Dcit008962.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- -
- Assembly
- GCA_000475195.1
- Location
- CP125323.1:16967957-16968289[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-07 0.00022 22.3 0.0 13 39 26 56 18 61 0.78 2 2 5.3 5.3e+03 -1.4 0.0 22 36 82 96 82 105 0.72
Sequence Information
- Coding Sequence
- ATGCCGAGAATATACAAGCGAAGACCAGGAAGTCGGAAGTATGCAGACTACACAAGTACCAAGCTGGAAGAAGTATtgagaaaactgaaaagtaaAGAAATCACCCAACGTCAAGCTGAAAAGCAATATGAAATCCCAAGAAGCACATTGAAGAGAAAGCTGAAAGGTGAGAGTTTGAAGAAGCCGGGTGGACAACCTGTGATTGATCTTAACActgaagaaaagttcaaagattacATAGTAGCGTGTTCTATGTTTGGATTCCCGTTGGCCACCTTTGATGTGAGAATTCTTGTGAAAACACATTTGGATAGAAATGGAACTCAAATCTGA
- Protein Sequence
- MPRIYKRRPGSRKYADYTSTKLEEVLRKLKSKEITQRQAEKQYEIPRSTLKRKLKGESLKKPGGQPVIDLNTEEKFKDYIVACSMFGFPLATFDVRILVKTHLDRNGTQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -