Dcit015418.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- ttk
- Assembly
- GCA_000475195.1
- Location
- CP125325.1:33502672-33507362[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-17 2.8e-14 54.0 0.0 1 45 291 336 291 336 0.95
Sequence Information
- Coding Sequence
- ATGGCCACTCCAACACAACAATTCTGTCTACGATGGAACAATCATCAGCCAAACTTCATTGCAGTGTTTTCTTCTCTGCTGAGGAGTGAGACAATGTGTGATGTAACTTTAGCAACAGAAGGAAAACATATCCTGGCTCACAAAATTGTGCTCTCAGCGTGTAGTTCATATTTTCAGATGTTATTCTCAATCAACCCTTGCAAACACCCCATTGTGATATTGAAGGATGTTCAGTTCAAAGATCTGAAAACTCTCATAGACTTCATTTATTTCGGTGAGGTCAATGTATCTCAAGAACATCTGCCTTCTCTACTTAAGACGGCAGAAACACTTCAAATCAAAGGTCTCACTGAGATGCCCGAGAAACAGATCACTCTCAATTCGATCCCCAGTAACGCCTCTACCCCGGGGCCTGGGGTAGCAGGTGGGGGAGGAGGAGTTGACAAGGTCGAAAGTCCCCTCGGATCCCCGAGCTCGTACAAGCGAAAACGAATGCGAAAAACGTCGGCAGAATCTATCGCTACGATAGAGGAACAGGAGTCGACGATAAATCAGAGGGATATACAGCAACATGTGCACAGTATGGTCAATGTGAAACCTGAGCCACACACACATGAACTGCAGAGGCAACCTACCCCTCAGATGGAAGACAAGTCACCTCGGAGTGCATCCATGTCTTCAGCCGAGGCAGGGCCTAGTTCAGGCAACAAATCTGGTTGGGTGGAGCCCCCCACGTCATCAACATCTACTCCAACATTGACCCCCCGCCCCCAATTACCAGGAGGGGGAGACCAGTATAACACAGAGTTTCCTACCGAGACACCCCCGATCAcgcagaggaagaagaggtaCAACAGTTGTTCGTCACAAGATAGGGAGAGATTCAATGAGGCGCTGGAGGCTGTGAGATATGGAGGCATCGGGTTTTGTAAAGCAGCCAGACTGTATGGTGTCAACAATAGATCTCTGTGGCTCGAATACAAGAAGAGAGGCTACCCCACCCTGCGCCCTGGACCAAAGCTCAAGTCCAAGGATCCTGCTGTCCAAGCTGCGGCAGCAGCAGCAGCCGCCGCCGCTGCAGCAGCTGCTGCTTCGTCAGCACAACAACAGTTACCCCAGACTCCCAACACCACTTCCCAACGCTCCCAGACCGTGCAGACTACCCCAGCACCTCGGGAACTCCATGTCCACAGAGATGTACAACAAAGACTGATGGCCGTGTCCACACAAGGTGCCGTCACCTCGGTGCAGCAGGTCACATCTGTGGCAGACTATAATAATCAGCAACTCGCCACAGCACAACCCACCACCACGTTCTTTCAGTCCTCACATCTGACGCCATTCGCCCATTACTATCATAATCCTCCCTTGTGA
- Protein Sequence
- MATPTQQFCLRWNNHQPNFIAVFSSLLRSETMCDVTLATEGKHILAHKIVLSACSSYFQMLFSINPCKHPIVILKDVQFKDLKTLIDFIYFGEVNVSQEHLPSLLKTAETLQIKGLTEMPEKQITLNSIPSNASTPGPGVAGGGGGVDKVESPLGSPSSYKRKRMRKTSAESIATIEEQESTINQRDIQQHVHSMVNVKPEPHTHELQRQPTPQMEDKSPRSASMSSAEAGPSSGNKSGWVEPPTSSTSTPTLTPRPQLPGGGDQYNTEFPTETPPITQRKKRYNSCSSQDRERFNEALEAVRYGGIGFCKAARLYGVNNRSLWLEYKKRGYPTLRPGPKLKSKDPAVQAAAAAAAAAAAAAAASSAQQQLPQTPNTTSQRSQTVQTTPAPRELHVHRDVQQRLMAVSTQGAVTSVQQVTSVADYNNQQLATAQPTTTFFQSSHLTPFAHYYHNPPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00442944;
- 90% Identity
- iTF_00442931;
- 80% Identity
- iTF_00442932;