Basic Information

Insect: Diaphorina citri
Gene Symbol: Znf672
Assembly: GCA_000475195.1
Location: CP125322.1:49490027-49494947[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0051 0.44 12.5 3.3 2 23 58 80 57 80 0.97

2 18 0.067 5.9 9.0 3.3 1 20 85 104 85 108 0.94

3 18 0.0055 0.48 12.4 1.7 1 23 116 138 116 138 0.98

4 18 0.00064 0.056 15.3 0.4 2 23 145 167 144 167 0.95

5 18 2.2e-05 0.002 19.9 3.5 1 23 173 196 173 196 0.98

6 18 1.5 1.3e+02 4.7 5.6 1 23 211 233 211 233 0.96

7 18 9.1e-07 8e-05 24.3 0.4 3 23 243 263 242 263 0.97

8 18 1.3e-05 0.0011 20.6 2.0 2 23 270 291 269 291 0.97

9 18 4.4e-05 0.0039 19.0 0.7 2 23 298 319 297 319 0.97

10 18 0.00021 0.018 16.8 3.8 1 23 811 834 811 834 0.95

11 18 0.0033 0.29 13.1 1.1 2 23 841 863 840 863 0.93

12 18 0.00018 0.016 17.0 0.2 1 23 869 891 869 891 0.99

13 18 1.6e-05 0.0014 20.4 1.9 1 23 897 919 897 919 0.96

14 18 8.3e-07 7.3e-05 24.4 1.3 1 23 925 947 925 947 0.98

15 18 5.9e-05 0.0052 18.6 0.5 2 23 973 995 972 995 0.94

16 18 0.0002 0.017 16.9 3.8 1 23 1008 1031 1008 1031 0.97

17 18 2.1 1.9e+02 4.2 1.5 1 23 1040 1063 1040 1063 0.88

18 18 0.077 6.8 8.8 1.1 2 23 1086 1108 1085 1108 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0051	0.44	12.5	3.3	2	23	58	80	57	80	0.97
2	18	0.067	5.9	9.0	3.3	1	20	85	104	85	108	0.94
3	18	0.0055	0.48	12.4	1.7	1	23	116	138	116	138	0.98
4	18	0.00064	0.056	15.3	0.4	2	23	145	167	144	167	0.95
5	18	2.2e-05	0.002	19.9	3.5	1	23	173	196	173	196	0.98
6	18	1.5	1.3e+02	4.7	5.6	1	23	211	233	211	233	0.96
7	18	9.1e-07	8e-05	24.3	0.4	3	23	243	263	242	263	0.97
8	18	1.3e-05	0.0011	20.6	2.0	2	23	270	291	269	291	0.97
9	18	4.4e-05	0.0039	19.0	0.7	2	23	298	319	297	319	0.97
10	18	0.00021	0.018	16.8	3.8	1	23	811	834	811	834	0.95
11	18	0.0033	0.29	13.1	1.1	2	23	841	863	840	863	0.93
12	18	0.00018	0.016	17.0	0.2	1	23	869	891	869	891	0.99
13	18	1.6e-05	0.0014	20.4	1.9	1	23	897	919	897	919	0.96
14	18	8.3e-07	7.3e-05	24.4	1.3	1	23	925	947	925	947	0.98
15	18	5.9e-05	0.0052	18.6	0.5	2	23	973	995	972	995	0.94
16	18	0.0002	0.017	16.9	3.8	1	23	1008	1031	1008	1031	0.97
17	18	2.1	1.9e+02	4.2	1.5	1	23	1040	1063	1040	1063	0.88
18	18	0.077	6.8	8.8	1.1	2	23	1086	1108	1085	1108	0.91

