Dcit035350.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- zfy1
- Assembly
- GCA_000475195.1
- Location
- CP125332.1:9775920-9780320[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.66 58 5.8 0.3 1 10 2 11 2 21 0.85 2 22 0.016 1.4 11.0 2.2 1 23 27 49 27 49 0.97 3 22 1.2e-05 0.0011 20.7 2.8 1 23 70 92 70 92 0.98 4 22 0.0003 0.026 16.4 0.1 1 23 98 120 98 120 0.98 5 22 2.5e-06 0.00022 22.9 1.6 1 23 125 147 125 147 0.99 6 22 0.0069 0.61 12.1 4.4 2 23 156 178 155 178 0.96 7 22 0.61 53 5.9 4.2 1 23 250 273 250 273 0.96 8 22 0.64 56 5.9 0.1 1 23 283 308 283 308 0.93 9 22 0.0015 0.13 14.2 0.8 1 23 343 366 343 366 0.96 10 22 0.5 44 6.2 3.3 1 23 395 418 395 418 0.97 11 22 0.015 1.3 11.0 5.0 1 23 466 489 466 489 0.94 12 22 0.0007 0.062 15.2 0.9 1 23 521 544 521 544 0.97 13 22 4.6e-05 0.0041 18.9 0.9 2 23 572 593 571 593 0.95 14 22 0.17 15 7.7 1.1 2 23 602 624 601 624 0.96 15 22 0.56 49 6.1 1.6 1 23 629 651 629 652 0.95 16 22 0.035 3.1 9.8 2.8 1 23 681 703 681 703 0.99 17 22 0.00024 0.021 16.6 0.2 2 23 710 732 709 732 0.93 18 22 0.00056 0.049 15.5 1.1 3 23 740 760 738 760 0.98 19 22 0.0014 0.12 14.3 0.3 1 23 766 788 766 788 0.98 20 22 0.0039 0.34 12.9 3.2 1 23 794 816 794 816 0.97 21 22 5.1e-05 0.0045 18.8 4.3 3 23 827 847 825 847 0.95 22 22 0.0041 0.36 12.8 0.5 1 23 853 875 853 875 0.98
Sequence Information
- Coding Sequence
- ATGTACAAATGTCCTCACTGTTCTAAAGTTGTGGAAAATATCAAACCACATATGAACATTCACACTAAAAAAAGAACGTTTGTGTGTGAGGAGTGTGGGGCTTGCTTTCTACACAGTACCAGTTTAAGAGAGCACAAAGCTTCCCATTCCGATACCAGAACTAGACTTAATACACATTATCAAAGTGTTCATGAAAACATTCGGAAACATCAATGCATGTATTGTGGTCATGCATTCAATGAGAAATCTAATCTCAATGTACATTTGCGTATTCATACAGGAGAGAAGAAATATGTTTGCGAAGAATGTGGAGCTTCATTTGCGCAGTGGGCAGGACTTTACTATCACAAGTTTACACATAAAGATAGCAAGTTTCAATGTTCCTTCTGTGAGCGCTCCTATAGTTTGCCCAGTGATCTACAAAAGCATATGAAAACGCATACAGAAGATAGGGTGTGGGTGTGGTACTGTTGTCATTGCAGCAAATACTTTGACAATTCCAGTAAGCTTGTTAGTCACACAAGAGTTGAACATGCCAGTGAGAAGGAGATCTGCAGCGTCTGTGACGTTGCCTTTAGCGTTCATGTGAGGGACATAACCAAGCCGACTGAAACCAATATAAAAGTGGAAATCGTTGAAATTGGTGAAGATGACGATAACTATGACTGTTACAATGATACTGATGATAACATAGTAGAGTTTTCTACGAGTGACCTTCAATCcattgaagaaaaagatatgGATATATTCATATGCAACTTTTGCTGTGTTTACTTCACCAGTAAGAACTTGTTAAAGCTACATATAAAACGATCCCATATTCATATGTACGACTTTGTAGAACTCTACGAATGTGATATATGTTTAGGTCCTAAGAGCTATATCAGAGGTCAAGACATTAGAAAACACATGCGAGCGCGTCATAATGAGGAAGTATCCGACATTTCCCGGTTTAGACGTAAAACAAACGTCCAAGAAGTAAACTTGGAATTGAATAAAGCAAACACAAGTGTAATGAACAATGTGTATGAATGTAGACCTTGTGACAAAAGTTACGCCCGTAAGCAAGATATTTTCAAACATATGCGCAATGTTCATAACAAGCACATTGTTAATCCAAATCATTACAAAAAGAAACTTATCCTAGATTTTCCCGAGTATACGACCAAGACTAGAGAGATATTCAAGTGTGAAATTTGTGAGAAACACCACCTGACTGCTGAATCTTTAACTAATCATATGAGTACGACACACGAGAAGATAGTTAATAGTAATGACTTGGTAGTACAGATAGAGCAGATATTTGGTTGTACTTTGTGTGACACTGATTATTTCTCATCTTTAGAAGAACTCAAGATACATTGCCAGGATGAACACAATTTTTCATCTCACATTTATCTATGTCCACAATGTAATCATCATTTCTTCTATTCAAGTAATATGATGAAACATTTAAAAGAAATGCATGCTAACTTGAACTGGACGACTCGCGATTTACTAAAAACGATTGTAAGTAAAGGGAATGACAAGGTGTCAAGACTTCAGACAGGTGCTCTTGTGTATACCTGCAACTTTTGTCCCAAGAAGTTCAAGGTCCAAGCATACATAGAAAGTCATCTTGAAACAACacacaacaccaacaaaaaaGAGTACACTTTGAGTAAAGTGAAACTAGTAGATCGTGTCAGGAAGGAATCTAATATTGAGAGTCTTATATGTGACCAATGTAATCAAACTTTTTCAAATAGAAGTAGCTTGGCCCATCATATAGAAGAGCATATGGCGGTCAATTGGTCGTCCCTCGAGTGTCAACATTGTAAAGAATTGTTTGACAATATGAATGCTATGTGGTCTCATATGTTTACTATGCACGCTACATCTACACACCAGTGTTCTTTGTGTCTTGTGTCATTGGATCGTAAGCGAGATGTAGTGAAACATATGGCAGAACATCATGGTATTATACTACTCGTTGAGGATACGTTAGGAATAGGCGCACTTAAGGAGAAATGTCGTATCTATGTGAACGGTGCCCTCAGATATCAATGTCAGGAATGTACCGCTATCCTTCACTCGTTCAGCACTCTCAAGACTCACATGTATACACACACTGGCGAGAAACCTATTGTGTGTGATCAATGCAGTAAACAATTCCGCACCGTATCACAGCTCAAAGTTCATATAGTATCTGTACATGACAATGTTCGCAAGTACGGTTGTGAATACTGTGGTCATGCTTTTGCGTGTTCTTCTAACTTGGCACAGCATATCCGTATACATACAGGAGAAAAACCTTACGTGTGTGAATTGTGTGGTAATCGTTATGCACAAAGCGCGAGCTTATACAGTCACAAATTGACGCATGCGCAGGATCGTTGTCATGTTTGTACGGAATGTGGTCGTGCGTTTCATCGCATCACTCGGTTAAATCAACATTTGAAGTTACACACAGGAAATAGACCACCTCGCTCTCATCTGTGTGATATATGTCACAAGGGATTCCGTACGAATAGTGAAATGAAACGTCATCAACAGATTCACAATCCGGTGCGTTCCTACATATGTGAAACGTGTGGTTCAGCATTTACTATTCGCAAATATTTACTTCAACATTACAAGATTCATCGCGATTTACCACAAGATACTACTGGTCATGAACAACATGTGAACATTGAAACCATTACAGACATTGATTATGCTGCCTAA
- Protein Sequence
- MYKCPHCSKVVENIKPHMNIHTKKRTFVCEECGACFLHSTSLREHKASHSDTRTRLNTHYQSVHENIRKHQCMYCGHAFNEKSNLNVHLRIHTGEKKYVCEECGASFAQWAGLYYHKFTHKDSKFQCSFCERSYSLPSDLQKHMKTHTEDRVWVWYCCHCSKYFDNSSKLVSHTRVEHASEKEICSVCDVAFSVHVRDITKPTETNIKVEIVEIGEDDDNYDCYNDTDDNIVEFSTSDLQSIEEKDMDIFICNFCCVYFTSKNLLKLHIKRSHIHMYDFVELYECDICLGPKSYIRGQDIRKHMRARHNEEVSDISRFRRKTNVQEVNLELNKANTSVMNNVYECRPCDKSYARKQDIFKHMRNVHNKHIVNPNHYKKKLILDFPEYTTKTREIFKCEICEKHHLTAESLTNHMSTTHEKIVNSNDLVVQIEQIFGCTLCDTDYFSSLEELKIHCQDEHNFSSHIYLCPQCNHHFFYSSNMMKHLKEMHANLNWTTRDLLKTIVSKGNDKVSRLQTGALVYTCNFCPKKFKVQAYIESHLETTHNTNKKEYTLSKVKLVDRVRKESNIESLICDQCNQTFSNRSSLAHHIEEHMAVNWSSLECQHCKELFDNMNAMWSHMFTMHATSTHQCSLCLVSLDRKRDVVKHMAEHHGIILLVEDTLGIGALKEKCRIYVNGALRYQCQECTAILHSFSTLKTHMYTHTGEKPIVCDQCSKQFRTVSQLKVHIVSVHDNVRKYGCEYCGHAFACSSNLAQHIRIHTGEKPYVCELCGNRYAQSASLYSHKLTHAQDRCHVCTECGRAFHRITRLNQHLKLHTGNRPPRSHLCDICHKGFRTNSEMKRHQQIHNPVRSYICETCGSAFTIRKYLLQHYKIHRDLPQDTTGHEQHVNIETITDIDYAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -