Basic Information

Insect: Diaphorina citri
Gene Symbol: -
Assembly: GCA_000475195.1
Location: CP125323.1:13362236-13366531[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 7.2e-06 0.00063 21.4 2.2 1 23 324 346 324 346 0.99

2 24 2.3e-06 0.0002 23.0 3.0 1 23 362 384 362 384 0.98

3 24 0.0065 0.57 12.1 2.9 1 23 390 412 390 412 0.98

4 24 2.1e-05 0.0019 19.9 1.9 1 23 418 440 418 440 0.95

5 24 4.4e-07 3.9e-05 25.2 0.8 1 23 446 468 446 468 0.99

6 24 1.7e-05 0.0015 20.2 3.7 1 23 474 496 474 496 0.98

7 24 6.5e-06 0.00057 21.6 3.3 1 23 502 524 502 524 0.95

8 24 5.3e-07 4.7e-05 25.0 3.9 1 23 530 552 530 552 0.96

9 24 6.8e-05 0.006 18.4 1.6 1 23 558 580 558 580 0.98

10 24 4.7e-05 0.0042 18.9 1.6 1 23 586 609 586 609 0.94

11 24 0.0064 0.57 12.1 0.3 1 23 614 638 614 638 0.98

12 24 0.00011 0.0099 17.7 0.4 1 23 643 666 643 666 0.98

13 24 6.4e-06 0.00056 21.6 3.5 1 23 671 693 671 693 0.99

14 24 0.011 0.97 11.4 0.5 2 23 697 719 696 719 0.93

15 24 0.12 11 8.1 4.3 1 23 807 830 807 830 0.90

16 24 0.00026 0.023 16.5 0.9 1 23 877 899 877 899 0.97

17 24 7e-08 6.2e-06 27.8 1.0 1 23 1103 1125 1103 1125 0.98

18 24 4.6e-05 0.0041 18.9 6.5 1 23 1131 1153 1131 1153 0.99

19 24 3e-05 0.0026 19.5 0.4 1 23 1166 1188 1166 1188 0.97

20 24 0.0012 0.11 14.4 1.8 2 23 1198 1219 1197 1219 0.97

21 24 1.8e-06 0.00016 23.3 2.6 1 23 1225 1247 1225 1247 0.98

22 24 3.9e-05 0.0034 19.1 4.4 1 23 1253 1275 1253 1275 0.98

23 24 1.4e-06 0.00012 23.7 1.7 1 23 1281 1303 1281 1303 0.96

24 24 6.1e-05 0.0054 18.5 1.4 1 22 1309 1330 1309 1330 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	7.2e-06	0.00063	21.4	2.2	1	23	324	346	324	346	0.99
2	24	2.3e-06	0.0002	23.0	3.0	1	23	362	384	362	384	0.98
3	24	0.0065	0.57	12.1	2.9	1	23	390	412	390	412	0.98
4	24	2.1e-05	0.0019	19.9	1.9	1	23	418	440	418	440	0.95
5	24	4.4e-07	3.9e-05	25.2	0.8	1	23	446	468	446	468	0.99
6	24	1.7e-05	0.0015	20.2	3.7	1	23	474	496	474	496	0.98
7	24	6.5e-06	0.00057	21.6	3.3	1	23	502	524	502	524	0.95
8	24	5.3e-07	4.7e-05	25.0	3.9	1	23	530	552	530	552	0.96
9	24	6.8e-05	0.006	18.4	1.6	1	23	558	580	558	580	0.98
10	24	4.7e-05	0.0042	18.9	1.6	1	23	586	609	586	609	0.94
11	24	0.0064	0.57	12.1	0.3	1	23	614	638	614	638	0.98
12	24	0.00011	0.0099	17.7	0.4	1	23	643	666	643	666	0.98
13	24	6.4e-06	0.00056	21.6	3.5	1	23	671	693	671	693	0.99
14	24	0.011	0.97	11.4	0.5	2	23	697	719	696	719	0.93
15	24	0.12	11	8.1	4.3	1	23	807	830	807	830	0.90
16	24	0.00026	0.023	16.5	0.9	1	23	877	899	877	899	0.97
17	24	7e-08	6.2e-06	27.8	1.0	1	23	1103	1125	1103	1125	0.98
18	24	4.6e-05	0.0041	18.9	6.5	1	23	1131	1153	1131	1153	0.99
19	24	3e-05	0.0026	19.5	0.4	1	23	1166	1188	1166	1188	0.97
20	24	0.0012	0.11	14.4	1.8	2	23	1198	1219	1197	1219	0.97
21	24	1.8e-06	0.00016	23.3	2.6	1	23	1225	1247	1225	1247	0.98
22	24	3.9e-05	0.0034	19.1	4.4	1	23	1253	1275	1253	1275	0.98
23	24	1.4e-06	0.00012	23.7	1.7	1	23	1281	1303	1281	1303	0.96
24	24	6.1e-05	0.0054	18.5	1.4	1	22	1309	1330	1309	1330	0.93