Sequence Information

Coding Sequence: ATGGGgcgcaaaaaagaaaaaaagcccaaGGATAGCTCGTCTACCACAACAATGACCTATGTCTCTGACAACGGTGATGTTAAAGTTGTTCCCATAGACATGTTAACAGAACATGTTAAAGAGGAACctgaggatgaggaagaggaatccaagtcaagtaaaaaacaaaaccaaTGTCATCTCTGTCAGAAGGTGCTGAAGAATAAACATGTTCTTAAAGCTCATATCACAACAGTGCATGGCGATAAATCATTTCAGTGTGATGAATGTGACATGTCATTTGGCACACATCAAGCACTCGGACGTCACAAGCAATGCAAACATATGGATATCAGTCTACGCCCATTCCCATGTGATTTGTGTGAACAGCGGTTCCTAAACAAGTCCCACTTGGCTTACCACGTGAAGACTCACACAGGTGAAAGGGATGttacatgtggtctgtgtttcCAGTCGTTCTATTCCAAGGCAGACTTGGTGCGCCATATGAAAGGGAGACATTTGAACATCCGCAGCTTCACATGTCATCTGTGTAACAAGGGATTCTTTCGGAAGAGCTATCTGAAAGTACATCTACTGACCATTCACATGCAACCAGCAGATGAGGCACAGAATGCAATTCATAGATGTTATGCTTGTCGGTACTGCAAGAAGATCTTCAACTCGCGTACCACATGTTACACTCACGAGCGTTCGCACTCCGGGGATGGTGAGCAGCGTTCCCTCTGTATGATATGCGGTAAAACCTTCTCCCGTCCATCCTCACTCAAGAAGCACCTTGAGATTCACAACGGCCCTCCCTCACTGAAATGCCCCTACTGTGATCGGCCCTTCTATCATTTGAGTTCGTACAAGCGGCATCTGAACATACACAACCGTCCCGACCCGGATGTTTGTCAGGTGTGCGGGACATTGTTTACCAATCGGGACGCATTCAGGCGGCATTTGCGGAAGCATGTGGCGCGTGGAGACCTGGCATCCCTGCCACCTCCTGACAGAGAGGAACCGAGGATAAGTAAAATGCAGGCTCTGATATCACGAGGTGTAGACCTGGATGAAATAATGAAGACTTGTAAGGTGGAAGTTGTGGAGCTGGGTGGTAAAAGCACACAAGGCAGATCCAGAGATAAGGCTGTGGATGCTTTGATCGccaaggaagagaagaacaacTGGATGTTGGAAGTGGATGAGTTGAACAATTCCATTCGGTGTGCCACTAGGCAAGATTTTGAACCAAAAACTGAAATCAACTGGGACGAACCCACTGCTCCTGTACCTGACATCTTCACTGTGGAATCTCTAGGCTATCTGAATGACAAATGCTACACGGTGATTAGTAATGACTTCAAGTCTATTGTtaagaataatattattgagGAGGATGTGCTTGGGATGTACGAGTGTTTTGACTTCAGCAAATTCACCAAACCATCTCTCATTTTCACATTGAAACTCTCTAGTGCTTGTGATAGCTTTGAGAATGACATGAGTCTGACAGCCACGGATATTATTCTACCCAGGGATGTCAATGTAGAGTTGTTCTCTACGGTTACCGAGATAGAGATCCCCAACTATGTAGAGGAAATACCTGAGATTAAGCCTTACCTGGTAGGGAGAGAGTTGTTCCCTTATGAGGAGATAGAGGAGATTGATATAGATGAGATAGACATGAGTGGAGATGTGTTCAGTATACATAGAGCATTGGAGAGAAACCTCCAGGAGACATTGAAACCAGTGGAGATTATACAGAGGTTCACCTCGGTGGAGATAGGGAGAGGGTTTGAAGATTTCCATGCCAATATTCACTCTACTATCACGCACCTCGGTATAACTCAGTATGAATATGACTTTAGGAACTTCAGAGATCCGAAGCGAAGTATTGTGGAGTGGACAGATGAGGAGTTACATCAGAAGATAGCACACGTGTTGAATGGAAAGACAAGAGTGTTCTGGATCAAGAATCTGTACAATATGAAAGATGATTGCAAGGAGATTGATGAACTAGTAAACGCACCATTCAAATATGAAGAGCgtgatgaagaagatgatgtaGGAAGTCCAGGCATGGATGATTATACTTACGAGGACATGGTAGAGCCTTCCGAACACCAGACAGATTCCGAGCCTGATGTGAAACCTAATGTAGAAGACTTATCAGAACCACCTCGCGtgagtgaagcagaagtaacgGACGATAATAAagagaataggaagaggaagaagaggaaacgaaAACGAAAGAGAATCAAAAGCGAAAGTGATACGGAGAGTGAGTAtgaaacaagaaggagaaaatcaaagaagaagaagaaaactcggaagaaaaagaagaagacgaggcacgtgaaaatagaaataaaggaagaggagggggagttGGTAATGGAGGAGAAACCTGTGATCCATGTGATCAAGACAGTGTGTACAGAGTTTATATGTTCCTATTGTGATAAGCGATGTTCTACCAAGGGGACCTTGAAGACACATATCTTCTCCATGCATATGATGGAGAAAGCATGCTCGTGTCATCTCTGTGGTATGTCCTTCATCGCCAAGTCCAGACTAGAAGCACACATAGAGAATGTACATCTGAGAATAAGGAACTATCAGTGTGCTTCGTGTGAGTGGGCGTTCTACTCCAGGGCAGATCTAGAGCGTCATGAGAGAAGACATACCGGTGTGAAACCATTCATGTGTCACTTGTGTTCCAAGACATTCGTTAGGAAAGCACAACTCAAGTCTCACATTGTTATACATTCCGGTGAGAGGAAGTTCATGTGTAACATGTGTGGTAAGAGTTTCGCCACACGATCCACCCTGGTCACACATCTGAAGCGACATGCCTTGAGACCCAACGTACGGTTCTACAAGACACCAGGGCAGGATGCACCTAAGCGTGCCAAGGGGGAACCGATCATGTGCACACAATGTGGTAAATCACTGAGTACCCCGCACTCACTCAAGCGACATGTAGAAATAGTACATGACAAGACGAAAGCCAAACCTCGTGTACAGAAAGCGTTCCAATGTCCACACTGTCCTCTCAGCTTTGGATATAAAACCTCCATGCAGCGCCACATGCACAAGGCACATAAGAGATTCAAAGAGCCTCGCAATCACTCCTGTCCTGTGTGTGGACGAAGGTTACTCAATGAGGCATGTGTACTGAGACATATGGTGAAGCGACATCCCTATAACTGTGACAATATAGACGCTATGAATGCAGCTGTGGCCAAGGCACACCAGAGAACTATACCTTGCTTCCTATGCAAGCGGAAGTTCCTCAAGCAGTCTGGCCTGCAGAAACATATGGTTCAGAAACATTACTACAAGAGTGAAGAGTTTGAGAGCATGCAGTATACGGCGCCTAGCCAAGAGCTTTATCCAGACATGGAAGAGAAACCAAACCTACTACTCTTGTAG
Protein Sequence: MGRKKEKKPKDSSSTTTMTYVSDNGDVKVVPIDMLTEHVKEEPEDEEEESKSSKKQNQCHLCQKVLKNKHVLKAHITTVHGDKSFQCDECDMSFGTHQALGRHKQCKHMDISLRPFPCDLCEQRFLNKSHLAYHVKTHTGERDVTCGLCFQSFYSKADLVRHMKGRHLNIRSFTCHLCNKGFFRKSYLKVHLLTIHMQPADEAQNAIHRCYACRYCKKIFNSRTTCYTHERSHSGDGEQRSLCMICGKTFSRPSSLKKHLEIHNGPPSLKCPYCDRPFYHLSSYKRHLNIHNRPDPDVCQVCGTLFTNRDAFRRHLRKHVARGDLASLPPPDREEPRISKMQALISRGVDLDEIMKTCKVEVVELGGKSTQGRSRDKAVDALIAKEEKNNWMLEVDELNNSIRCATRQDFEPKTEINWDEPTAPVPDIFTVESLGYLNDKCYTVISNDFKSIVKNNIIEEDVLGMYECFDFSKFTKPSLIFTLKLSSACDSFENDMSLTATDIILPRDVNVELFSTVTEIEIPNYVEEIPEIKPYLVGRELFPYEEIEEIDIDEIDMSGDVFSIHRALERNLQETLKPVEIIQRFTSVEIGRGFEDFHANIHSTITHLGITQYEYDFRNFRDPKRSIVEWTDEELHQKIAHVLNGKTRVFWIKNLYNMKDDCKEIDELVNAPFKYEERDEEDDVGSPGMDDYTYEDMVEPSEHQTDSEPDVKPNVEDLSEPPRVSEAEVTDDNKENRKRKKRKRKRKRIKSESDTESEYETRRRKSKKKKKTRKKKKKTRHVKIEIKEEEGELVMEEKPVIHVIKTVCTEFICSYCDKRCSTKGTLKTHIFSMHMMEKACSCHLCGMSFIAKSRLEAHIENVHLRIRNYQCASCEWAFYSRADLERHERRHTGVKPFMCHLCSKTFVRKAQLKSHIVIHSGERKFMCNMCGKSFATRSTLVTHLKRHALRPNVRFYKTPGQDAPKRAKGEPIMCTQCGKSLSTPHSLKRHVEIVHDKTKAKPRVQKAFQCPHCPLSFGYKTSMQRHMHKAHKRFKEPRNHSCPVCGRRLLNEACVLRHMVKRHPYNCDNIDAMNAAVAKAHQRTIPCFLCKRKFLKQSGLQKHMVQKHYYKSEEFESMQYTAPSQELYPDMEEKPNLLLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443101;
90% Identity: iTF_00443101;
80% Identity: -