Dcit027844.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- Zfy2
- Assembly
- GCA_000475195.1
- Location
- CP125330.1:2149804-2154792[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.013 1.1 11.2 2.3 1 23 290 313 290 313 0.96 2 10 1.1e-05 0.00097 20.9 0.9 3 23 323 344 322 344 0.98 3 10 1.3e-05 0.0011 20.7 0.2 1 23 379 402 379 402 0.94 4 10 1.3e-05 0.0011 20.7 4.5 1 23 411 433 411 433 0.98 5 10 1.7e-05 0.0015 20.3 0.8 1 22 439 460 439 460 0.96 6 10 0.0012 0.1 14.5 0.8 1 23 735 758 735 758 0.98 7 10 0.0035 0.31 13.0 2.1 3 23 767 788 766 788 0.97 8 10 5.7e-07 5e-05 24.9 1.7 1 23 824 847 824 847 0.95 9 10 1.3e-05 0.0011 20.7 4.5 1 23 856 878 856 878 0.98 10 10 8.7e-05 0.0077 18.0 0.9 1 21 884 904 884 905 0.95
Sequence Information
- Coding Sequence
- ATGCTTTGTAGCGACAGTTTCCTTAATCTTATGCCGGCAATTCACGCTCAGTGTGTCTGTCAGGCGAACCTGAGATTCCTCGGCCGAAAGGCCCCAGATAACGATACAAGCTCAAGTGACGAAGACCCCTCGGACCGTCACCCTTCGTCCGTAAAACAGGAGTCCGCCACCCATCCAGTCAATCACCACGCTCAACCGCACTGCGAAGGAAACTTTTTCCGTACGGCCGAAGATTCAGATATTGAAGATGATAAGATTACAACCAGTGGGGGAGATGGCGTTGGCGAGCTGGTCGTCAAGAAGGAAACAGACGCGACGGATGAGTTGGATGAGGGAGAGTGGGAGAACACAAGGAAGCCAAGTCGCTCCAAGTCCCGGTCCTCACTGGAGTTGGTACTTAAGAAGAATTTGGAGTTAATGACGTCAAACGTGAAGTCCAAAAGCCGCATGTCCTATCTGAATATTATCTGTAAGAATTTGAATAAACCCAACACGGAGGATATGTGTCGGGAGGAGACGCCACCCCCAGCGGATGTGAAAACGGAAGATAACGCAGACGATGAGGATTATGTGGTGGAGACGAAACCAAAGaagcgaagaggaagaaaaccgAAACAGGAGGGTGAGAAAGCAACGCCCAAgcgagggaagaaagagaagggagaggggaagaggaagaaagaaacacCGACCAAActggcgaaggagaagaagaaagtaaagaaagaggcAGTGAGTGGTGTTGAAGATCAGAGTGGTGTGGATGATACAGACTTTGACCCGAGGGATTTCCTGGAGACAAGCTCAGACGAGGAGAGTGAGTGGAATAACGAGGACTATAACGCGTTCTTCGATCAGACGATCGACTTCAAGTGTCGCTTCTGTGACGACCAGTTTAAGACGAACGACAAGTTGCTCCGCCACTACAAGGCGATCCATAGTCAGACGCTGGAGACCAGTAGCCTGTGCCCGTACTGTGGCTACACCACTAAGAGTAAGGCCATGCTGAACCGTCACATCCGGCGGAAACACATGAACATCACCAAGGAGAAGGTAAAGCAGGTGTGTGAGATCTGCTCGGCCGAGGTGTACCATCTGGCGGTGCACAAGCGAAGCTTACACGCGGGCCTCTCCTTCCCTTGTCCGTACTGTGGGAAGACATTCCCTCGCAAGGGAGAGCTCCAGTTCCACATCAAGGGCATTCATCTGAAGCATCAGCTAGAGAAGACGTACATCTGTGAGTATTGTCACAAGGAGTTCACCTTCTACAACTACTTGCGTCGGCACATGCGTGTGCATACCAATGAGAAACCTTACAAGTGTAAGGACTGCGGGGTTGGTTTCAATCATAATGTCTCTCTCAAGAACCACATGAACAAGTGCGCCAAGCGAGAGATCAACATGAACACGAACTCTAATGCGTCAAACTCTACCGTAGCGTCATCTCCTGTCGTGCGCAATGTACGCAATGCGGCTCCGGCCACCGCACCACTACCGGCGCGTAGCTTAGGCCCCGCCCCTCCTACTTCTGTACCCAATACGGTTAATCTGATGAGCGAGGACTATGATGATGACTGGAATAATCTGGACGACCACGTCGGCAAACCTTCCCGCAGACGATCCCTTGGTGTCGAGTCGTCCGTGCCGAAACTCAAAATTAAAACGGAAACCGACGACAAATCCTGGGAGGACAAGAGTCTGCTTGAACCCGAGATCAAGATAAAAGTCGAACGGGGGCAAGCGACCACGAGTGATGAGACCGAGGAAGATGACAACACGAGGCAGACCAGCTTCAAGACGATTATCTCCAAATATGTCGGATATAATATAGACGATCTGAACACGATAGATAAGAGAGCGAAGCGTACCGCGCGGGCCGCCAGTAGCGGGAGTGATACGCCGAAGAAGCGAAGAGGCAGGAGTAGAAGCAAGGGGAGAGATGCTCCGGTGAGCAGGAAGAGGAATAGAAGAGCCAAGACACCAAGCCAGGAAGAGACGGACGCCAAGATACTTCAACAGCAGAAGAACTtggagaagaagattaagaagatggcgaaggaagagaggagaaggaagattgATCTGGATAAGAAGCCGAGTGACATGGACAATGTGTTTGCTAGTCTGGATGAGATGTctagtgaggaggaggaggaggaggattggGATGAGGTACATCTGGGACAGTTCAGCCCGTACGAGTTCAAATGTCGCGTGTGTGACTGGAAGCTCAACTCCTATGATAAACTCCTGCGGCATATCAAGTCAGACCATGGTGGTTATGAAACGTCAAGTCTATGCTACCACTGCGGCTATTATTCTAAGAATAGAAGCACGCTGAAGAACCACGTGCGTGTCGAACATGGCGAGAACCAGGCGAaacgaaaggagaagaagatctgTGATATCTGCTCGGCGGAGGTGGTGCATCTCGCCATTCATAAGAAACACTCGCACAGTGGCCAGTACCATGTGTGTCCACACTGTGGCAAGAAGTTCACACGGAAGGCAGAGTTACAGCTGCACATCAAGGGCATTCATCTGAAGCATCAACTGGAGAAGACGTACATCTGCGAGTATTGTCACAAGGAGTTCACCTTCTACAACTACTTGCGTCGGCACATGCGTGTGCATACCAATGAGAAACCTTACAAGTGTAAGGACTGCGGGGCCGCGTTCAACCATAATGTTTCTCTCAAGAACCACAAGAACTCATCCTGTCCGAAGCGTGACATGACGGCAGCACCGCCCGCACCCCGCCGCACCGAGTCCAACACACGGCACTCCCATCTGTCGTCAAATTCGACCAGTCCCTCGCACAATGGCCCTGTGGACCTCGGACACAACCCGGCCATGCATAGCGCGCCGACCCTGGCGACTAGTAGTAACGTGAGGATACCCAAGTTTGACAGGCGGCAACATCAGAGGTCCATGATGGAAATGATTCAGAACTCGTCGAATATTGCGACCAATGTGCCGTTCCCAGCGGTGTTCGATGCGGCCCATATGTACTATTATGGTTAA
- Protein Sequence
- MLCSDSFLNLMPAIHAQCVCQANLRFLGRKAPDNDTSSSDEDPSDRHPSSVKQESATHPVNHHAQPHCEGNFFRTAEDSDIEDDKITTSGGDGVGELVVKKETDATDELDEGEWENTRKPSRSKSRSSLELVLKKNLELMTSNVKSKSRMSYLNIICKNLNKPNTEDMCREETPPPADVKTEDNADDEDYVVETKPKKRRGRKPKQEGEKATPKRGKKEKGEGKRKKETPTKLAKEKKKVKKEAVSGVEDQSGVDDTDFDPRDFLETSSDEESEWNNEDYNAFFDQTIDFKCRFCDDQFKTNDKLLRHYKAIHSQTLETSSLCPYCGYTTKSKAMLNRHIRRKHMNITKEKVKQVCEICSAEVYHLAVHKRSLHAGLSFPCPYCGKTFPRKGELQFHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGVGFNHNVSLKNHMNKCAKREINMNTNSNASNSTVASSPVVRNVRNAAPATAPLPARSLGPAPPTSVPNTVNLMSEDYDDDWNNLDDHVGKPSRRRSLGVESSVPKLKIKTETDDKSWEDKSLLEPEIKIKVERGQATTSDETEEDDNTRQTSFKTIISKYVGYNIDDLNTIDKRAKRTARAASSGSDTPKKRRGRSRSKGRDAPVSRKRNRRAKTPSQEETDAKILQQQKNLEKKIKKMAKEERRRKIDLDKKPSDMDNVFASLDEMSSEEEEEEDWDEVHLGQFSPYEFKCRVCDWKLNSYDKLLRHIKSDHGGYETSSLCYHCGYYSKNRSTLKNHVRVEHGENQAKRKEKKICDICSAEVVHLAIHKKHSHSGQYHVCPHCGKKFTRKAELQLHIKGIHLKHQLEKTYICEYCHKEFTFYNYLRRHMRVHTNEKPYKCKDCGAAFNHNVSLKNHKNSSCPKRDMTAAPPAPRRTESNTRHSHLSSNSTSPSHNGPVDLGHNPAMHSAPTLATSSNVRIPKFDRRQHQRSMMEMIQNSSNIATNVPFPAVFDAAHMYYYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00443143;
- 90% Identity
- iTF_00443143;
- 80% Identity
- -