Basic Information

Insect: Diaphorina citri
Gene Symbol: bab2
Assembly: GCA_000475195.1
Location: CP125325.1:40969202-40979116[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.00081 0.82 10.8 0.0 5 38 464 498 460 502 0.79

2 4 4.7e-08 4.8e-05 24.4 0.0 4 39 513 547 512 552 0.85

3 4 0.017 17 6.6 0.0 23 38 586 602 566 606 0.79

4 4 5.3e-08 5.4e-05 24.2 0.0 2 35 626 659 625 662 0.92

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.00081	0.82	10.8	5	38	464	498	460	502	0.79
2	4	4.7e-08	4.8e-05	24.4	4	39	513	547	512	552	0.85
3	4	0.017	17	6.6	23	38	586	602	566	606	0.79
4	4	5.3e-08	5.4e-05	24.2	2	35	626	659	625	662	0.92

Sequence Information

Coding Sequence: ATGGCTGCTATCACCACAGGAACCAACTTTTGCATGAAATGGCAGAACTTTCAAGTCCATTTGGCTTTCGAGCTGTACCAGCTGCTCAAAATGGAGAGCATGGTGGACGTAACATTGAAAGCCGAGGGAGAGGCATTTCAAGCTCACCGAATCATACTGTCAGCATCAAGCCCCTTTTTTCAGGAAATCCTTTCCCCAATTGAAAATGATTGTCACCCTATAGTCATTTTGGCTGATGTACCAGCTAATGATGTGAAGGCAATTCTAGAATTCATTTACTATGGAGAAATCAAAGTTGAGGGAGCCAACATCTTCTCGGTACTGAAGACTGCACAGAACTTGAAAATTTCAGCTTTATTAGAGatTGAAAATCATCTCATGCAAAATCCCATTTGTACATCAACCATCAACAATGAAATAGAAGTATCCATAACAACTCCACCAAACAAATATTCCACTCCACCCAAATCAAAAAGCACACCCAAGAAACCCGATCGAACAAAAGTGCTTGGACAGCCAACGTTACCACAACAAGACAATACAAAGAAAACCCCCAGCCAACCTAGTTTACCTGTGCTTTCTACTAATCTTAACTCTTTGAATGTAGCCTCATCTAAAACAAGTTTACCCTCAAGTTCACCTAGTAAATCAAATTCAATACTGCCAAGTAGAGTAACTCCCAGTAAAACATCTCAACCTGCATCACAATCACTTTTTCCCATTGTTACTGAAACTAAATCTCCACCCAAGGTTCCTACAAAAAGACCGCTTCCTCCCTTAGAACCAGCAACATCTTCTAAAACAAGTAGTCTGATATCTTCCAATTCTTTCACTAGTATAGAATCACCTCTCTCCAGTAGTTCATTCTCTAAGAGTATATTCTACTCAGATCCAAGTTATGACACTGTGATATCAAAACCTCTTGCCGAATTACAACCGGACACCAATGACATTCATGATAAGTTTAGTCACAAGGATGGGTCAGATTTTATTGCATTGGAAGGACTCTCAGCAGGCTTGATAAGTGAAGATGAGGTTTCCAAGGAAAACCACTCAAATGTGGGTGAAGTCGTCAATCCAGTCTTGTTCAGTCAGAGTAAAAACACTGAAGTCCATGTTGTTCAATTTGATGGTCTGGAAGCTgtcaatgaagaagaaaatccactTGCACCCtggttgactttgaaacctcccATTGAACCCAAGGACTCCAGTAAGGAAAGCCAGCTCACAACCACCAACACTTCAGAAACTAATGAccagcaatttttcattgtaggACTGGATGGCAGCCATTGCTCAGTTGATGAATTCTTCATGTCAGTAGATGATGGTGGTAGTGTACCAGTACATCAACCAGAAGAAAAGACAATAGCAAAGGCTGATTTGATCAATCAGGCAATCGAGGACATTGCCACCAATAAGAAGACAATCTCCGATATAGTCAACACATATAATATTCCTCGCTCCACGATATACTACAGAGCTAAGTCCTCGGGTATCAAAATAGGAgagaaatacaataaattagTCAAGGATTTGGATGACGCAGTGAAATACGTCAAAGGTGGTGCCACACTCAAGGAAGCATGTGACAAGTACGGTGTTGCCAAAACTGTCCTCTGGCGTAGAGTTAACAAAGAGCTTGGACATCGAGCATTGACTGCCCGAGCTCAATGTAAATCCAAATATTCCCAGACCTCACTAGAGAGTGCACTGCTGGATCTGAAAAATGGAATAAACCTCGCCAACGTGTGCAAGAAGTACAACATTCCCCCCGCCACTTTACATCGTGCCCGGAATCGTCTCATAGACCTCGGTCATCTAAGTAAGGAGAAAGTGTTCATGCCACGATATAATAAGGACATGACTAAGCGTGCGCGACTATTAGCCGCGGTGCGCGCCGTGCAGGACAAGGAGATGACGACTACACAGGCCTCGCTCTTCTACAAGGTACCCAAAGTCACCCTGTGGAGGAAGCTGTCCTATTTGAACAAGATGATAAACTTGAAcatcaaaattgaagaaatggaGATGGATTCGTTcgaaatggaggaagaggaagaggaggatgaagatgagGTGTTCATGCTCCCTCCGAATTACCAACAGGAAGCTATGCAAGACGAAGAGATGATGATTCTAATGATGGAAGAAGAATCGCAAGAAGGCACCAAATACATGCTGAGTGAAGAAGAGAATTCATCCCAGACCCCCCTGATCAATACTGAAAACTCCCTACTCATCTCTGATTCTGAGGAAGTAGGTGATGCACACAACTTTCTCATCAAAACAGAACCAGAGGATGAAATGACCACAACTTCGTACATATTGGTCAACAATGATATGTGCTTGAAGATATAA
Protein Sequence: MAAITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQEILSPIENDCHPIVILADVPANDVKAILEFIYYGEIKVEGANIFSVLKTAQNLKISALLEIENHLMQNPICTSTINNEIEVSITTPPNKYSTPPKSKSTPKKPDRTKVLGQPTLPQQDNTKKTPSQPSLPVLSTNLNSLNVASSKTSLPSSSPSKSNSILPSRVTPSKTSQPASQSLFPIVTETKSPPKVPTKRPLPPLEPATSSKTSSLISSNSFTSIESPLSSSSFSKSIFYSDPSYDTVISKPLAELQPDTNDIHDKFSHKDGSDFIALEGLSAGLISEDEVSKENHSNVGEVVNPVLFSQSKNTEVHVVQFDGLEAVNEEENPLAPWLTLKPPIEPKDSSKESQLTTTNTSETNDQQFFIVGLDGSHCSVDEFFMSVDDGGSVPVHQPEEKTIAKADLINQAIEDIATNKKTISDIVNTYNIPRSTIYYRAKSSGIKIGEKYNKLVKDLDDAVKYVKGGATLKEACDKYGVAKTVLWRRVNKELGHRALTARAQCKSKYSQTSLESALLDLKNGINLANVCKKYNIPPATLHRARNRLIDLGHLSKEKVFMPRYNKDMTKRARLLAAVRAVQDKEMTTTQASLFYKVPKVTLWRKLSYLNKMINLNIKIEEMEMDSFEMEEEEEEDEDEVFMLPPNYQQEAMQDEEMMILMMEEESQEGTKYMLSEEENSSQTPLINTENSLLISDSEEVGDAHNFLIKTEPEDEMTTTSYILVNNDMCLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00442983;
90% Identity: iTF_00442983;
80% Identity: iTF_00442983;