Dcit022663.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- bab2
- Assembly
- GCA_000475195.1
- Location
- CP125328.1:15075474-15085255[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6e-15 6.1e-12 46.5 0.0 1 41 412 453 412 456 0.92 2 3 9.4e-11 9.5e-08 33.0 0.1 2 38 467 503 466 508 0.89 3 3 3.1e-10 3.1e-07 31.4 0.0 2 30 556 584 555 585 0.95
Sequence Information
- Coding Sequence
- ATGGCGGGTGCCAACCAGCACTATTGCCTGCGCTGGAACAACTACCAGTCCAATATGACCTCGGTGTTTCATCATCTGCTCAGGACCGAGGCCTTTGTCGATGTGACTCTCGCCTGCAATGAACAGTCACTCAAAGCTCACAAGGTGGTACTGTCGGCGTGCTCGTCCTACTTCCAGAAGCTTCTCATTGAGAACCCCTGCAAGCACCCCACCATCATCATGCCACAGGACGTCTGCTTCACGGATCTCAAGTTCATCATAGAGTTTGTGTATAGGGGAGAAATAGATGTATCCCAGTCTGAGCTACAGTCCCTGCTCAAAACAGCCGACCAGCTCAAGATCAAAGGCCTGTGCGAGGTTCCAGAAGAGAGTCGTAATTCGGGTGATCCCATGGCATCGGCCACGGCTGAAGTCCAACCTCTCGAGCCTCTTCATCATCCTTGCACCTCCACCACAGCCTCACCTCCATCTCAACATCACACCTCACATCATCAACAGGAGGGTGAAATgcaacagcagcagcagaatCATCAGCCGGCCCCGGAGAATGGAAAGCGAGCTTCCACAACACAAAGACAACATCACGCCAAGAGGAAGTACACACGACACGAGAACTCGCACAATACTCCCGCTCAGTCCTCGCCCACTGCACATCAGATTACCTTAAAGaaCGGCCAGCATTGTATGACCATCACGGACGCGGGTGATCATCAGAGTCTCAAATCCTCCAACATAGTCATTCTAACCGAGCCCCCGCCCACCCACCATACCACCCTAATGATACCTACCTCTGCCCATTCCTCACTCACTACGCTACAAACACAGGTTGTGATTGACGGTTCAGAAGTGGACATGGGAGAGGCTACTCCAGCAGGGCCTACCGCTACGCCAGTACCTGTGTGTACTCTGGAGATGTCCCAGCAAACACAGACCTCTCAGCATGCGTCCCCTAGACACCGCGATATCGCAGTGGGCACGTCCGGTATACCAAGGGGCAGACGGGGTGGAGGAGAGGACGAGGAGGATTGCAAGGTCAAATTCGAGACTCTCCACTCCATGGAGCACCAATCAGATCATCTGGACATGTCCAGTACCGATGAAGAACATACCATGCACACTATGATGATCACACCTGAACTACTCGGTCTGctgccttcctcttcctcgaaCCATTCCGATGGAGGTGTCTCAGAGACGGACAAGGCGGGCTCACTCACCGTAACCAAGACCTGGACTCACGAGGACATGGATGCTGCGCTCGAAGCTCTTCGCGCCGGCCAAATGAGTCTGACCAAGGCCTCTGTATCGTACGGCATACCGTCTACCACGCTATGGCAACGGGCCCATCGTCTGGGCATACATACACCGAAGAAGGAAGGCCCGACCAAGTCTTGGAACGAGGAGATATTGAATGTTGCTCTGGACGCGTTGCGAGCCGGGAGTATATCAGCAAATAAGGCGAGCAAAGCTTATGgCATTCCAAGCAGCACTCTCTACAAGATCGCTCGCAAGGAAGGGATCCGACTGGCTCAGCCGTTCAACGCCTCGCCCACCGCGTGGAAACCTGAAGACCTCGAGATAGCACTGGAGGAATCCGCTCCGGGCAGACAACCGTGCAGCGCGCCAGTGCTGAATATGGAATACCTAGTGGCACCTTGTATGGGCGATGATGCTATGGTGGATGCTTTGGAGGCAGTCAGGATGGGTCAAATGTCCATCAACCAGGCAGCGATTCATTTCAATCTCCCTACTCATCCCTATACGGCAGATTCAAGCGAGTCAAATACGAGGCGGATCACCCTGAGGGAGGAGACGGGTCTATTATGGAGGGACATGAGGGACATCACTCCTCACCTCCCTCTAATCAGTCGCAGAGCTCACAGCAGAGTCACCATACTACCTCACAGCAAAACACCCCTCAACCTCAGCAACAACAGCAGGCGCAGCCTCAACCCCCGCCTCCGCCACCTCAACAACAAACCGTCAACATCCAAGCCCAGCACATCACCACCTCACAAACCTCGCACCTCGGCCCTCCCGCCCAGATTATGCTCGTACAGTATCCGTCTGCCCAGCTCCAGATGTACTCCCACTCCAGTTGAGAACACGGGGTCACCTATCTGCCTTTGTAAGCGACAGGCTAAACACGCTCTCTCCGTGCCAAACGCTGAACTTTTGAAACCTTTCCAAGTTTTCCCTTCGGAAAAACAGGTAATTTTCCTTGGGAAATTTAGGGCTGGGGCCACACTCAAAGGTTAA
- Protein Sequence
- MAGANQHYCLRWNNYQSNMTSVFHHLLRTEAFVDVTLACNEQSLKAHKVVLSACSSYFQKLLIENPCKHPTIIMPQDVCFTDLKFIIEFVYRGEIDVSQSELQSLLKTADQLKIKGLCEVPEESRNSGDPMASATAEVQPLEPLHHPCTSTTASPPSQHHTSHHQQEGEMQQQQQNHQPAPENGKRASTTQRQHHAKRKYTRHENSHNTPAQSSPTAHQITLKNGQHCMTITDAGDHQSLKSSNIVILTEPPPTHHTTLMIPTSAHSSLTTLQTQVVIDGSEVDMGEATPAGPTATPVPVCTLEMSQQTQTSQHASPRHRDIAVGTSGIPRGRRGGGEDEEDCKVKFETLHSMEHQSDHLDMSSTDEEHTMHTMMITPELLGLLPSSSSNHSDGGVSETDKAGSLTVTKTWTHEDMDAALEALRAGQMSLTKASVSYGIPSTTLWQRAHRLGIHTPKKEGPTKSWNEEILNVALDALRAGSISANKASKAYGIPSSTLYKIARKEGIRLAQPFNASPTAWKPEDLEIALEESAPGRQPCSAPVLNMEYLVAPCMGDDAMVDALEAVRMGQMSINQAAIHFNLPTHPYTADSSESNTRRITLREETGLLWRDMRDITPHLPLISRRAHSRVTILPHSKTPLNLSNNSRRSLNPRLRHLNNKPSTSKPSTSPPHKPRTSALPPRLCSYSIRLPSSRCTPTPVENTGSPICLCKRQAKHALSVPNAELLKPFQVFPSEKQVIFLGKFRAGATLKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00442961;
- 90% Identity
- iTF_00442540;
- 80% Identity
- iTF_00442961;