Basic Information

Insect: Diaphorina citri
Gene Symbol: -
Assembly: GCA_000475195.1
Location: CP125322.1:7774498-7779249[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00022 0.019 16.8 1.1 1 23 51 73 51 73 0.98

2 18 5.9e-06 0.00052 21.7 1.1 1 23 79 101 79 101 0.96

3 18 5.8e-06 0.00051 21.7 3.8 1 23 108 130 108 130 0.98

4 18 0.00011 0.0096 17.7 0.2 1 23 137 159 137 159 0.98

5 18 1.8e-05 0.0016 20.2 0.6 1 23 226 248 226 248 0.98

6 18 0.022 2 10.5 3.5 1 23 258 280 258 280 0.91

7 18 0.00094 0.083 14.8 1.3 1 23 324 346 324 346 0.97

8 18 0.45 40 6.3 0.3 3 23 353 374 352 374 0.90

9 18 0.002 0.17 13.8 5.2 1 23 380 402 380 402 0.96

10 18 0.025 2.2 10.3 1.1 1 23 415 437 415 437 0.99

11 18 0.002 0.18 13.7 2.3 1 23 937 960 937 960 0.95

12 18 4.5e-05 0.004 18.9 0.1 2 23 967 989 966 989 0.95

13 18 5.1e-06 0.00045 21.9 0.6 1 23 994 1016 994 1016 0.99

14 18 0.00039 0.035 16.0 0.9 1 23 1022 1044 1022 1044 0.96

15 18 0.048 4.2 9.4 2.0 1 21 1053 1073 1053 1075 0.87

16 18 6.9e-05 0.006 18.4 3.6 1 23 1081 1103 1081 1103 0.97

17 18 8.2e-06 0.00072 21.3 0.2 1 23 1110 1132 1110 1132 0.98

18 18 0.02 1.7 10.6 1.0 1 21 1139 1159 1139 1160 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00022	0.019	16.8	1.1	1	23	51	73	51	73	0.98
2	18	5.9e-06	0.00052	21.7	1.1	1	23	79	101	79	101	0.96
3	18	5.8e-06	0.00051	21.7	3.8	1	23	108	130	108	130	0.98
4	18	0.00011	0.0096	17.7	0.2	1	23	137	159	137	159	0.98
5	18	1.8e-05	0.0016	20.2	0.6	1	23	226	248	226	248	0.98
6	18	0.022	2	10.5	3.5	1	23	258	280	258	280	0.91
7	18	0.00094	0.083	14.8	1.3	1	23	324	346	324	346	0.97
8	18	0.45	40	6.3	0.3	3	23	353	374	352	374	0.90
9	18	0.002	0.17	13.8	5.2	1	23	380	402	380	402	0.96
10	18	0.025	2.2	10.3	1.1	1	23	415	437	415	437	0.99
11	18	0.002	0.18	13.7	2.3	1	23	937	960	937	960	0.95
12	18	4.5e-05	0.004	18.9	0.1	2	23	967	989	966	989	0.95
13	18	5.1e-06	0.00045	21.9	0.6	1	23	994	1016	994	1016	0.99
14	18	0.00039	0.035	16.0	0.9	1	23	1022	1044	1022	1044	0.96
15	18	0.048	4.2	9.4	2.0	1	21	1053	1073	1053	1075	0.87
16	18	6.9e-05	0.006	18.4	3.6	1	23	1081	1103	1081	1103	0.97
17	18	8.2e-06	0.00072	21.3	0.2	1	23	1110	1132	1110	1132	0.98
18	18	0.02	1.7	10.6	1.0	1	21	1139	1159	1139	1160	0.95

