Dcit001762.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diaphorina citri
Gene Symbol
-
Assembly
GCA_000475195.1
Location
CP125321.1:22085716-22096218[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-10 2.9e-07 31.5 0.0 3 37 694 728 692 736 0.88

Sequence Information

Coding Sequence
ATGCATATATTTGATGATCAAATGTTTCCTGTCACAGGTCACCTCTCCCTCATGGTAAACAGACGCAGGGATAGCAACACATCGGATGATACAGTGGAAAATCTCATTGAGGCAATAGATTCCAATGAGCCTATCATTGACAAGGATCAGGAAGACCTAAGACAGAAGATAATCAAACAAGCACAGCAAACTAAAGAGGAAGAACTCAAGAAAGCAAAGACAGTGAAGGCAGGAAAGAAGACAGCATCTGCTAAGGAGGAACCGGATGATGTTTGTATCTTAGAAGAAGCGGCAATCAAACAAGAAAAGCCAGCCAAAATATCGATCAAGCCTGTGGAGACCTTGAAAGAAACCAAGAAACCAACTGGAAGTGTAAACACCACCCCTGTCAAGTCCTATGGAAGTGCTAAGAAGAAAACAGGTACCACTCAAGTATGCGCCCAGTGTAGGAAGCGTCAATACTGTAAATTCAAGCTTGTGGACACCAAATCCTCCAAAACCCCGATGTCATTCCTTCACTTCTGCTCGGAAACATGTGTGTTCAAATTTCAAGGCATAAAGAAAAACACACCGGCAGCATCAGCAGCGGCAGCAGCAGTGGGAGCCAAGAAAGCCGCTGTTCCTAAACTTGTCCCGATGCTACCCAAACAAGAACTGCCCCTGTGCGTCACAGCTGCTCAGGCCACCGGTAAAGTGTCAGGGCTGGAACGTAATTGTACCTGGTGTTCGACAGGGCTGGATATCAACAACCCGGAAGTCCTCGCCTGGGAAACGTTTGAGTTCTGTTCGGTCAATTGTTTGAagTCATTCCAGCGTAAGATCGGCTCCTCTTGTTCCCAATGCAGCAAACCGGTCCCTCTCGAGTCCCTCGGGAAATATTGTGTCCGGTTCGGATGCAATGTGAACCAGTTCTGTGTGAAAAAATGTCTGGATGAGTTCAAGCTGAAACATAGGCCGTGCTTTCTGTGCCAGACCAATATGAGTGGAGCAAAGAATATGTATCGGGTAGACAAGAAATTGCTGACGAGAGCCAAGACAGTGGATATGGGTCGGTGTGATAACTATTTGGACTTCTGCGACGCGTCCTGCTTTCGCGTCTACACGGAGAAGTTCAAGGTGAAGCGTCAGGTGGTTGAGCCGTGCGCGGTGTGTCGCCTGCCGCGTCCAGTGACCTGCCAGGTGCAGGATACGCGGTGCGACCCCAATAAAACACCCGCTACGAAACCGCTCTGCAGTGGTCAATGTCTGAAGGCGTACACCTTTGTGAACAAAATCAATCCagTTTGCTGTCATTCGTGTTCTACGTATTTCGATGATAGTTCCACGCCTGGTACAAATGGAAGGAAACATTTCTACAAGATCTTCTTCCAGGGAGAGTTCAAAGTATTTTGTGATAAGCTGTGTCACACCCTGTTTGTTCAGGCTCAGCGAATCATCGTGGAATGTGCATGGTGTAGGGTGAAGAAATACAATTTCGACATGATAGTGGAGAATGTTAACAGCTCTACCGCTGGTCAAACTTACCTTTGCTCTATGAACTGTCTGACTTACTTCTCTGCCTCGGCCAGTAGTCAGTCCTTGATGtataaaaaAGTCCAGTGCGACAACTGTGCGGAAGCCAAGGTGCCACGCTTCCATGTCATGGCAGATTCTTCCCTGAAGAACTTCTGCTCTTACATGTGTACCCTCAACTACCAGAAGAAGACAAGTACCGCCCCGGGCATCGAGAAGATATTGACCGCCAAACAAGTAGCGATGAAGCTGCAGGGCGCCCGACCAGCCGCCGGCCGAAAGAGTGCTGCCGCCCCGGCGCCGACTAATGCAGCTGCCGGAGCTAAGGGGGCCTCAGTAAAGGAGGTGGGACAGTTGATCATATCTGACGTGCGCTCCCTGGCGGCAAGTTCCGGAACTTCAGTACAAAGTGATGAGGAAATGTTGATGCAtcgaataaaacaaataaaagaccTGAACACGTCTATCAAACCTGCTCAACCCAAAGGCCCCACGCTGATGTCACCATCCACAGGAAAACACAATTGCAAGTCATCAAAAAGAAAGAGACGTCAATCATGGAACTCAGAGGACATGGAAAAAGCAGTTCGAGATGTCAGGAACAAGCGTCTTGGGTTTTTGAAGGCAGCCAAAGTGTACAATGTACCAAAAACCACATTGTTTCGTCTGGCCAAAATGGGTGAAGGCTCTTCGAAACCTACAAAAGCAAGGATGGGTCGAAAGACATTACTACCGCCTGCATTGGAAGCGCAGCTGgttgaatacctacttgaaatggagaagaagttCTTTGGTCTCACTAGAAGAGACGTGAAAGTTATGGCTTACCAGCTTGCTAGAGCGAATGGGTTGAATTGGCAGGGAAACTCAGGAATAGCAGGACCAAAATGGCTAGAACTTTTTCTTATACGACACAAAGACAAGCTTTCAGTGCGGAAACCGACTGCAACGTCGCACAACCGAGCCAAGGGGTTCACTAAGGAGAAGGTGCaacatttcttcaaaattctCCAGGATGAGATGGATAAGAAAAACTTCCCTCCAGCCCGTATCTTCAACGTAGACGAAACTGGTTTGACTGTCGTGCAGTCAAAGGTTCCATCTGTTCTTGCTCTCAAAGGAAAGCGTCAAGTAGCTGCAATCAGTTCTGCAGAGCGTGGATCACTGGTAACAGCTGTCACTTGTATGGGGGCATCTGGAATTTTCGTTCCTCCCATGCTCATTTTCCCCAGAAAAAACTGGACTGCACGCCTAATGACTGGAGCTCCAGCTGGTTGTATCGGTGCTTGCCATCCATCAGGTTGGATACAATCGTACTTATTCACTGACTGGTTTAAACATTTCATCAAACATACACGACCAAGCGAAGAATCACCGGTACTCCTGATTTTAGATGGGCACTACTCACACTCTCGGAACCTAGATGTCCTCAATCTAGCTAGAGAAAATCATGTGTCAATTGTTTGCATTCCACCACACACATCTCACAAACTTCAGCCGCTCGATAAGACGTTCATGGGAGCTTTGAAGGACTACTATAGTGAGGAGATACGTTTGTGGTTGAGAACTGTTCGAAGTGAAGAAGCATCTTTTCGCCTCCTGAACTCCTATGACATTGCCCAATTGTTTGGAAAGGCTTACATTAAGGTACAAACAGCATCAATCGCAATTAGTGGATTTAGAGCTACAGGAATATATCCTTTCAACCCAGCGATTTTCAATGATTCTGAATACCTTCATGAAGAGCTTCTAGACGAAGATTGCAATGAAGCAGCCGATGCCATAACTCGATCAGGTGACAACAGAGATTTGCAGGAAACGGAAGGCGACAGTCTTGATTTTGATCATCCAATTCAAATTGACACACAGGCAGAAGTCTATACTCACCAGCGTTCTACAAGTTATGCAAATGGGACAACTACAGAATGGGACAAGCCTTCTACAAGTCATGCAAGCGGGACAAAAGCGTGGGAAAATATATCTACAAGAGATGTAAAagacagaaagggagaaaagtggGTGATGTGTATGATGTGTGAAATCTGGGTCCATAACGCCTGTGCGGGCTATGAAAAAGGTTATTACATTTGCGATTATTGTCATTAA
Protein Sequence
MHIFDDQMFPVTGHLSLMVNRRRDSNTSDDTVENLIEAIDSNEPIIDKDQEDLRQKIIKQAQQTKEEELKKAKTVKAGKKTASAKEEPDDVCILEEAAIKQEKPAKISIKPVETLKETKKPTGSVNTTPVKSYGSAKKKTGTTQVCAQCRKRQYCKFKLVDTKSSKTPMSFLHFCSETCVFKFQGIKKNTPAASAAAAAVGAKKAAVPKLVPMLPKQELPLCVTAAQATGKVSGLERNCTWCSTGLDINNPEVLAWETFEFCSVNCLKSFQRKIGSSCSQCSKPVPLESLGKYCVRFGCNVNQFCVKKCLDEFKLKHRPCFLCQTNMSGAKNMYRVDKKLLTRAKTVDMGRCDNYLDFCDASCFRVYTEKFKVKRQVVEPCAVCRLPRPVTCQVQDTRCDPNKTPATKPLCSGQCLKAYTFVNKINPVCCHSCSTYFDDSSTPGTNGRKHFYKIFFQGEFKVFCDKLCHTLFVQAQRIIVECAWCRVKKYNFDMIVENVNSSTAGQTYLCSMNCLTYFSASASSQSLMYKKVQCDNCAEAKVPRFHVMADSSLKNFCSYMCTLNYQKKTSTAPGIEKILTAKQVAMKLQGARPAAGRKSAAAPAPTNAAAGAKGASVKEVGQLIISDVRSLAASSGTSVQSDEEMLMHRIKQIKDLNTSIKPAQPKGPTLMSPSTGKHNCKSSKRKRRQSWNSEDMEKAVRDVRNKRLGFLKAAKVYNVPKTTLFRLAKMGEGSSKPTKARMGRKTLLPPALEAQLVEYLLEMEKKFFGLTRRDVKVMAYQLARANGLNWQGNSGIAGPKWLELFLIRHKDKLSVRKPTATSHNRAKGFTKEKVQHFFKILQDEMDKKNFPPARIFNVDETGLTVVQSKVPSVLALKGKRQVAAISSAERGSLVTAVTCMGASGIFVPPMLIFPRKNWTARLMTGAPAGCIGACHPSGWIQSYLFTDWFKHFIKHTRPSEESPVLLILDGHYSHSRNLDVLNLARENHVSIVCIPPHTSHKLQPLDKTFMGALKDYYSEEIRLWLRTVRSEEASFRLLNSYDIAQLFGKAYIKVQTASIAISGFRATGIYPFNPAIFNDSEYLHEELLDEDCNEAADAITRSGDNRDLQETEGDSLDFDHPIQIDTQAEVYTHQRSTSYANGTTTEWDKPSTSHASGTKAWENISTRDVKDRKGEKWVMCMMCEIWVHNACAGYEKGYYICDYCH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00442560;
90% Identity
-
80% Identity
-