Basic Information

Insect: Diaphorina citri
Gene Symbol: -
Assembly: GCA_000475195.1
Location: CP125328.1:10117101-10133308[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 2.2 2e+02 4.2 1.3 1 16 53 68 53 77 0.86

2 31 0.02 1.7 10.6 0.1 1 21 167 187 167 191 0.92

3 31 6.4 5.7e+02 2.7 3.8 1 23 312 335 312 335 0.97

4 31 0.21 18 7.4 5.9 1 23 340 362 340 362 0.98

5 31 0.49 43 6.2 1.5 1 23 394 417 394 417 0.90

6 31 0.094 8.3 8.5 1.5 2 23 421 442 420 442 0.96

7 31 0.0048 0.42 12.5 4.0 1 23 489 512 489 512 0.96

8 31 0.0032 0.28 13.1 0.2 1 23 514 536 514 536 0.98

9 31 0.0084 0.74 11.8 0.2 2 23 552 574 552 574 0.94

10 31 0.00015 0.013 17.3 0.8 1 23 580 603 580 603 0.97

11 31 3.6 3.1e+02 3.5 3.8 1 23 609 632 609 632 0.91

12 31 1.7 1.5e+02 4.6 3.4 1 20 648 667 648 670 0.95

13 31 0.00011 0.0099 17.7 2.7 1 23 676 699 676 699 0.97

14 31 0.012 1 11.3 0.4 2 23 735 756 734 756 0.93

15 31 0.0074 0.65 12.0 3.4 2 23 763 784 762 784 0.96

16 31 0.00052 0.046 15.6 2.0 1 23 790 812 790 812 0.98

17 31 0.0016 0.14 14.1 0.8 1 23 819 841 819 841 0.97

18 31 3.8e-06 0.00033 22.3 0.5 1 23 860 882 860 882 0.99

19 31 0.081 7.1 8.7 4.6 1 23 888 910 888 910 0.97

20 31 0.017 1.5 10.8 0.4 1 23 916 938 916 938 0.98

21 31 1.1e-05 0.00093 20.9 0.7 1 23 944 966 944 966 0.98

22 31 9e-06 0.0008 21.1 1.1 1 23 972 994 972 994 0.98

23 31 0.00022 0.02 16.7 0.5 1 23 1000 1023 1000 1023 0.95

24 31 0.0018 0.16 13.9 2.0 1 23 1029 1051 1029 1051 0.98

25 31 2.7e-05 0.0024 19.6 1.9 1 23 1057 1079 1057 1079 0.97

26 31 6.7e-05 0.0059 18.4 0.5 1 23 1085 1107 1085 1107 0.97

27 31 0.001 0.088 14.7 0.6 1 23 1113 1136 1113 1136 0.93

28 31 2.8e-06 0.00025 22.7 0.9 1 23 1143 1165 1143 1165 0.98

29 31 0.014 1.3 11.1 3.9 1 23 1171 1193 1171 1193 0.96

30 31 3.8e-05 0.0033 19.2 2.9 1 23 1199 1221 1199 1221 0.98

31 31 0.12 11 8.1 0.5 1 23 1227 1250 1227 1250 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	2.2	2e+02	4.2	1.3	1	16	53	68	53	77	0.86
2	31	0.02	1.7	10.6	0.1	1	21	167	187	167	191	0.92
3	31	6.4	5.7e+02	2.7	3.8	1	23	312	335	312	335	0.97
4	31	0.21	18	7.4	5.9	1	23	340	362	340	362	0.98
5	31	0.49	43	6.2	1.5	1	23	394	417	394	417	0.90
6	31	0.094	8.3	8.5	1.5	2	23	421	442	420	442	0.96
7	31	0.0048	0.42	12.5	4.0	1	23	489	512	489	512	0.96
8	31	0.0032	0.28	13.1	0.2	1	23	514	536	514	536	0.98
9	31	0.0084	0.74	11.8	0.2	2	23	552	574	552	574	0.94
10	31	0.00015	0.013	17.3	0.8	1	23	580	603	580	603	0.97
11	31	3.6	3.1e+02	3.5	3.8	1	23	609	632	609	632	0.91
12	31	1.7	1.5e+02	4.6	3.4	1	20	648	667	648	670	0.95
13	31	0.00011	0.0099	17.7	2.7	1	23	676	699	676	699	0.97
14	31	0.012	1	11.3	0.4	2	23	735	756	734	756	0.93
15	31	0.0074	0.65	12.0	3.4	2	23	763	784	762	784	0.96
16	31	0.00052	0.046	15.6	2.0	1	23	790	812	790	812	0.98
17	31	0.0016	0.14	14.1	0.8	1	23	819	841	819	841	0.97
18	31	3.8e-06	0.00033	22.3	0.5	1	23	860	882	860	882	0.99
19	31	0.081	7.1	8.7	4.6	1	23	888	910	888	910	0.97
20	31	0.017	1.5	10.8	0.4	1	23	916	938	916	938	0.98
21	31	1.1e-05	0.00093	20.9	0.7	1	23	944	966	944	966	0.98
22	31	9e-06	0.0008	21.1	1.1	1	23	972	994	972	994	0.98
23	31	0.00022	0.02	16.7	0.5	1	23	1000	1023	1000	1023	0.95
24	31	0.0018	0.16	13.9	2.0	1	23	1029	1051	1029	1051	0.98
25	31	2.7e-05	0.0024	19.6	1.9	1	23	1057	1079	1057	1079	0.97
26	31	6.7e-05	0.0059	18.4	0.5	1	23	1085	1107	1085	1107	0.97
27	31	0.001	0.088	14.7	0.6	1	23	1113	1136	1113	1136	0.93
28	31	2.8e-06	0.00025	22.7	0.9	1	23	1143	1165	1143	1165	0.98
29	31	0.014	1.3	11.1	3.9	1	23	1171	1193	1171	1193	0.96
30	31	3.8e-05	0.0033	19.2	2.9	1	23	1199	1221	1199	1221	0.98
31	31	0.12	11	8.1	0.5	1	23	1227	1250	1227	1250	0.91

Sequence Information

Coding Sequence: ATGCATGCTTCCATACCTATTCAATTACAGATGACATCTCAAGGGGGGATGGATGGACTGTGTCACAGAAAGAATAATTTCGatgTGGACATGTTACAATATCTGTATGGAGCATCCTTTGACAGATTTCCCCACTTGAGCAATGGTGAAATGTATTACACTTGTGAAGCATGCGACGAGTTCTACACAACATCACACACgttactctatgaacatatcAAATACTTCCATGGAGATTTTCCTAGCAACCAAAATAATGTACTTAATTTTAGTTATCCCAACTCTAGTCATATCAGTGATATGAATTCAATTTCTCATGAAGCTCTTGATGTAAAAGGGCAGATTTGTTTGAAGTCTCTCCAAACTGAAACCAATCCCGCGAGTGCCATCAATGTTGACAGATTAGAAATCAACGTAAAACAAGAGTGGTTTGATTTCCATGATcattttgaaatggaaaaagaactCGGCAATGGTGTCATTATTCACAGAGATGTTTTTGAATGTGAAGTGTGTGATGAAGTATTTGTGGGTAAGCAGAAATACATAAACCATCTCTCAGGGAAGCTGCATGTGTTCAATGAAATTTCTAAAAACAGTGTTCCGTCCGTGAATAATTCTAATTGTAActcagatgatgatgatgatggcgaTGTTAAATTTGATGTTTGTAATGGAATTATCAATAAAATAGAGAACACTTGTTCAGAACATAATGATCGAATTTTCTATGCAAATATTAAAAGAGAACATCTAGATCCCGATGATTGTCCAAAGTACAAAATGACAAGAGAATCTGGTATCAAGCTCAACATTAAATATGATATGAATGAAGCTGAAGATTTGAAATGTAAGCTTTGTAACTACCAAGCTGTGAATATCAAAGGAATAAGAGCGCATGTCTTTAGGAAGCATTTGCAAAACACAGTGACCTACTCTTGTAAGAAATGCCCTTTTGAGACTCAATTTAAAGTGACATTGGGTGATCATTACAAAACTTGTCATAAAGGAATCTCATTCACGTGTGATGAGTGTCATTTGTGTTTTAATACCTTTCGCCGGTTCGATTCACATATAAGAGCTCATGAGTATACAGAACAGTGTGAACTTTGCAATGAAAAGGTCATAGGTAAGAATCAAATCTACTTCCACTACTATCACGAGCATGAAGGCTATGACTTCAACTGTAAGCAATGTTCATTTACGACCAAAACACCGAAAAAATTCATTGAACACAAAGAAGCTGGTCATTTCACATGGAATTGTGAGCACTGTGACTTTAGTGCATCGAAAAAATCTGTACTTTTGAGTCATTTGAAACAGCATGTGACACGCGTGACGCGAACACAACATATGACACCAGACgaagaaacaaatgaaatcCCAATAGAACCCGACTTGTCACCTGATTTACAAAAAGAGGAATTGGTTCGTGAAACTAGATCGATGAAAATGTACGACAATTACAAATGCAATATCTGCGATTGTTTTTTCAAGACCCATTCGATTTTGGAAGATCATATGAAGGCGTTACATAGTTTTCCATGTGATAAATGTGATTATGTTGGTGGAAATTTGAGCATGTTGACAAGCCATCAAAATTCGCATAACTCACAGACGAAAGTACCTCCTAtattatcaaaaaataaaagacaatgtGAGTATTGTAGTCAACTTTTTAGACGGGCAAGTGCTGTGGAGAAACACATTGCTCTTAAGCATACAGGAGACAAACCATATAGTTGCTATTTGTGTGAAGAAAAGTTCGAAAACTCAGAATCTTTGAGAACCCACATGAACTCACTCCACGCGCTTCTCTTCCCTTACAGTTGTAATATTTGTTTTCGGAGAAATTCTAAATATACACATCTGAGTAGACATAAACTCTTAGTTCACCAAAAACAAATAGATGGAGTTGGTTCTGTCGAGATCGGTGAGAAATACTCTTGTACTCAGTGTTCATATCAGACGTACCACAAACATGCCTTGGATAATCACATGCCTCTGCATTCTCTGGATAGAAAACACCAATGCCCTGTATGCCTTAGAAGATTTTCGAGACAAAGTGACAATAACACCCATCAGAGAAGAGTACATGGGGTCTTGAAACCAACTCCATTAGAGATGCAAGTTGAAAAAAGAGACCAAGTGGCTTTGAGAATGAAACCAAGTGCATTTGAGATGCAAAGTGAATCTCAGCTAACTTGTGACATCTGTGATCGAGTATTTCAGACTGACAAGCAATGGAAATTACACATGGGATTTCATAACACTAAGAGACGTTTGCCATGTAAACTTTGCGGATTCAGATTAAAGAATCATAAACAGTTGAAATTACACCAGCGTTATCATTTATCCAGTAACCTTTTTCGTTGTGAAAAGTGTAACTTGGGATACTCGAGGAAAGACAGTTTTGAATACCATATGACCAGTCATAATCAAAAGGAGCAAACTTTCATGTGTACGCAATGTGATTTCACAAGTAGCTCAAAAGACACACTGAATACGCATGCTATGGTTCATGCTGATGAACTCAAGTATAGTTGTCAGAATTGCGATTTTAAATACGAAAGGCCATATAAATGTGAACTTTGCGACAGTGCTTTCAAAACGTCTGGTAATTTGAAAACGCACATGTTAGTGCATAGTGATGATCGACCTTATCAGTGTCAGTTATGCGAGTACTCATGTAAGTCAGCTAGTTACTTAAAGTGTCATATGGTAGTGCATACTGAGGAAAGACCTTACAAATGTGAATTTTGCGAGTACTCGGCAAAAACTATGTCTAAGCTTGGAAGCCATATGATTGTGCATACGGATGAAAGACCGTTTGAATGTGAATATTGTGATTATAAAACCAAAACCAGTGGTAATCTCAAGACGCATATGGCAGTTCATACTGATGAAAGACCTTACGAATGTGAAACTtgtgatttcaaattcaaaactgCATCTTCGTTGAGAACGCATCAGTTGGTTCATACTGAAGAACGTCCGTTTACATGTGATCTTTGTAACCTAAGTTTCAAGACAAACATATATCTGCAGAAACATGCTTCAGTAGTTCATTCTGACGAGCGACCTTACAAATGTGAATGCTGTGAAAGCACGTTCAAAAGTGCTGGGAATTTAAAAACTCATATGTTGGTTCATACAGAGGAAAGACCATACGAATGTGAATATTGCGACTACACATGTAAAACGAgtggaaatttgaaaactcACTTGGTAGTACATTCGGATGAACGACCATATGATTGTGATTCTTGTGATCTGAGCTTCAAAACAGCTTCTACTCTACGGTCTCATTTAGTAACTCATTCCGATGAACGTCCATTCAAGTGTGAAGTTTGTGAAGTGAGCTTCAAGATGAATGCCTATTTGCAGAAACATACAACCCTGGTGCACACTCAACAAGGAAGGCCATATACGTGTGACAAATGTGACAGTAGTTTCAAAACTTCAGAGAACTTGAAATCTCACATGGCGATACATTCAGAAACGAAGATGTTCAAGTGTAATGAATGCAACATGAAATGTCGAACGAAGATGGCTTTGAAAATTCACTCGACATCCCATCAGTTGGATTTGCCATTTGAATGTGAGCTTTGTGAATACAGATGTGCTCGTAAGTCAAATCTTCGAAGTCACATGTCGACCCATTCTGAAAATTGTTCTTATGTGTGTGAACATTGTGAGTTCTGTGCTAATACGGAAGATGATTTGGAAGAGCATGTAGTCAATGCACACTTCCGTCCTACTCATCCTGTAGCAGAACGGAAAAAATCAACAGCGCCACCAAAAAGTAGTGTTTTGCAACAGCAAATCAGCAcAATATGA
Protein Sequence: MHASIPIQLQMTSQGGMDGLCHRKNNFDVDMLQYLYGASFDRFPHLSNGEMYYTCEACDEFYTTSHTLLYEHIKYFHGDFPSNQNNVLNFSYPNSSHISDMNSISHEALDVKGQICLKSLQTETNPASAINVDRLEINVKQEWFDFHDHFEMEKELGNGVIIHRDVFECEVCDEVFVGKQKYINHLSGKLHVFNEISKNSVPSVNNSNCNSDDDDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKMTRESGIKLNIKYDMNEAEDLKCKLCNYQAVNIKGIRAHVFRKHLQNTVTYSCKKCPFETQFKVTLGDHYKTCHKGISFTCDECHLCFNTFRRFDSHIRAHEYTEQCELCNEKVIGKNQIYFHYYHEHEGYDFNCKQCSFTTKTPKKFIEHKEAGHFTWNCEHCDFSASKKSVLLSHLKQHVTRVTRTQHMTPDEETNEIPIEPDLSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVGGNLSMLTSHQNSHNSQTKVPPILSKNKRQCEYCSQLFRRASAVEKHIALKHTGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHKLLVHQKQIDGVGSVEIGEKYSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKPTPLEMQVEKRDQVALRMKPSAFEMQSESQLTCDICDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVHADELKYSCQNCDFKYERPYKCELCDSAFKTSGNLKTHMLVHSDDRPYQCQLCEYSCKSASYLKCHMVVHTEERPYKCEFCEYSAKTMSKLGSHMIVHTDERPFECEYCDYKTKTSGNLKTHMAVHTDERPYECETCDFKFKTASSLRTHQLVHTEERPFTCDLCNLSFKTNIYLQKHASVVHSDERPYKCECCESTFKSAGNLKTHMLVHTEERPYECEYCDYTCKTSGNLKTHLVVHSDERPYDCDSCDLSFKTASTLRSHLVTHSDERPFKCEVCEVSFKMNAYLQKHTTLVHTQQGRPYTCDKCDSSFKTSENLKSHMAIHSETKMFKCNECNMKCRTKMALKIHSTSHQLDLPFECELCEYRCARKSNLRSHMSTHSENCSYVCEHCEFCANTEDDLEEHVVNAHFRPTHPVAERKKSTAPPKSSVLQQQISTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -