Dcit012619.2
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- bab2
- Assembly
- GCA_000475195.1
- Location
- CP125325.1:530124-538790[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.3e-15 6.3e-12 46.4 0.0 1 41 412 453 412 456 0.92 2 4 9.8e-11 9.9e-08 33.0 0.1 2 38 467 503 466 508 0.89 3 4 1.1e-14 1.1e-11 45.6 0.0 1 45 521 566 521 566 0.97 4 4 1.3e-10 1.3e-07 32.6 0.0 1 30 573 602 573 603 0.95
Sequence Information
- Coding Sequence
- ATGGCGGGTGCCAACCAGCACTATTGCCTGCGCTGGAACAACTACCAGTCCAATATGACCTCGGTGTTTCATCATCTGCTCAGGACCGAGGCCTTTGTCGATGTGACTCTGGCCTGCAATGAACAGTCACTCAAAGCTCACAAGGTGGTACTGTCGGCGTGCTCGTCCTACTTCCAGAAGCTTCTCATTGAGAACCCCTGCAAGCACCCCACCATCATCATGCCACAGGACGTCTGCTTCACGGATCTCAAGTTCATCATAGAGTTTGTGTATAGGGGAGAAATAGATGTATCCCAGTCTGAGCTACAGTCCCTGCTCAAAACAGCCGACCAGCTCAAGATCAAAGGCCTGTGCGAGGTTCCAGAAGAGAGTCGTAATTCGGGTGATCCCATGGCATCGGCCACGGCTGAAGTCCAACCTCTCGAGCCTCTTCATCATCCTTGCACCTCCACCACAGCCTCACCTCCATCTCAACATCACACCTCACATCATCAACAGGAGGGTGAAATgcaacagcagcagcagaatCATCAGCCGGCCCCGGAGAATGGAAAGCGAGCTTCCACAACACAAAGACAACATCACGCCAAGAGGAAGTACACACGACACGAGAACTCGCACAATACTCCCGCTCAGTCCTCGCCCACTGCACATCAGATTACCTTAAAGaaCGGCCAGCATTGTATGACCATCACGGACGCGGGTGATCATCAGAGTCTCAAATCCTCCAACATAGTCATTCTAACCGAGCCCCCGCCCACCCACCATACCACCCTAATGATACCTACCTCTGCCCATTCCTCACTCACTACGCTACAAACACAGGTTGTGATTGACGGTTCAGAAGTGGACATGGGAGAGGCTACTCCAGCAGGGCCTACCGCTACGCCAGTACCTGTGTGTACTCTGGAGATGTCCCAGCAAACACAGACCTCTCAGCATGCGTCCCCTAGACACCGCGATATCGCAGTGGGCACGTCCGGTATACCAAGGGGCAGACGGGGTGGAGGAGAGGACGAGGAGGATTGCAAGGTCAAATTCGAGACTCTCCACTCCATGGAGCACCAATCAGATCATCTGGACATGTCCAGTACCGATGAAGAACATACCATGCACACTATGATGATCACACCTGAACTACTCGGTCTGctgccttcctcttcctcgaaCCATTCCGATGGAGGTGTCTCAGAGACGGACAAGGCGGGCTCACTCACCGTAACCAAGACCTGGACTCACGAGGACATGGATGCTGCGCTCGAAGCTCTTCGCGCCGGCCAAATGAGTCTGACCAAGGCCTCTGTATCGTACGGCATACCGTCTACCACGCTATGGCAACGGGCCCATCGTCTGGGCATACATACACCGAAGAAGGAAGGCCCGACCAAGTCTTGGAACGAGGAGATATTGAATGTTGCTCTGGACGCGTTGCGAGCTGGCAGTATATCAGCAAATAAGGCGAGCAAAGCTTATGGCATTCCAAGTAGCACCCTGTACAAGATCGCTCGCAAGGAAGGGATCCGACTGGCTCAGCCGTTCAACGCCTCGCCCACCGCCTGGAAACCTGAAGACCTTGAGATAGCACTGGAGGGAATCCGCTCCGGGCAGACAACCGTGCAGCGCGCCAGTGCTGAATATGGAATACCTAGTGGCACCTTGTATGGGCGATGTAAGCGGGAAGGAATCGAGCTGTCGCGGTCTAACCCGACACCTTGGTCCGAGGATGCTATGGTGGATGCTCTGGAGGCAGTcagGATGGGTCAAATGTCCATCAACCAGGCAGCGATTCATTTCAATCTCCCTACTCATCCCTATACGGCAGATTCAAGCGAGTCAAATACGAGGCGGATCACCCTGAGGGAGGAGACGGGTCTATTATGGAGGGACATGAGGGACATCACTCCTCACCTCCCTCTAATCAGTCGCAGAGCTCACAGCAGAGTCACCATACTACCTCACAGCAAAACACCCCTCAACCTCAGCAACAACAGCAGGCGCAGCCTCAACCCCCGCCTCCGCCACCTCAACAACAAACCGTCAACATCCAAGCCCAGCACATCACCACCTCACAAACCTCGCACCTCGGCCCTCCCGCCCAGATTATGCTCGTACAGTATCCGTCTGCCCAGCTCCAGATGTACTCCCACTCCAGTTGAGAACACGGGGTCACCTATCTGCCTTTGTAAGCGACAGGCTAAACACGCTCTCTCCGTGCCAAACGCTGAACTTTTGAAACCTTTCCAAGGTAAAATTTTATATGCCAAAAGCTGCACTTTGAAATCTTTCCCTAAGGTAAAATTTTATATGGACACTACACACTTCGGATGGGAAtgctga
- Protein Sequence
- MAGANQHYCLRWNNYQSNMTSVFHHLLRTEAFVDVTLACNEQSLKAHKVVLSACSSYFQKLLIENPCKHPTIIMPQDVCFTDLKFIIEFVYRGEIDVSQSELQSLLKTADQLKIKGLCEVPEESRNSGDPMASATAEVQPLEPLHHPCTSTTASPPSQHHTSHHQQEGEMQQQQQNHQPAPENGKRASTTQRQHHAKRKYTRHENSHNTPAQSSPTAHQITLKNGQHCMTITDAGDHQSLKSSNIVILTEPPPTHHTTLMIPTSAHSSLTTLQTQVVIDGSEVDMGEATPAGPTATPVPVCTLEMSQQTQTSQHASPRHRDIAVGTSGIPRGRRGGGEDEEDCKVKFETLHSMEHQSDHLDMSSTDEEHTMHTMMITPELLGLLPSSSSNHSDGGVSETDKAGSLTVTKTWTHEDMDAALEALRAGQMSLTKASVSYGIPSTTLWQRAHRLGIHTPKKEGPTKSWNEEILNVALDALRAGSISANKASKAYGIPSSTLYKIARKEGIRLAQPFNASPTAWKPEDLEIALEGIRSGQTTVQRASAEYGIPSGTLYGRCKREGIELSRSNPTPWSEDAMVDALEAVRMGQMSINQAAIHFNLPTHPYTADSSESNTRRITLREETGLLWRDMRDITPHLPLISRRAHSRVTILPHSKTPLNLSNNSRRSLNPRLRHLNNKPSTSKPSTSPPHKPRTSALPPRLCSYSIRLPSSRCTPTPVENTGSPICLCKRQAKHALSVPNAELLKPFQGKILYAKSCTLKSFPKVKFYMDTTHFGWEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00442961;
- 90% Identity
- iTF_00442540;
- 80% Identity
- iTF_00442540;