Sequence Information

Coding Sequence: ATGTCTCAATTAAACCCACACCTTCTtcaacaacaaagaaaaatccTCATTGACAATTTACTTCAAATGAGAACACAACAAGAGCATCCACAAGTTCCAAGTCAACACAATATGAACGGTAGACATTCTAGTCATAGCTTACACCCTGCCAGTGGGGTGAGCACAGTTCACAATGGTGCAAGTAACATGCACAGTGCTCCACATCATATGAACAATGCAAACCACTACATGATGGATCCAAGACATTACTCGAGTAACAATACAATGCCAGCGTATACCTCGGGAAATGTACAACCTGTTAATCTGATGGGAAGCATAGCGACAATGTCAAATCGGCAAATGTCCCAACCGATGTCTTCAAATGTAATAGATTTACAGCAGGTTCCACCAAAACCGCCCACAACAATGCCATCTCAGCAAGTGCATGAGCAACAGAGAAACAATTTACCTCACCCAATGCAGCAAATGCATTCAATAGAGAATATGAACAATGAAAGACATGAAAATCAGATGCAACAGACCCAACATCAAATACAACATCAACTGCAACACGGTCAAATGAGTCAACAGGTTCCTAATACAAATGTCAATCAACATGGACACACAAAGGATTATAGTCCTCTACCAACCAGTCCTGCGGTTGATCAGCAAGATTGTCAGTTATCACAACCGCAAATGCAAAAAGACGATCTACTCAGGAGTAGACAAAAGAAGGAACTGCCCGAATCGTTACAAGAATTGAAAAACGTTAAAAACGGAGAGCAAGTTCTAAAACCGTCGGAGAGTGACGAGATGAGTGCAATGGATGTCATGTCCATGATGGGTAAATACGTAGACGCCAACGAGGAGGAAAGCAAAGACATCGAGAAGCTAGTGATAGAGGAAAGTGCTTCGGAAGACTCTGACGACGAGGAGGATGAAGATTTTGAAAACGATGAAAACAGTTCGGgaaagaaaatggtgaaaaagtTCAAGTGTAATATTTGTCCGAAAAGGTACGCGCGCAAAAACAGGCTGACGAATCACTTGAGAACACATGAGGCTGGGAGCGGGGACGAGAAGAGCGAAGGTGGTGAGGGGAGCTTCACTTGTAGTCAATGTCCGAAGACGTTTGTGGACAAGTGGCATTTGAACAGACACTTAAAGAGCCACAGTGAGAATAAGGTGTTCCGATGTGAGCAGTGCCGGTTTGATTTCTACGTGAAGCGCGAGTATAATAGACATATGAAGATTCATGACGGAGTCAAAGTGTTTCTCTGCTCCGTGTGCTCCAAAACATTCACGGATAAGGTCAAGTTCAACCGGCACATGCGCGCGCACGAGGGTATCAAACCATTCCAGTGTAGTGTGTGTAGTGAGAGTTTTACTCAGCGGAGTAACTTGAACATTCACCTCCGTATACACGACGGTATTCGGCCGTTCCAGTGCAATGTGTGCTACATCTGTTTCACGAACAAGTCCGATCTTAACCGACACTCGCGAATTCATAACGGCATCAAACCCTTCCTCTGCTCGATGTGTGCCAAATGTTTCTCGAGGAAAGATGATCTCAATAGACACATGAAGATTCATGAGGGGTCGAAGCGGTACCTTTGCACGATGTGTCCCAAGTGTTTCACAAGGAAGGATGATTTGAATCGGCACATGCGCAATCACGACGGACTCAAACCCTTCCATTGCTCGGTCTGTTTCGAAAGTTTCACCCAGAAAGCCCTGCTCAATATTCATCTCCGAATACACACCAATAGCAAACCGCACGCGTGCTCCATCTGTACGGAGTCTTTCAGTCAGAAGTCCAACTTGTACATTCATCTGAAACTCCAGCACGGGGTGAACCCGTTCAAATGTGACGTCTGTCCGAACGAAACCTTCGAGAAGGAAACGCAGCTGAGTCTGCACATGCGCACAGTACACGGCGTCAAACCGTTCAAGTGCAGCATGTGCGACGAAGGTTTCCCGAAGAAATCCGTGCTCAAGGAACACCTGCGTGTGTCGCATAACGTGAACCCCTTCAAGTGTGACATTTGCTTCAAATTGTTCACGAAGAAGTCCAATCTGCGCACGCATATCAAAACGCACGAGCCGATCCCCTGCGACAAGTGTCCGGAGATATTTGAGAAGAAGACGGACCTTCAGGAGCATGTTGACAAGTGTCATAACCTACAtgaggaagacgaggaggaggaggggctGGATGAGTTTGATGCGCCCAAGGAAAAGAGTTTCAACTGCTCCAAGTGTTTGAACATCGTACGGATACCGGTCGAGATCAAAGTAGAAGTCCCCTTCGTGTGTAAGGCTTGCGCGAGtgaggagacgaagaaagacAAACCGGGAGCCGCCTCCTTGGGTAATAAGAGAGGTAAGGCCGCTGCCTCTCAGAAGAAAGAGACCGGGAAAGGAAAGGCCAAGACTGTTTATACCTGTGAGATGTGTGAGAAGACGTTCAAATACAAACTGCCGCTTGTGAAACATTGCAAGAAACAACATCAGGTGGATTTAGAAATGTCGGAGAGTGAAGATGAGAACAAAGCCTCTGTAAACACTGCCAAAGTGAAAAAGGAATCTGTCGAAGGGGTAAGCATGGAAGGGAAAAGCTTGTCGGAGTTCAGCGGACCGGTTGGGAATTTCAAGTGCGCGCTGTGTGAAAAGACCTTCGTACGAAAGCAAACACTGGACCGTCACGTGACCGTGCACGGCATCACTGGCGCGGAGCACGATGAGATCATGGGAGAAAGCAATTTGGCAACAGCGCAAGTGAACGCTAGCGAGACGAGTGGAGATTTGAACACAAGTCTGGCACCAAGTGACGGGACGATCCCGGAAATCGACATTAACAAGTCAGACACTGACAATATGTACATCGTAACTCCCAAACAAGAGCCGGACAGTATCGTGAAGGAAGAAATGCTGAGTGACTATGATGATAACGATAACTACATGATGACGGCCACTCAGGATGACGATGATGAGCCGTTCCAATCGGAAGTGGAAAATGACGACGACGATGTCCCTCTGTCGAAACGAACGTCGTACTACGCGTCGTCAGCAGATGAAGAACGGCCTGCTCCCAAGAAACGCGGAAGAAAGAAGGGCGTCCCGACCCGACGCAAGTCAACAGGTTCGAGAAAATCCGCTAAGAGCGATGTAGACACGACGGATTACGAGTCCGCGATGGATACAGATTATGTGGATGACAATGAGGCGAGCGAGAGTCGAAACGAGGATTCCGGAGTAGAGGGAAAGGAGAATGAAGACGGGAGGAGGAAACGGGGCAAACGGAAGAAGGGTGATACACCGCAGGAGTTCCCTTGTTCTGAGTGTGGTAAAGTATTCACGCGGAAGACAACGCTCAAGCGACATGTCCGCATCCATACGGGTATCAAAGAGTTCCAGTGCTGGATCTGCTCCAAGTGTTTCATGGAGAAGTCACACCTCAACCGACATCTGAGGAAGCACTCCGGTGTCGTGGACAACATGGAAGCGGAGGCACCCTACGCCTGCTCCATCTGTGATAGGAAGTTCACGATCAAAGGTCAGCTAAGTCGACACCTGCGGGCGCACGAGAACGAAAAACCCGAGAAGCCCCAGACATGCGAGGTGTGTCAGAAAACTTTCGACAAGATGGCCAAGTTCAAGCGCCACCTGAAGGTGCATGACGGTGTGCGCGACCACCAGTGTCAGGTGTGCGGGAACCGGTTCAAGCAGAAGAGCAACCTCAACATCCACATGAAGATCCATGAGGGGATCAAGGCACACCAGTGTAACGTGTGCATGATGAAGTTCACGAACAAATCCGATCTTAACCGACACATGCGGAAGCACGATGGGGTCAAACCGTTCCTGTGTTCCATATGCGCCAAGAATTTTTCGCGCAAAGACGATCTCAATCGGCACATGCGCAAACATGACGGTATCAAGCCGTTCTTGTGCTCAATGTGCGCGGAAGCCTTCTCGAGGAAAGACCACCTAAAGAAGCACATGCGGAAGTGTTACGGCCCGCCTACTGGGGAATATCGACCGCGGAGGCGCGCGAAGAAACTTCCCGCGACCGATGTGCCCCCCACGGTGGTCGGGAGTCAACTGAACACGATGATCTCGCAGGACCTCACTGTGCGTGAACCGCCCCAGTACCGGAGTGTGCAGAACAGTATCGTGTCTGAGCATGCGCACCAGGTACTCCAGGCGTCGGTGGGACAGGCGGCGGCCAGTGGGTTGTTCTGGTGCGCGGCTGCGCAGTACTATACGACCCCGCCCACGATAGAGTTTGCGCCTAAGCCGGAGTATTACGCGTAG
Protein Sequence: MSQLNPHLLQQQRKILIDNLLQMRTQQEHPQVPSQHNMNGRHSSHSLHPASGVSTVHNGASNMHSAPHHMNNANHYMMDPRHYSSNNTMPAYTSGNVQPVNLMGSIATMSNRQMSQPMSSNVIDLQQVPPKPPTTMPSQQVHEQQRNNLPHPMQQMHSIENMNNERHENQMQQTQHQIQHQLQHGQMSQQVPNTNVNQHGHTKDYSPLPTSPAVDQQDCQLSQPQMQKDDLLRSRQKKELPESLQELKNVKNGEQVLKPSESDEMSAMDVMSMMGKYVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDVCPNETFEKETQLSLHMRTVHGVKPFKCSMCDEGFPKKSVLKEHLRVSHNVNPFKCDICFKLFTKKSNLRTHIKTHEPIPCDKCPEIFEKKTDLQEHVDKCHNLHEEDEEEEGLDEFDAPKEKSFNCSKCLNIVRIPVEIKVEVPFVCKACASEETKKDKPGAASLGNKRGKAAASQKKETGKGKAKTVYTCEMCEKTFKYKLPLVKHCKKQHQVDLEMSESEDENKASVNTAKVKKESVEGVSMEGKSLSEFSGPVGNFKCALCEKTFVRKQTLDRHVTVHGITGAEHDEIMGESNLATAQVNASETSGDLNTSLAPSDGTIPEIDINKSDTDNMYIVTPKQEPDSIVKEEMLSDYDDNDNYMMTATQDDDDEPFQSEVENDDDDVPLSKRTSYYASSADEERPAPKKRGRKKGVPTRRKSTGSRKSAKSDVDTTDYESAMDTDYVDDNEASESRNEDSGVEGKENEDGRRKRGKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGEYRPRRRAKKLPATDVPPTVVGSQLNTMISQDLTVREPPQYRSVQNSIVSEHAHQVLQASVGQAAASGLFWCAAAQYYTTPPTIEFAPKPEYYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -