Basic Information

Insect: Diaphorina citri
Gene Symbol: -
Assembly: GCA_000475195.1
Location: CP125333.1:45775508-45781136[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.9 7.8e+02 2.3 0.1 2 23 5 26 4 26 0.94

2 14 0.37 32 6.6 2.1 3 23 1339 1360 1337 1360 0.90

3 14 0.03 2.6 10.1 0.4 2 23 1428 1450 1428 1450 0.96

4 14 2.6e-06 0.00023 22.8 0.2 2 23 1453 1474 1452 1474 0.97

5 14 2e-05 0.0017 20.1 0.9 1 23 1480 1502 1480 1502 0.99

6 14 3.6e-05 0.0032 19.2 2.5 1 23 1508 1531 1508 1531 0.96

7 14 0.12 11 8.1 0.9 5 23 1543 1561 1541 1561 0.97

8 14 0.00011 0.0098 17.7 5.2 2 23 1567 1589 1566 1589 0.97

9 14 0.063 5.6 9.0 0.2 3 23 1607 1626 1605 1626 0.95

10 14 0.0018 0.16 13.9 1.3 1 20 1632 1651 1632 1654 0.91

11 14 7.4e-05 0.0065 18.3 2.2 1 23 1662 1684 1662 1684 0.99

12 14 0.0016 0.14 14.1 4.8 1 23 1690 1712 1690 1712 0.98

13 14 1.6e-06 0.00014 23.5 2.4 1 23 1718 1740 1718 1740 0.98

14 14 0.0052 0.46 12.4 8.6 1 23 1746 1768 1746 1769 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.9	7.8e+02	2.3	0.1	2	23	5	26	4	26	0.94
2	14	0.37	32	6.6	2.1	3	23	1339	1360	1337	1360	0.90
3	14	0.03	2.6	10.1	0.4	2	23	1428	1450	1428	1450	0.96
4	14	2.6e-06	0.00023	22.8	0.2	2	23	1453	1474	1452	1474	0.97
5	14	2e-05	0.0017	20.1	0.9	1	23	1480	1502	1480	1502	0.99
6	14	3.6e-05	0.0032	19.2	2.5	1	23	1508	1531	1508	1531	0.96
7	14	0.12	11	8.1	0.9	5	23	1543	1561	1541	1561	0.97
8	14	0.00011	0.0098	17.7	5.2	2	23	1567	1589	1566	1589	0.97
9	14	0.063	5.6	9.0	0.2	3	23	1607	1626	1605	1626	0.95
10	14	0.0018	0.16	13.9	1.3	1	20	1632	1651	1632	1654	0.91
11	14	7.4e-05	0.0065	18.3	2.2	1	23	1662	1684	1662	1684	0.99
12	14	0.0016	0.14	14.1	4.8	1	23	1690	1712	1690	1712	0.98
13	14	1.6e-06	0.00014	23.5	2.4	1	23	1718	1740	1718	1740	0.98
14	14	0.0052	0.46	12.4	8.6	1	23	1746	1768	1746	1769	0.96

