Dcit036217.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diaphorina citri
Gene Symbol
Arid5b
Assembly
GCA_000475195.1
Location
CP125332.1:20217370-20222823[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-24 5.7e-21 76.1 0.1 2 89 219 304 218 304 0.94

Sequence Information

Coding Sequence
ATGTGGTCTCTCTCGTTTCAGGACGAAGTGCTATCCATCACAGAGAAGGTCGTTCTACGTCTGGAGGATCTGCTGACCTGGTTGACAGAGGATGCAGACTGGAGTTGGGGTTTGGGCGCCATCTGGCAGGGTGGCGTAGACATGAAGAAAACGTCCACACCTACCTCGCTCAATTCACTCAATGCCTGTTCCAACATTGACTTCTCCGAcgtggaaaaggagaaggaatcaTTAGGTGTCCAACACTATGAAACACACCGAGGTGTCATAGTCCTCAGCTTCACTAGGTATTGTCGCTATCGTGGCCTTCTGAGGAGATTTGAAGGCGTGGACAACAAGTGGCTGAGGTCAGATGACGTCATAGCTCTAGGAGGGTTCTATGTGCCGTACAAAAATACCAAAGTCCTCTTCTGCAAGGACACGTTCGACTATCCCGACCTAGAAGGACATGAACTGTTGTGTAATCATTTAGCTCCCAAATACAAAGGCCGGACGAAAAAGCGCAAGAAGTTGCTCATCACCAATGTGGATTCGGACAGTGGCTCAGAATCTTCCTCCACAGTATCCTCTACCAACAAGAGCCCCAACAAGTCTGGCCTTCGCGTTCGTCTCAATCCATCACGCAAGAGTCCTCGCATTTCAGACTCTCAACATGAGCGAGACTTCCTGCACAAGCTGTACCAGTATATGAAGACCCGCAAGACACCCATTGGGAAAGTGCCCACCATTGGCTTCAAAGAATTGGACCTATACAAGTTGTTCCACAAAGTAAAACACCTGGGAGGTTACGAGGAGGTTACTACGGGTAGACTATGGAAGTATGTGTTTGCTGAGGTCGGAGGAGAACAGGGCACTACCAGCTCTGGAACTCTGAGTAGGAAACACTATGAGAGATTACTGTTACCATATGAGAAATATCTGAATGGAGAGGTAGACAAGGATAGTCCGAGTACCAACGCTAAATCCACTAACAAAACAGGCCAGACGCCCAGCAAGGGCAGCAAAGTTAATGGCAATGTGTCTATCAATAGTGGCAGTATGGGTAAAGCCAAGGACAAAGATAGCACGCCAAAGAGTCCGAAGGAATCGCCTGTCATTACCCTGGAGGAATCTTCGAACAGTTCGAGCAATTCCAATTCCAACTTGACTGTGTGTGGAAACGGCACGgaTAAACCTTCCAATTTCTCAATGGTGAAACGGAAGATTGTAATGGAAGGCAACTCATCCTCTCTAAGGAACGCCAGGCTCAAGTTAGAGAAACCTCAGAATGGCGAAACCCTCGATACGAAACCCAATGGCAATGAAACCAATATCCCTCCTAGCCTGGAACTGAAACCTGACATCAAGTCTAACGGCCAAGTAACACCACCGCGCGATAAGGAAAATATTCCGCTTGTAAATAAAACAGGAGAGAAAAGACTTGCACCCCCTGAGGTGATAGACATCACTGATGATAATGGACCTCAGAGTATGAACGCCTATAAGAAACAGAAGCTAGACATCCTCAAGTATCAAGGACTAGAAGTAACACCTGTCTCCTCAGAAGATGTCAAACCTCCCATCGCACATCCCCCACCTAACCCCCCACCTACCCCTATCATAACATCTCAGGGAGACTTTCACCAGAGAGAACGTAACAAGATCTCCATCACAGTCACCCCTGATGTTAGTCTACTTCTCAAACCTCAGACCTCCCCTGTCACTCCTCCCCCTCGACCCTCCTCCACACCCAAGGTATTCTCCaaccctcctctctcctctaatCTATTCACTCCCTATCAGCATGGAACCAAAACAGTGTACGGAAATCCGAAAGATGTGTTCAGCAATCCAAAAGAAACACCAACTTTCGCCTCAGCTCCGAAAGAAGTGTATAATAATCCTAAAGATTTGTTCAATGCGTCGAAAGAGGTGTACAATCCAAAAGACTTGTTCAATAATTCGAAAGATTTGTACAATAAGCCTAAAGATTTGTTCAATAGTCCAAAAGAGATATACAGCAATCCAAAAGATTTATTCAATAATCCTAGAGACTTGTTCAAGGGTTCCAAGGATATGTTGTATAATAATCCAAAAGATTTATTCAATAGTCCTAAAGATTTCTACAATAACCCTAAAGATTTGTTCAATAGTTCTAAAGAGATGTACAATAATCCAAAAGATTTATACAAAAATCCAAAGGACTTATTTAATACCCCAAAAGATTTATACAACAATCCACCTAAAGATTTGTTGTATAGTAATCCTAAAGATATATTCAACTCATCCGTACCGAAAGACATTTTCAGTTCCAAGGATACATTTAGCAAATCAAAAGATACTTTCAGTCCAATCAGTACAAAAGATAGTTTCAATAATGCAAATAGTTTGAAAGACATGTTCAGTCCGAATAACTTGAAAGAACTGCTTAATAACCCTAGCTTTAGAGACATGCTAGGTAATCCAAATTTCAAAGACTTCTTTAGTAATCCTAGCTTAAAAGATGTGTTCAATGTGAATAGTAATCCTAACAAAGACTTgctcctctctccctcacctACCAAGTCCAGCACCTACCTCAGCCCCTCCAAAGACAATACATCACATTATCAACACCAGCAACGTTATAATAACTCTTTGCTGATGAAAAGTGGAACCACGACATCTCCTAATCAAAATGCCTGTGATGATGTGCTTGATTTGAAAGTGAAGCCACACCCAAGTATTCCTGCTACACTAAGTGCTAGTGGTCACTCACTCAAGAGAACCCCTCAGACACAACATCAGCAGCAGCAAGATGAAGTATTAGACCTAACAGTGAAGagtggaaagaaggaagataCCTCCTCGTACCCCTCTGCTTCTAATCTAGAGATTACACTGTTACCCCCTAGTCATCGGCCTTATGATATGAAACGTCCCCTCCCTGTACCTCTCACTAGACctacccctccctcctcccGCTCCTCAGTGAGTCCCAAGTTTGATCATAGCAAACATACTGCCACTTCTCCTAACCTGCATAGCAAGACAAACCATGCATTGAATCAGCATAACTTCAAGAAGAACTTGCTAGTGATTCCCCCTACCTCTCAGTCTATTACCTCCCATAGTTCCAACTCCTCCAACAGATCCAAACGGAAATCTTCATCCTCTGTGCCTATCCCTCCTACCTCCCGTGCCTCGTCTACATTCCCCTCCCATAGTAAAGCAGCCACCCCCTctaccccctcctcctcctcctcctcctccccattcAGTAACCACCTGGCTCAGGCTCAGAATGCTAAGAGTCCTTACATGCCTATGTTAGATCCCATGTACTTTGCTGCACTGTATAGTGGTCTATTCCCTCCTAACTTCATGACCCCTGCTGCTGCCGCGCTCTTTACTCCCCCAGTGTCAGGGGGAGCAAGCAATGCGAACAGCACAGCACAGGATGCTGCTCTCAAGATCTATAAAGAACTACTCCAGGCACAGAATAGTTCCTTGTTTCCTAACTTGTTCAATGATGGGGCTACCTCTATCTCCCTGGTAGGGAATAATAACAAGCCATCTCCCAAGTGA
Protein Sequence
MWSLSFQDEVLSITEKVVLRLEDLLTWLTEDADWSWGLGAIWQGGVDMKKTSTPTSLNSLNACSNIDFSDVEKEKESLGVQHYETHRGVIVLSFTRYCRYRGLLRRFEGVDNKWLRSDDVIALGGFYVPYKNTKVLFCKDTFDYPDLEGHELLCNHLAPKYKGRTKKRKKLLITNVDSDSGSESSSTVSSTNKSPNKSGLRVRLNPSRKSPRISDSQHERDFLHKLYQYMKTRKTPIGKVPTIGFKELDLYKLFHKVKHLGGYEEVTTGRLWKYVFAEVGGEQGTTSSGTLSRKHYERLLLPYEKYLNGEVDKDSPSTNAKSTNKTGQTPSKGSKVNGNVSINSGSMGKAKDKDSTPKSPKESPVITLEESSNSSSNSNSNLTVCGNGTDKPSNFSMVKRKIVMEGNSSSLRNARLKLEKPQNGETLDTKPNGNETNIPPSLELKPDIKSNGQVTPPRDKENIPLVNKTGEKRLAPPEVIDITDDNGPQSMNAYKKQKLDILKYQGLEVTPVSSEDVKPPIAHPPPNPPPTPIITSQGDFHQRERNKISITVTPDVSLLLKPQTSPVTPPPRPSSTPKVFSNPPLSSNLFTPYQHGTKTVYGNPKDVFSNPKETPTFASAPKEVYNNPKDLFNASKEVYNPKDLFNNSKDLYNKPKDLFNSPKEIYSNPKDLFNNPRDLFKGSKDMLYNNPKDLFNSPKDFYNNPKDLFNSSKEMYNNPKDLYKNPKDLFNTPKDLYNNPPKDLLYSNPKDIFNSSVPKDIFSSKDTFSKSKDTFSPISTKDSFNNANSLKDMFSPNNLKELLNNPSFRDMLGNPNFKDFFSNPSLKDVFNVNSNPNKDLLLSPSPTKSSTYLSPSKDNTSHYQHQQRYNNSLLMKSGTTTSPNQNACDDVLDLKVKPHPSIPATLSASGHSLKRTPQTQHQQQQDEVLDLTVKSGKKEDTSSYPSASNLEITLLPPSHRPYDMKRPLPVPLTRPTPPSSRSSVSPKFDHSKHTATSPNLHSKTNHALNQHNFKKNLLVIPPTSQSITSHSSNSSNRSKRKSSSSVPIPPTSRASSTFPSHSKAATPSTPSSSSSSSPFSNHLAQAQNAKSPYMPMLDPMYFAALYSGLFPPNFMTPAAAALFTPPVSGGASNANSTAQDAALKIYKELLQAQNSSLFPNLFNDGATSISLVGNNNKPSPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-