Sequence Information

Coding Sequence: ATGCAAAAGAACTCTGGTGGCGAAGTCTTTGAAGTTGTCTACGTAAACTCATTGGAAGATGAAAATAGCGGAAGCAATGTGAACTCTCAGACATGTTTTGCGAGGAAGCATGAACGACATTCGTCGACAAAAGTCGACAAGGAGCGACCTTTCGAGTGTGAGATCTGTTTCAACAGATTCAGCCAGAAGCAAACGTTAAAGCAGCACATCCTAATACACACGGGGCAGAGACCATTTGAGTGCAACATCTGTAGTAAGACATTCACCCAGCAGGGCGCCCTTCACCGGCATTTAGCGCTTCATACGGAGGAAGACAAGCCGTTCACTTGTCACCTCTGTCCGCTTAGTTTTCGCCAACAGACGAACTTGAAGCGACATTTGAAACTGCATGAAGGAACCGCGAAAGTTTTCGAGTGTGAGATATGCGCTCGGCGCTTTGCGCGAAAGGAAGGTCTGGTCCGACATGGAAAAACGCATGAGCGCCAGCGGAAGACATTCGCCCAGCGGGGTTCGCTGCATCGTTTAGCGCTTCATACGGAGAGTGATAAGCCGTTCACTCTGCCTGAGCAAGAAAGCGGACAAGCAGCGGACATGGGTGACAACCTTCCGCTTAGTTTTGGGCAACATACGAACGTGAAGCGACATACGAATCCGCACGAAGGGAACGCCAAAGTTTTCGAGTGTGACATATGCACGCGTCGCTTTGTCCGTAAGGAAGGTCTGGTCCGACATGAGAAAACGCATGAGCGCCAGTTGGAGGGTAACGTGCAGCATTTCTGTTCACATTGCAACCAATCGTTTGCAAACGAACTGAGCCTGAAGAAACACGAGGATGGTCATTATAGTTCTCGAATTGAAGACATGAACGAAATGTCAAACCAGATCTCGTCCACGGGGAAAGTGttaaaagataaggaaaatacTGAAAGTAGAGCCGGGTCGTCTTCAAAGAAAATTCTCTTCCTAACATTCGCCTGTCCGATGTGTAACTTCACGTGTTCTAAGTCGGCAGACTTCGAGGTCCATCAGCTTACACATGTCCGGGAAGACAACATCTGCGTCTTCTGCAATTTAGAATTCTCCAGCCAAGACCTGGTCCTGGCCCACATTGACGATTGCCACATGCTGGGCCCGGCCCACTGCTGCAAACTGTGCCCAGAAACATTCAGCCAAGAGTCGCACCTCAGCGACCACTACCTCGTGCATCGTCGGGACGTGGATTTGAGTGACTATGTGCGCGTGTATCAGTGCTACCTCTGTGACCAACTGTTCGCACGACGCTCTCGAATTCTCAGTCACGTGAGGAAGCACGAAAAACGAGGTGATGTAAGAAGTCAAGGCGGATACTCTAAATCTAAACACAGAAGTCAAGGTAGCAAAAGAAACCTTCGCAGAGGAACGAAACCTGGTAGACAAGATGACAACCTAAACCAAAGTACAAAGCATGGAACTTCAGAGTATGGAAATGACCGAGGAAGTTTTATAGGTGAAGAACCAATAGATTCGTTCATAACCACTTTGCTCAAACAACAGGACATTGGTCAAAATAACGCTTACTTAGAAGCACAGGATATTCAAAATGACGCTTATGTAGAAACTGAGAACATTGCTCAAGATAACTATGGTGAGATGCATGACAAACTAGAGTACACGCCCAACGTAACGCCTGTAGATGAAATGAAATTCGATGGAGTATTAGTAAAAGCCGATACCGTAATTAGAAAGCCTTTTGATCTCAAATTCACCAGAAAATCCACAACTTTGTCAGCACAAACGGAAGAAAATCTTGTGCCTTCTGTTATCTCCAAAAGTATTAAAATTGAACAAGGTAGTGAAGATAAATTAGTCACGCTTCATACTAATGATGGAGACCAAGAACTATTAGACAAGAGTCTTTACAAATCCCATGAAAATGTGGTTCAGGATCCCATCGATATTCTGTACGAAAACGACCAACCTGTCAGTATATTCTACAAACAGGACGATTATACTGTACAACTTATCAATCCTGAAGGGAACTTGGACGCTCAGGAAAATCCTGACGATCCTGAGGACATTGAAATAAAGCAAGAAGAATTCCAGGATCAAGTAGAAGGATTTGAAAATGAAGTTAGCCAAGGAGATGAAAATTATGAAGTATACCAAGACAATGAAGAAATGACTACAAATGAAGTATATCAAGGTTATGGAGAAAACTTTAAAAAAGAATTGCTTCAAGATCATGTAGAAGAGCATCCAGAagaaatctatgaaaatgaagaGCACCAAAAAGAAAGCTATGAGAATGAAACATACCAAAAAGAAgtctatgaaaatgaaacatacCAAGAACATGAACAACAAATTTATCAAGATAAAGAAAACACTGAAGTAGAAGACGATGACACAATGTTCCTGGAAGAACGAACAACGAGTGCTCCGAACTCCCCAAGAGATTTGGATGACGACTACGACATTGACGAGTTAGTTGAAGCGAATCTCAACACGGATGTTGAACATAGTAGCAACGAAGAGATAAGCAAAGATATCGATGAGGCTCTATTAGGCAAAGGTCTCGATGAGGCTCACAAGGCAGATGATATTTCATGGGATTCTGCAGCAATCAAAGGGTCAGACAGTTCGTTGAACCCTCAAAGCAACACTGACGCGGTCTCTAATGCTATGATCACGGACGCTTTGCTGTCAAATTTTAAAGGCAAAGGAGTTATCAAAGCGAAACAAAAGGTCGAATACGTCAAAGTCAGTTTCGATGCAGACGGTCTCTTCTGCGAGGATGACGAAAGTTCCCAGGATAAAGGCGTGTCTCCCTACGCGTGTTACGTGTGCAAGAAGTCGTACGCCAACAAGAACAGCATGCGGAGACACTTCCGGCTCACGCATACGAATTATGAGAAGCTGCCGTGCGACCAGTGTCCGAAAATATTCCAATCCAAGGATGCGCTCCGCAAGCACATCCGTGCGTTACACACGCCGCACCGCTTCAAGTGTGGCGTGTGTCAGCGAACGTTCAACCGCAAGGATGCGTTGGCGAGCCACGCCCGCACTCACAGCGCCGAGAGACCGTTCGCGTGCGAAACGTGCGGTGCGAGTTTCGCGCAGAAACAACACTTGTACGCGCACTCCATGAAGCATCGGCAAGACATACAGAGCAGACCGTTCGTGTGTGACTACTGCGGGAAGCGGTTTCAGGGCAAGGAGATCCTGAAGAGGCACTGTCTCATTCATACCAACGAGCGTAACTTTGCGTGTCACATCTGCAATCGTACGTTCATTCAGAAAAACCACCTTGACAAGCATCTGCTCATTCATAATGAGGACGCAGCCAAGTACCCGTGCGCTATATGCGACAAGATATTCAGTAGGAAGGACACCATGCAGCGACATGCGGAAACGCATGCGAATGGGCGTCGACTGTACCATTGCGCTCATTGCGACAAGGGACTGAAGAGTAAGGTGACCCTGGCGTTGCACTTGAAGAGGAAGATTTGTATGAGCAGTCGAAAGtgggcgaagaaggagaaggaattgGGGAGGAATGTATTCTATGAAGgggCTCCTCAGTAA
Protein Sequence: MQKNSGGEVFEVVYVNSLEDENSGSNVNSQTCFARKHERHSSTKVDKERPFECEICFNRFSQKQTLKQHILIHTGQRPFECNICSKTFTQQGALHRHLALHTEEDKPFTCHLCPLSFRQQTNLKRHLKLHEGTAKVFECEICARRFARKEGLVRHGKTHERQRKTFAQRGSLHRLALHTESDKPFTLPEQESGQAADMGDNLPLSFGQHTNVKRHTNPHEGNAKVFECDICTRRFVRKEGLVRHEKTHERQLEGNVQHFCSHCNQSFANELSLKKHEDGHYSSRIEDMNEMSNQISSTGKVLKDKENTESRAGSSSKKILFLTFACPMCNFTCSKSADFEVHQLTHVREDNICVFCNLEFSSQDLVLAHIDDCHMLGPAHCCKLCPETFSQESHLSDHYLVHRRDVDLSDYVRVYQCYLCDQLFARRSRILSHVRKHEKRGDVRSQGGYSKSKHRSQGSKRNLRRGTKPGRQDDNLNQSTKHGTSEYGNDRGSFIGEEPIDSFITTLLKQQDIGQNNAYLEAQDIQNDAYVETENIAQDNYGEMHDKLEYTPNVTPVDEMKFDGVLVKADTVIRKPFDLKFTRKSTTLSAQTEENLVPSVISKSIKIEQGSEDKLVTLHTNDGDQELLDKSLYKSHENVVQDPIDILYENDQPVSIFYKQDDYTVQLINPEGNLDAQENPDDPEDIEIKQEEFQDQVEGFENEVSQGDENYEVYQDNEEMTTNEVYQGYGENFKKELLQDHVEEHPEEIYENEEHQKESYENETYQKEVYENETYQEHEQQIYQDKENTEVEDDDTMFLEERTTSAPNSPRDLDDDYDIDELVEANLNTDVEHSSNEEISKDIDEALLGKGLDEAHKADDISWDSAAIKGSDSSLNPQSNTDAVSNAMITDALLSNFKGKGVIKAKQKVEYVKVSFDADGLFCEDDESSQDKGVSPYACYVCKKSYANKNSMRRHFRLTHTNYEKLPCDQCPKIFQSKDALRKHIRALHTPHRFKCGVCQRTFNRKDALASHARTHSAERPFACETCGASFAQKQHLYAHSMKHRQDIQSRPFVCDYCGKRFQGKEILKRHCLIHTNERNFACHICNRTFIQKNHLDKHLLIHNEDAAKYPCAICDKIFSRKDTMQRHAETHANGRRLYHCAHCDKGLKSKVTLALHLKRKICMSSRKWAKKEKELGRNVFYEGAPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443095;
90% Identity: iTF_00443095;
80% Identity: -