Sequence Information

Coding Sequence: ATGAATACTGTACAATGTCCAGTCTGTACATTGTACCTTCGAGAAGGTATAACATTGAAGGAGCATCTGGACACTCATCCCAAGGACAAAGTTATAGAAGCTTTGGTTTCATCTTCACAAGAAAAGGCAGCAAATGttgttaatcaatcaaatttCCAGAATTCTTACATCCAGTCACCGTTTCAGATTAACAACCATGTTCCAAATCCAATGCAGTTTTCTATTATCCAGCCCAATCCAGAGCAAATTCAAACAGCTCAAGGTGTATTTCTACAAAATGTCCTTCCCAATAGGAGATACATTGTATCTCACCCTGGCACCATCATCAAAGTTCCTCAACAAATATTGGGGCCTCCACACTATGGCTCACCCCAGTTACAAATCCCTGCCAGACCAGCTCAGCCTCATATCCTCACATCTAACACTCAGAATATCAATACTCAGGGAGGCCCTGCAATCATTTATTCTCAACTTCCCCAGCCTGTTCAAAATGTCCCCAATGTTCAGCAAAATGATCACTTCCAAAGCATTCAGAGCTTTGAAGTACCTCAACAACCTAATCATCAGACAACAGGGGTTGTTCCACATTCTAGTTCTATATCAACATCCATTACTTCAAATAATGGATTTTGCACCAATAGTCCTCTTCAACAGTTCAATAACCTCACCAACTCTATGCAGTCTAATAAATCCCTGGACTCGGAAATTCCCCTGAAGAACACACCAGTTCAAGGAGGCTCCAATACACAGGAATATTGCAATGCAAGCACTCAAGTATCAACAGTTGCTATTATTAACAGTGATACTAACACAAATGACCTTTGCCTTGTTGAAGAGCAATATCATGACAAACTGTATGAAGTTAAAGATGACATGGACAGCAATGAACAATATGAGTATTTTGATGAAAATCCTGTTTGTGAATTAGATCTTCATTATAATAGTCAATctgaagaaacagaaaataaaatgaaagaagaaccTGAATATTTTGAAGATGACAAATCCAATATTGACTCTTCAGCAGACTGTGATGTTGATAATCTTTTTCATGATGAGCATAGCAAAGAAATTGAACATCATTGCTCTGAggataatttaaatttatctacATGTAATGAAATGGAATCTGCCATTGTCAATCTTGACAACATGAACACAATTACTGATCAAATTGACTATGATGACTACTCATCTAATGACTTTGATGATGGATTAGAAAACCTGGGAGATAATGATGGGATATTAATTGAAGCTAAAATTGATATTGATGAAAATGATGTTACTTTGGATAGTGCCAATGACAGAGAGCAAATTAAAGAAATTGACTTGTCCAAATCGAACCTAAACAATGGAATCAAGAGACATATAAgttatgttcaaaataaaaacagaatcATTATTCCTTTTGTTACACAAAATACTTGTAATAATGATCAACAAACACTCTACAAAGGAAACCCCATGAGCAAACAGCATATTACCAACAATGGTATTATGAGAGAATCAAAagcaaaaaaatggtttgaggATAAAAGCAAAGACAGTATTTCACAGGTTACACATAACACCCACCATAATATCAATGTAGTTTGCAGTCCAAGAAATTTAGAAGATGAACAAAAAGCTTTCAATGACAGTGTTGTGAAAGAGTCAGAAGGACCAACAATCAtacaaatggaaaatgaaaatgaggcccatatttcaaaatttaaaaagaacACTCTTCATAGTTCTCATAAAGCAGTGCCAATGGTATtggaaaacaaacagaaaaatccTAATAATGTGGTAGAGACCGAAGAACAAAAGTCTAAACAGATTGGAACTGAAGTGAGTATTTCTCAAGTTAGGTACAACACTAATCACAATACACGTGAAGTGTCAAGCCCAATGAACTTGGAGAGCAAACAGAAAATTTCTAAAAAGAGTACAGTAATGGAGTTAGAAGAACCTAAAACAAAacgttttgaaaataaagtcaCAATTTTGCAAATTAAACACAAGACTCACCATAATACCCATGCAGGGCCTAGCCATATGGATCTAGGGAGCAAACAGAAAGTCTTCAATGAAAGAATTATTGTAGCATCTGAAAAATCCAGAGGAAAACAGATTGAGAATAGTAATAAAGTCAGCATTTCACCAGCTAGACACAATGCTCATCATGATACTCGTGAAGTGTCCTGTCCAATGGAGTTAGAAAGCAAACGTAAAGTTTTCCATGATAGAATTGATATAGAATTAGAAGAATCAAGAGCAAaccaaatagaaaataaaaaggaagtcAGTGTTTCCCATGTTCGACAAAGCAATCATCATAATGATCATGAAGCATCTAATCAAAGACTTTCGGAAATGAATCCAAAAAGTATCATTGGCAGTATTGTGATGAACTCGGAAGAATCAAgaacaaaacataaaaatgaaattagtaTTTCACCAGTAATTCATAAAACTCATCACAATACCCGTGAAGTGCCTGTTCAAATGGAtttggaaaacaaaaggaaaattttgaatgaCAGTGCTGTAATGGAGTTGGGAGAACCAAGAACAAAAcagattgaaaacaaaaatgaaatcagtATTTCACAAGTTCGACAACACAACACTCACCATAATACTCATGGAGTGTCCAGCCAAATGGATTCAGAAAGCAAACGGAAAATAGACAGTATCATTATAGAGTCAGAAgaaccaaaatcaaagaaacatAAACAGGAAAACAAACCATGTAGCAACAAGGTAGTCATGAACCTGAAACCTAGCTCATACTCTGTTCCAGTTGAAGGAAACATATCATATGAAATCCAAGAGGTGATGTATGAAATGAAAGCATTTGGCAATGTAAAGCTATCCGTACATAAGTTACATATTCCCACAATTAAAAATGAAACTTCAGAGGAATGCAGTAAAATGCAATCTTCTACTAATATCTATGATTATAAGACGCCCATGCCAAGTACAAGTAGCACACCCGATGTTGGTGTCCTCTTATCAGAAATAAAAACTGAACCAGGTGTAGTAAGCAAACCCATTACAGTCAACAAGGTTCCTAAAGTAGAAGACACAATACCAACATCTACCTCAAATTTCCTTGATTATAATGCTGCACAAAGAGGCAAGCAAAGAAAAACGGTGAAAATACTGAAGATCAAAAATGCTAAAACTCGGGAACAACCTGATGGTGCCCAAATGAACACTTCTAGTTCAAGTCAGCAAGCTCAGAGTAGTGTTATTCAACATCCAGTTAAAACTGAGCCTCCTCCTCCCTATGATACAAAGCATGGAATTCTATACTGTCAACCAGGGAGTTCTAAAACAAGTGCCACTAACCCTGAACCACCAAAGAACAGTGCAGGGAACTTTCTTGGAATAGATCTACCTTCCGTGTCTAACCTGCCTCAGTTGGACAGACCTCCAACAGTAGATATTACTCCCAGCAAGTATTTACCCACGAATCTGAACTCACCAAGTCTAGAGTCACCAATACAAGACTACAACTTTCTGGTAGCCAACACTAAACTAGACCGCTTATCCAACTTACATAATGGAGAATATGATAGTGTTGATACACCGCATTGGTTACTCAGAGGCATCAACATTCTACCTCAAGTCATAGAAGATGACCGGATATCTTGTGCTTCGCCCAAAACGCTCCTCAACTTGGATCACCAAACTTCGTTTGAACCAGATGACTCTGGGTCTACTTCTATCAACATGCAAACAGATGAAATGATGCCACCTAGAGGAGAGCTGTCAGGACAAGAGAGTCTGGAAAGTTCTGTATGGGGATACCAGGAAGACAATGGTGCACCCCAATATCATAGGCAATGGGATGAAATGGATCATGAAGTTATGGATAACATCTCTAATAGCAACTCTTTTCGAACTAAAATAGAAAAGATCGAGCCTATTAATTCACTGCCAGATAATATAAAAATGGAAGAATCTGTTTCTATCCTTCCCGTAATATCTAGCTTGGATATtgctaaaaagaaaaagcatGCCTGTATTTACTGTAAGAAAACCTTTACTGGATGGAAGTTGAGAAAATATCACATGAAAGCTGAACATCCTGAATTATTTAATGAACCTGAAACTATCAAACTATTAAGCAAAACACAAGCTTCAACGTCAACTGTGATATCAGAACCAAGCACCTCGTTTGTATCTCAAGCTGTTTGTCCTATTAAGTTTGAAAACTCGAATTCCTTTGGGACTCAGATTCAAGAATTTCTTCCTCCTAGCCTTACttcaataaagaataaacaACGCCGGTGTGACACATGCTCTGAAGTATTTGACAAGTTGAAGGATTATCAAGAACACATTAAAAACGTTCATCCTCTGCCATGTCCTGTGTGTAGTAAAACTTTCCCCAGTAAACCAAGTCTCACACTTCATATGCGTACTCACTTGAAGATCAAACCATACAAATGTGATGTCTGTGATAAATCATTTGTCACTGCCCAGAAACTTTCGGATCACAAGAACACTCACACAGGTAACGCTCCCTTCCCTTGCAACATGTGTGACCGCCATTTCAAACGATATTCCAATCTGGCTCAACACAAGAAAGTCATCCacttaaagaaaaagaaaatcaaagactTCTACTGTCATTGTGGTGAAATATTCCAGTCACGAGGAAAACTTTTGTGGCATCAAGAGACACATGCCACTGTACCAAAGCAATGTACTTATTGTACAGAAAAGTTTACTCATACATCAAGCCTCACCCGACATATTCGGAAGAATCATGATCCTCGTTACTTACCTGTtgatagaaagaaaacagaTGAGAATGTGAACTGTGATATCTGCAAAATAGTTGTCCTCAAATCTACTCTGAAATCTCACATGAGAATCCATGACAACGCCAAACCATTCTCTTGTACTGTATGCAAAAAGTCTTTCTATACAAAGTGGAACCTTGGCCTGCATCAGTGGACGCATGTCTCCCGGATGCACATGCCATTCAAATGTAAGTCTTGTAACCGTGGCTTCTACAGTTCTAGTGAATATCAAGCGCACTTGAGATCACATCGGAATATTCGCCCCTTCACATGTAACTACTGCGGTCGCAAGTTTATTAGGAAATTCAATTGTATTCGTCACGTCCGTGAACACGAGTTAAAGAAGAAGTACTCCTGTACAATATGTGGCAAGACATTCCATCGTAGCTATTATTTGACTGCACATGTTAGGGTTCACAATGGTGAGAGGCCATTCTCTTGTCATATCTGTGGTAAAACATCCACCACCAAGTCAAACCACAATAAACACGTGAAAACACATCATGCGCGGGAAACCATCAATACGGAAGGCTAA
Protein Sequence: MNTVQCPVCTLYLREGITLKEHLDTHPKDKVIEALVSSSQEKAANVVNQSNFQNSYIQSPFQINNHVPNPMQFSIIQPNPEQIQTAQGVFLQNVLPNRRYIVSHPGTIIKVPQQILGPPHYGSPQLQIPARPAQPHILTSNTQNINTQGGPAIIYSQLPQPVQNVPNVQQNDHFQSIQSFEVPQQPNHQTTGVVPHSSSISTSITSNNGFCTNSPLQQFNNLTNSMQSNKSLDSEIPLKNTPVQGGSNTQEYCNASTQVSTVAIINSDTNTNDLCLVEEQYHDKLYEVKDDMDSNEQYEYFDENPVCELDLHYNSQSEETENKMKEEPEYFEDDKSNIDSSADCDVDNLFHDEHSKEIEHHCSEDNLNLSTCNEMESAIVNLDNMNTITDQIDYDDYSSNDFDDGLENLGDNDGILIEAKIDIDENDVTLDSANDREQIKEIDLSKSNLNNGIKRHISYVQNKNRIIIPFVTQNTCNNDQQTLYKGNPMSKQHITNNGIMRESKAKKWFEDKSKDSISQVTHNTHHNINVVCSPRNLEDEQKAFNDSVVKESEGPTIIQMENENEAHISKFKKNTLHSSHKAVPMVLENKQKNPNNVVETEEQKSKQIGTEVSISQVRYNTNHNTREVSSPMNLESKQKISKKSTVMELEEPKTKRFENKVTILQIKHKTHHNTHAGPSHMDLGSKQKVFNERIIVASEKSRGKQIENSNKVSISPARHNAHHDTREVSCPMELESKRKVFHDRIDIELEESRANQIENKKEVSVSHVRQSNHHNDHEASNQRLSEMNPKSIIGSIVMNSEESRTKHKNEISISPVIHKTHHNTREVPVQMDLENKRKILNDSAVMELGEPRTKQIENKNEISISQVRQHNTHHNTHGVSSQMDSESKRKIDSIIIESEEPKSKKHKQENKPCSNKVVMNLKPSSYSVPVEGNISYEIQEVMYEMKAFGNVKLSVHKLHIPTIKNETSEECSKMQSSTNIYDYKTPMPSTSSTPDVGVLLSEIKTEPGVVSKPITVNKVPKVEDTIPTSTSNFLDYNAAQRGKQRKTVKILKIKNAKTREQPDGAQMNTSSSSQQAQSSVIQHPVKTEPPPPYDTKHGILYCQPGSSKTSATNPEPPKNSAGNFLGIDLPSVSNLPQLDRPPTVDITPSKYLPTNLNSPSLESPIQDYNFLVANTKLDRLSNLHNGEYDSVDTPHWLLRGINILPQVIEDDRISCASPKTLLNLDHQTSFEPDDSGSTSINMQTDEMMPPRGELSGQESLESSVWGYQEDNGAPQYHRQWDEMDHEVMDNISNSNSFRTKIEKIEPINSLPDNIKMEESVSILPVISSLDIAKKKKHACIYCKKTFTGWKLRKYHMKAEHPELFNEPETIKLLSKTQASTSTVISEPSTSFVSQAVCPIKFENSNSFGTQIQEFLPPSLTSIKNKQRRCDTCSEVFDKLKDYQEHIKNVHPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHHARETINTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443132;
90% Identity: iTF_00443132;
80% Identity: -