Basic Information

Gene Symbol
Onecut2
Assembly
GCA_000475195.1
Location
CP125326.1:14979642-14988801[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-37 2.1e-33 115.6 0.6 3 78 351 426 349 427 0.97

Sequence Information

Coding Sequence
ATGGCGGAAGATGGAAGTTTGAGTGAAGAAATCGATAACGCGGCGCATGCTAGGATGAGTGCCATTTCACGATCCGTTGTACCTGCCTTGGTACCAATTCCACACGATGCCTTGGACCTGGGTTCGAACCACAGCAGTGGTAAGGACGACGATAATGAGAGCATCAAGACTGAAGGGTTGACAGTTATAGTAGCACCCCAGGATGATAGTAGGGACTCCGAAATCCTAAGTCCTGGCAAGATCTCTCCCTCCGGAATATCAGTAAGCGTAGCCAGCATAATGGACAGTTCAGAGTTTCGTAACTTACACGCGGAACCTACTTATCAGACACTGACCAATGTGAACGGCAGACTGTCACCACCTGGGTAcagtccgagctcatcctatgCTACCTTGACACCACTGCAGCCTTTACCTCCCATATCCACCATGTCTGATAAGTTTGCTTACGGACACACTGGAAATGTAACAGGATCTTTCACTGTAATGCAAAACAATATCGGTCTCGGTATTAACTCTCATTACACTTACGACAAGATTCAAATGTCTCCGCCTCAACATTACTCTCCCAACAATGGACTTAGTACCATAGTCATCACTCAGGAAAATTCACCCCTATCACCACAAAGTACATATAGTCAAAACGGATTGAATTCCCCACAAAAAAGTCTTTCACCAAACAGCTACGACTCCCCCTATAACCAACGTGATCTCGTTGACCGAAGTGTGTTGGGTGGGGGGTCTCAGAGCCCCACTTTGAGTCCGAATGAGGGCTCTCTCCACTCGTCACCTACTACTCTAGTCACTAATTTCCAAGGTGCTGCCACAATACCTACCATGAATGGCATCACTACAATCACTCCCCATACAGTGGTTGTGTCCCCTCAAACTTCACCTCAACATAGTCTGATTAGCAATCAATTACAGAGGAGTGACTCTCCTGGGCCTCCTAAGATTATATCACAGCAAACCGCCACTCTTACATTGAAGACAGTCACTCCCACAAATGCTGTGGTAGGAGCAGTCAGCCTTGGAAACAGTGGGGAACTGGAAGAAATCAACACCAAAGAATTAGCCCAACGAATTAGTGCAGAGTTGAAAAGGTACAGCATACCTCAAGCAATATTTGCACAGCGGGTCCTGTGTCGATCTCAGGGAACTTTGTCCGATCTGCTTAGAAATCCAAAGCCTTGGTCCAAGTTGAAATCAGGGAGAGAAACATTTCGCAGGATGTGGAAGTGGCTGCAGGAACCAGAATTTCAGAGAATGTCAGCTCTTCGCCTTGCAGCGGCTCAAATTCCACAAAGAGGATCCTGCAAAAGGAAAGAGGAACCGGACATTTCTCAAGACCAGTCTTCTACACCAAAGAAACCCCGCCTTGTCTTCACAGACCTTCAAAGGCGAACCCTACAAGCAATTTTTAAAGAAACCAAGCGACCATCAAAAGAAATGCAAGTGACGATTGCACGGCAGCTGGGCTTAGAACCGACCACGGTTGGCAATTTCTTCATGAACGCCAGACGAAGGAGTATGGACAAGTGGAAGGACGATGATCCTCCGAAGCCAGTTAAGGCGACCATCATAGAAGATCAATCCCAGGGAACGACGGCAATCATTCACACGCAAAGGTTAACCTATGAAGCGATTGAGCGAATAACACCTGATGATTGGAGAAATGCAGTTGATCATTGTCTAAGGGTATCTAAAACTGCCTGGTCAGATGATGAAATGGTTGAACATGTGGTGGATGAGGTCATCATCTCCGTAACAGGAGAAATATCCTCAGAGTCGGAGTCAGAGAGTGATGGTGATACCGATTGGGACGAGAGCATCATGCCCCTCAGTGATTAA
Protein Sequence
MAEDGSLSEEIDNAAHARMSAISRSVVPALVPIPHDALDLGSNHSSGKDDDNESIKTEGLTVIVAPQDDSRDSEILSPGKISPSGISVSVASIMDSSEFRNLHAEPTYQTLTNVNGRLSPPGYSPSSSYATLTPLQPLPPISTMSDKFAYGHTGNVTGSFTVMQNNIGLGINSHYTYDKIQMSPPQHYSPNNGLSTIVITQENSPLSPQSTYSQNGLNSPQKSLSPNSYDSPYNQRDLVDRSVLGGGSQSPTLSPNEGSLHSSPTTLVTNFQGAATIPTMNGITTITPHTVVVSPQTSPQHSLISNQLQRSDSPGPPKIISQQTATLTLKTVTPTNAVVGAVSLGNSGELEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAAAQIPQRGSCKRKEEPDISQDQSSTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDPPKPVKATIIEDQSQGTTAIIHTQRLTYEAIERITPDDWRNAVDHCLRVSKTAWSDDEMVEHVVDEVIISVTGEISSESESESDGDTDWDESIMPLSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00442517;
90% Identity
iTF_00442517;
80% Identity
iTF_00442517;