.4	1.3	3	20	1217	1234	1216	1236	0.93
23	23	1.2	1.1e+02	5.0	5.3	1	23	1370	1392	1370	1392	0.97

Sequence Information

Coding Sequence: ATGAATAAGTACAGTGAACTGTGTCGGCTTTGTGCCACCTACCAGACAGCCAAGATTGACATCTTTAGTGACAATGGCAAGAAACGGAAGTTGAAGGAAAAGATTCATTCCTGTCTACCTCTACAGATATCGGAAACTGACAACCTCCCTCGATATCTGTGCTTCAAATGTGTGTTCAACCTGGACAACTTCTACACATTCCGGAGGAGTTGCGTGGAAGCCGTCAACATGTTGAAAGTATTTGCTGCCCAAGCAATGGAGTCTAAAGTGAAGGCCCAGCAGTCTCAGGCAAATGCTAATACATCTCTGTCAATGGTTCACAACCTACTTCCTCAGGTATCAATCACATTGAAAACAATGGACAATGAAGACATGTCAGAAATGCTGAAACCTGAAGTGGTTCTCTCCAATGGGAATGAAAACGGGAACAGTCTCACGGTAGAAGCTATCAACGGAGATgaggaggatgagagagaggagaaggggagagaggaagaggaagatgatgatATGAATTACCCGATGAATTTCCTTGAGCTCAATGTGGAGCCGCAGGAAGATAGCAATGATCACTCAGCTAATTCTCCTAACGTCCAGTACAAGGAGGAGCACAACGGCGAAGTTAGAGGAAGTGGTAGTGGATCTTCATCTCAGGAAATGCTCCAATGTCCACTATGTGGTCAGAGGTTCCCTACCCGCACTCATCTACTACTGCACACATCGACACAACATGGACTGCCCACCTTCATGGGGGACGACTCGGTGGAGATTACACCGCAGATCAATACTCCCCCTGCGAGACCTCATTCGTGTGACCTCTGTGGCAAGACGTACACCCTGGCTAAACACCTTTGGGGTCACGTGAAATCTGCACATCAGGGTCACCCCTCCGTCACGTGTAATGTATGTGGTCGTACGTTCTCATCCATCGCGAACCTAGCCGAACATAAACGATCACGACATGGCAGCACTGGTTCCAATTCAGACTCCAGCCCGCCCAACCCTCTCAAGCGTGCCCTGGAGGCGGTCATGATGTCCGGCCCTGCTAAGGTGGCCCGTAGTGACCCCCAGACCCCTGACAATAACTCCGCCCCTGGTAGTAGCAATAGTGGCGGAGCTAAGGGGTGTATGTTGTGTACGCAGCGGTTCCCAAATGTAGACCAGCTGAATGCACATATTCAGAGTGAGCATGGGATTGACCCGACTCAGCTGGGTATAACCCCAATTTCGCCGGAGCCCAAACCCTCTCGCCCGTCTACTCCCAAGGATTCTACCCCAAGCACCAGTGGCGCGCCAAGCGGTGGAATGCCTGCACTACACCTAGCGAGTCCTAGCGCTATACAAGCGCGACATCTGACCAGCCCTAACTCTAGCGCTACGGGAAACCCTATGATGgtTGGTAGTGATTTCGACTCGGTGTTCGCATGCGAGATTTGCACTCGAGAGTTCGGGGATCGAGCCTCGCTGTGGCTGCACATGGTACATGGTCACAAGGAGGAGGCAGCGCTATCGTGCGGCAACTGTCTGAAGGTGTTCCGAGATAATCTGAGTCTTCTGAAACATGTGGAAGAGGAACATCCGACTATGCAACGCCGATACTCGTGTCAGGTATGCGGTAGACAGCACGATTCTCGTAAGAAACTCATGAAGCATGTCGCTATACATAACCTTCATGACCAGTATGGTAAACCTCTAGATCCCGGTACCATGATCAATACGAATAACCAACCCCGCCGTACCCCAGCCTTCAATACACCCCCACCTGCCCCTCCCACGACCCGCCCTGTACCACCCCTGTATAGCCCTGGGGATAAGAGTTTCGCCGTGGGGTGTCAGCTGTGCGCCAAGCTATTCCCTAGTGAGGACGCACTGCTCAAACACATCAGTGTGATGCATCATGCGACCGCGCCTGCCACCCCTAGCATGCCATACGCGTGTGAACTATGCGGCGTGACCTACACGACGAGGACAGAACGGTGGAACCATATGTTCCAAGAACATGGCGGTGATGAGAAGATCACGTGTCCTCAGACGCAGTGTGGTAAGGTGTTTGTATCGAGTGTTCTGTTACAGGAACACGCTGCCCACCATACAGAACAAGGGGACTATCCCAATACTTGTGAGATATGTGGTAAGATGTGGAAGTCTCGGGTTGAATACTTCAAACATGTCATGGGAGTACATCCCTACTGTTTACCGAACGTGTGTGGGATCTGTCTGAAGATATTCCTTAGTGTAGCAGACCTCAGGGAGCATGTGAAGAGCAAGCATTGGCCATTGGATAGTGATCATTCATGTGATGTATGTGGACGTGCCTATACTAAGAGATCCAAGATGGCGCGTCACAGGGAGATACATAACGTGACAGACGATATCCCCTTACCTTCCATGTATAGGGTGTTCAAACCGAAACCAGACGACATGAAGTGTGAGCTATGTCCTGATCTACAGGTTGATACCATGGAGGCTATCAAGGAGCATAGGAAGACAGAGCatgctatgtatgtatgtgacCTCTGTCCCAAGTATTATAGTAGATCCACACATCTATGGAAACATGTGAATCGCGTACACAAGGGTCATCCTGATGTAACATGTCGTATATGTTCTAAAGTATCCTCCTCACGAGGACACCTCGAGAAACATCTGATAGCCCATGATAATCCCAACACAGAGGTGGATGAACCCCAGATGAATGAGTTTGGGGAAAGTGTTCACATCTGTCACCTGTGTCAGAAACAATTCAAACAGAACTGGCTCCTACAGAAACACAAGAAGACATGCAAGGGTCCCAAGCGTCCTACATCCCCCCTACCAGAACCTGATGAGGATGGGATCTTCCGGTGTAAGAAATGTGTGAAGGTGTTTGTGAATCCGGATATCTAtaagaaacatttgaaacattCCCATACGAAAGCATACTGTGAGGTGTGTATCACTGCGCCAGGTTATGAAACTAAGGTGGAACTGTTGCATCATATGAAAACAGAACATAAGGATAATGAGGAGTACAAGTGTTTGATACCAGGATGCAAGAAGTATTTCCGTACCAAGCTAGACTGTCAGAAACATTGCCGTGAGCACAAGACTGTGACCTCACGCTGTCCTACCAACTATTGTAACTTCTGTGCAGATCTATTCACCAATAGGAAGAAGCTGTGGCTACATCTGAAATCCACTCACAAGGATCTGACAAACTGCATGTGTTCTGCATGTTTTGTAGTGGAAGATAATCTGAGCGCGTTGGAAGCACATGTCGCTGCTAAACACAAAGCCATCATCAAGAAACCATACGCATGTCGTATCTGCGCGCGGTTGCTAGGTAACGGTGTCAAGGTATCTGAACATATCAAACTCCATGGAGAACATCTGGTGAACTGTAGAGTATGTGGTAGTATATTCCATTCGGAACCAGAGCTCAAGGTTCATCTAGAAGAGCATACAGACGTCCCAGAGACCAAGGAGCAGAAGCCACGTCCAGAACGTAAGTCAGTCACCCCTGTAGAGACTAAGCCAGAGGAGTTACTTGTGTCTAAGAGACTAAGAACCGTCCACACGTGTAACCTTTGCCACCGTACATTCCGTGTCATGGGAGATCTACTCAAACACAAAGCGTCCGAGCATGATATCCCTGTGAGTGGAGAGTTCTGCTTTACATGTGATACACAGCTTGTATCCCCCGACACATTGAAGACACACAAGTGTGAAGTGCTGAACAAATCCAATGAAGATCTGAATAGTAGTGAGGAGTTGAATGATTCCGGTAGCTCTGGGACCGGGGGGCGGCAGAGGCGTACCTGGGGAGACGATAATGATCCCGTCACGTGTGATCTATGCAGTAAGGAGTGGCCGAGCCGTAAGTTCATGTGGCAACATCTGATCCGATCCCACAAGGCAGTGGCAGGCCTGGCATGCGGCGTGTGTCTCAAGATCAGTGAAACCTATGAGGCCCTGGCGTTACATCTGGACCAGGCACATCCGGGCTACTTTGCTGAGGAAGTAGATAACCCGACGTGTGAGGTGTGCGGGAGATATCACAATGCTCGTCCGAAACTCGAGTCTCACCTGGCTGTCCATGTTGGATTAGACAAGAGTCAAACACTTCTACACAAGTGTAGCGCGTGTAAGTTTGTATGTCGTACTGTGACTTATCTGAAGAAGCATGAAGCAACACATgatggagaggaaggagaggaggaggacgaggaaacAATGGAGGTGTtggatgatgatgatattgatgaagAGGATAtcgaggatgaggaagaggaggaggatgagttAGATGAACTGGATGAGAAGGTGGGgagtgaagatgaagaggaggatgaggaagatgatgatgaagatgatgaaacGAGTGTAGATACGAAGAATAGTGATAACTGA
Protein Sequence: MNKYSELCRLCATYQTAKIDIFSDNGKKRKLKEKIHSCLPLQISETDNLPRYLCFKCVFNLDNFYTFRRSCVEAVNMLKVFAAQAMESKVKAQQSQANANTSLSMVHNLLPQVSITLKTMDNEDMSEMLKPEVVLSNGNENGNSLTVEAINGDEEDEREEKGREEEEDDDMNYPMNFLELNVEPQEDSNDHSANSPNVQYKEEHNGEVRGSGSGSSSQEMLQCPLCGQRFPTRTHLLLHTSTQHGLPTFMGDDSVEITPQINTPPARPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGSTGSNSDSSPPNPLKRALEAVMMSGPAKVARSDPQTPDNNSAPGSSNSGGAKGCMLCTQRFPNVDQLNAHIQSEHGIDPTQLGITPISPEPKPSRPSTPKDSTPSTSGAPSGGMPALHLASPSAIQARHLTSPNSSATGNPMMVGSDFDSVFACEICTREFGDRASLWLHMVHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVCGRQHDSRKKLMKHVAIHNLHDQYGKPLDPGTMINTNNQPRRTPAFNTPPPAPPTTRPVPPLYSPGDKSFAVGCQLCAKLFPSEDALLKHISVMHHATAPATPSMPYACELCGVTYTTRTERWNHMFQEHGGDEKITCPQTQCGKVFVSSVLLQEHAAHHTEQGDYPNTCEICGKMWKSRVEYFKHVMGVHPYCLPNVCGICLKIFLSVADLREHVKSKHWPLDSDHSCDVCGRAYTKRSKMARHREIHNVTDDIPLPSMYRVFKPKPDDMKCELCPDLQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPERKSVTPVETKPEELLVSKRLRTVHTCNLCHRTFRVMGDLLKHKASEHDIPVSGEFCFTCDTQLVSPDTLKTHKCEVLNKSNEDLNSSEELNDSGSSGTGGRQRRTWGDDNDPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCSACKFVCRTVTYLKKHEATHDGEEGEEEDEETMEVLDDDDIDEEDIEDEEEEEDELDELDEKVGSEDEEEDEEDDDEDDETSVDTKNSDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -