Dcit021423.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- bab2
- Assembly
- GCA_000475195.1
- Location
- CP125328.1:851216-860382[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-15 5.7e-12 46.6 0.0 1 41 412 453 412 456 0.92 2 4 8.9e-11 9e-08 33.1 0.1 2 38 467 503 466 508 0.89 3 4 9.9e-15 1e-11 45.8 0.0 1 45 521 566 521 566 0.97 4 4 3.4e-17 3.5e-14 53.7 0.0 1 43 573 616 573 617 0.96
Sequence Information
- Coding Sequence
- ATGGCGGGTGCCAACCAGCACTATTGCCTGCGCTGGAACAACTACCAGTCCAATATGACCTCGGTGTTTCATCATCTGCTCAGGACCGAGGCCTTTGTCGATGTGACTCTGGCCTGCAATGAACAGTCACTCAAAGCTCACAAGGTGGTACTGTCGGCGTGCTCGTCCTACTTCCAGAAGCTTCTCATTGAGAACCCCTGCAAGCACCCCACCATCATCATGCCACAGGACGTCTGCTTCACGGATCTCAAGTTCATCATAGAGTTTGTGTATAGGGGAGAAATAGATGTATCCCAGTCTGAGCTACAGTCCCTGCTCAAAACAGCCGACCAGCTCAAGATCAAAGGCCTGTGCGAGGTTCCAGAAGAGAGTCGTAATTCGGGTGATCCCATGGCATCGGCCACGGCTGAAGTCCAACCTCTCGAGCCTCTTCATCATCCTTGCACCTCCACCACAGCCTCACCTCCATCTCAACATCACACCTCACATCATCAACAGGAGGGTGAAATgcaacagcagcagcagaatCATCAGCCGGCCCCGGAGAATGGAAAGCGAGCTTCCACAACACAAAGACAACATCACGCCAAGAGGAAGTACACACGACACGAGAACTCGCACAATACTCCCGCTCAGTCCTCGCCCACTGCACATCAGATTACCTTAAAGaaCGGCCAGCATTGTATGACCATCACGGACGCGGGTGATCATCAGAGTCTCAAATCCTCCAACATAGTCATTCTAACCGAGCCCCCGCCCACCCACCATACCACCCTAATGATACCTACCTCTGCCCATTCCTCACTCACTACGCTACAAACACAGGTTGTGATTGACGGTTCAGAAGTGGACATGGGAGAGGCTACTCCAGCAGGGCCTACCGCTACGCCAGTACCTGTGTGTACGCTGGAGATGTCCCAGCAAACACAGACCTCTCAGCATGCGTCCCCTAGACACCGCGATATCGCAGTGGGCACGTCCGGTATACCAAGGGGCAGACGGGGTGGAGGAGAGGACGAGGAGGATTGCAAGGTCAAATTCGAGACTCTCCACTCCATGGAGCACCAATCAGATCATCTGGACATGTCCAGTACCGATGAAGAACATACCATGCACACTATGATGATCACACCTGAACTACTCGGTCTGctgccttcctcttcctcgaaCCATTCCGATGGAGGTGTCTCAGAGACGGACAAGGCGGGCTCACTCACCGTAACCAAGACCTGGACTCACGAGGACATGGATGCTGCGCTCGAAGCTCTTCGCGCCGGCCAAATGAGTCTGACCAAGGCCTCCGTATCGTACGGCATACCGTCTACCACGCTATGGCAACGGGCCCATCGTCTGGGCATACATACACCGAAGAAAGAAGGCCCGACCAAGTCCTGGAACGAGGAGATATTGAATGTTGCTCTGGACGCGTTGCGAGCCGGGAGTATATCAGCAAATAAGGCGAGCAAAGCTTATGgCATTCCAAGCAGCACTCTCTACAAGATCGCTCGCAAGGAAGGGATCCGACTGGCTCAGCCGTTCAACGCCTCGCCCACCGCGTGGAAACCTGAAGACCTCGAGATAGCACTGGAGGGAATCCGCTCCGGGCAGACAACCGTGCAGCGCGCCAGTGCTGAATATGGAATACCTAGTGGCACCTTGTATGGGCGATGTAAGCGGGAAGGAATCGAGCTGTCGCGGTCTAACCCGACACCTTGGTCTGAGGATGCTATGGTGGATGCTTTGGAGGCAGTCAGGATGGGTCAAATGTCCATCAACCAGGCAGCGATTCATTTCAATCTCCCCTACTCATCCCTATACGGCAGATTCAAGCGAGTCAAATACGAGGCGGATCACCCTGAGGGAGGAGACGGGTCTATTATGGAGGGACATGAGGGACATCACTCCTCACCTCCCTCTAATCAGTCGCAGAGCTCACAGCAGAGTCACCATACTACCTCACAGCAAAACACCCCTCAACCTCAGCAACAACAGCAGGCGCAGCCTCAACCCCCGCCTCCGCCACCTCAACAACAAACCGTCAACATCCAAGCCCAGCACATCACCACCTCACAAACCTCGCACCTCGGCCCTCCCGCCCAGATTATGCTCGTACAGTATCCGTCTGCCCAGCTCCAGATGTACTCCCACTCCAGTTGA
- Protein Sequence
- MAGANQHYCLRWNNYQSNMTSVFHHLLRTEAFVDVTLACNEQSLKAHKVVLSACSSYFQKLLIENPCKHPTIIMPQDVCFTDLKFIIEFVYRGEIDVSQSELQSLLKTADQLKIKGLCEVPEESRNSGDPMASATAEVQPLEPLHHPCTSTTASPPSQHHTSHHQQEGEMQQQQQNHQPAPENGKRASTTQRQHHAKRKYTRHENSHNTPAQSSPTAHQITLKNGQHCMTITDAGDHQSLKSSNIVILTEPPPTHHTTLMIPTSAHSSLTTLQTQVVIDGSEVDMGEATPAGPTATPVPVCTLEMSQQTQTSQHASPRHRDIAVGTSGIPRGRRGGGEDEEDCKVKFETLHSMEHQSDHLDMSSTDEEHTMHTMMITPELLGLLPSSSSNHSDGGVSETDKAGSLTVTKTWTHEDMDAALEALRAGQMSLTKASVSYGIPSTTLWQRAHRLGIHTPKKEGPTKSWNEEILNVALDALRAGSISANKASKAYGIPSSTLYKIARKEGIRLAQPFNASPTAWKPEDLEIALEGIRSGQTTVQRASAEYGIPSGTLYGRCKREGIELSRSNPTPWSEDAMVDALEAVRMGQMSINQAAIHFNLPYSSLYGRFKRVKYEADHPEGGDGSIMEGHEGHHSSPPSNQSQSSQQSHHTTSQQNTPQPQQQQQAQPQPPPPPPQQQTVNIQAQHITTSQTSHLGPPAQIMLVQYPSAQLQMYSHSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00442961;
- 90% Identity
- iTF_00442960;
- 80% Identity
- iTF_00442960;