Basic Information

Insect: Diaphora mendica
Gene Symbol: -
Assembly: GCA_949125395.1
Location: OX421310.1:15147728-15159314[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.19 25 7.0 0.3 2 23 344 366 343 366 0.96

2 12 0.00027 0.037 15.9 1.6 2 23 371 392 370 392 0.97

3 12 0.23 30 6.7 3.2 2 23 396 416 395 417 0.94

4 12 0.89 1.2e+02 4.9 0.6 1 23 422 445 422 445 0.92

5 12 0.13 17 7.5 0.1 2 23 503 525 503 525 0.94

6 12 0.079 11 8.2 4.4 1 20 547 566 547 568 0.91

7 12 0.0002 0.028 16.3 0.6 1 23 576 599 576 599 0.97

8 12 7.3 9.9e+02 2.0 0.3 2 19 605 622 604 627 0.68

9 12 0.0005 0.067 15.1 0.3 2 23 637 658 636 658 0.95

10 12 0.044 5.9 9.0 0.2 2 23 683 703 683 703 0.95

11 12 3.4e-05 0.0046 18.7 2.7 2 23 709 730 708 730 0.87

12 12 1.9 2.5e+02 3.8 0.6 3 23 736 755 735 755 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.19	25	7.0	0.3	2	23	344	366	343	366	0.96
2	12	0.00027	0.037	15.9	1.6	2	23	371	392	370	392	0.97
3	12	0.23	30	6.7	3.2	2	23	396	416	395	417	0.94
4	12	0.89	1.2e+02	4.9	0.6	1	23	422	445	422	445	0.92
5	12	0.13	17	7.5	0.1	2	23	503	525	503	525	0.94
6	12	0.079	11	8.2	4.4	1	20	547	566	547	568	0.91
7	12	0.0002	0.028	16.3	0.6	1	23	576	599	576	599	0.97
8	12	7.3	9.9e+02	2.0	0.3	2	19	605	622	604	627	0.68
9	12	0.0005	0.067	15.1	0.3	2	23	637	658	636	658	0.95
10	12	0.044	5.9	9.0	0.2	2	23	683	703	683	703	0.95
11	12	3.4e-05	0.0046	18.7	2.7	2	23	709	730	708	730	0.87
12	12	1.9	2.5e+02	3.8	0.6	3	23	736	755	735	755	0.90

Sequence Information

Coding Sequence: ATGCACCTCTTCAACTTCCAGTATGTGGAAGTTTCTCGGAACACTAGGTATAGTAAGCAACAGCGCCCTGAGGTTAAGATGACAATCAGTTTAGATGATATCAACCGTCATTTCTCAGCCACACCCCAATTGAATCATGAAAaCACACCTGAAATTGAATTGCCAAGAGAGTGTGCGAAAGAAGCCGATTCAACTGAGACTGTCAGTGAAGCTGATGAGCTTGAAGTGACAGAGTCCGAGCCTAATGAAACACATGACACACCAGCTGACAAACCTCGACCTGTGAAGCAAGTACTTCAGTTGCGTTTAATAGACGATGAAGGTGTTTGTGATGAACCAATATACGAAGTTCTGACTGATGATGAAACCGCCAAGGAAGTGGACAAGAAACAAACAGCGACACAGACTGACGtacaaAATACGTATTCAAGTATAAATGATCCGCCGAGCAAGGAGAGCGATGTTCAATCTGCATTACTAGCTACATCAGCCGAGAGAACAGCCCCGACATGTGACAAGTACACCAACAAGGAATACTGGAAGTTGAAGCTGAAGCTCATCCTCCAAAACACGCAGTTCTGTGGAGTCTGTTTAGAGGCTGACGTCAACATGAACGCGCTCTCCCATGTGTTTGAGATCACTGATGATGAAAGGACTTGGAGCACATCTCTCGCAGACATTGTACATACGGTTTTTAGAGAGAAAGACCAGAGGGGGTATTGGCCGGCTAACTCACAAATATGCAACTATTGTACAAAGAAACTAATTCagtcttatatatttatacgcAATGCTGAAGAGACATCAAGAATGCTGGAGCGTCACTTAGATGAGTTGTACACTAAAACTTGTTACGTGCGTAACAAATCTCTGAAAGATGCCAACAGCCCACAACCAAGGATATACAATGTTGTTATTGCATTAGACAATAATGTGATTTCACAGAACTTTGAAAGTAacgaaattaaaatagaaacaccGGAACCAGTGCAATATGAAAGAGGTCAGATTCGCAACAAAAGAAAACTGAGGTGTATGAGTTGTAATGTGGTTGTACGGTCGTACAGAGCTTGGAGGAGGCACGAGAGAACAGCTCACAAACAGAGTGTCAGATGTAGAATATGTCTCCAGAGCTACAAGACACAGCGGGCCTTGACTACACATTACAGGACGCATTTGAGGTCGCGCTGTCCGTTTTGTCACAGAACTGTGCGAGATGGTGCACTGTTGCAACATTTGAAGACGCACCACAAACACTCGATACACTCGTGTACGACGTGTAATGTCGCTCTCTACTCCGCCGAGGCTCTAGGGACTCATATAGAGGAGTGTCATCGTAGAGAGGGTTCTAAATGTGTGACGTGTCTGCAGAGTTTGTCGCGAGTCGAGTTGGAGCGGCACCAGTGCAGGTTCAAGTGTCCGGAGTGTGAGGAATTGCCTTGTGTCCATCACCGGCACCTGATGTGGTACAGAGAGCAGATGGACCTGGAGCCTGGACCCAGGGCCAAGTGTGCGGACTGTCGCTACGTGGCGTCCAGCAAGCAGGCGCTGTTAGCCCATGTCAACGCAACACATCTCAGTTTACAGCGCCTCTGTCGGCCAGCTCTGACTGCATCTGACAACGACAACAAACACCTCCACGAGTGTCGATATTGTGACAAGGCATTCAGCAATTTGTACATGTGTAAACGACACGAGaaattctgtaaagttgttCAAAGAAAGTATCAATGCGACGATTGTCCAGCTAATTTTGATTCGACAAAAGATCTCATGAAACATAGAAAACTCACGCACGGCAAAGAGTTCCTCTCGTGCAGGTTATGTGACAGAGTGTTTCTAAACGACCTGAAGAGGACGAGACACGAACGGCAAGCCCACGGCGAACAGCGAGGAAGGGCGAGCTTAGTCTGTGCGGCGTGTCACACTGAGTTCTCCTCGAAGGCGGCCTTGGAACTGCACATGAGATACCATGGAGCTGAAGCAATTGGTCAGCTCGACAGTTTGGAACAGTTCAAGAGTCACAGACGCAGACGTTCGTTTGCGGTGTGCGAAATTTGTGGCGCAGTGATGAGGCGGACTCTGTTAAAGAAACACATGAAAGGCCATTCTATGGCGACAGTGTCGTGTAAAACGTGCGGCAAATCTTTCCAGAGCTCGACTTTACTGAGACATCATCAGAGTATTCACGCGAGGACTGCGCCGTGTCCTAGATGTAAGAAATTGATTAGTTCTGCAAAGTTATGGCGACACTTCAGGAATCACCTCATTCGAGACCCTCTTAATGTCAAAGTTGCAGCAATACATGCTCTATGA
Protein Sequence: MHLFNFQYVEVSRNTRYSKQQRPEVKMTISLDDINRHFSATPQLNHENTPEIELPRECAKEADSTETVSEADELEVTESEPNETHDTPADKPRPVKQVLQLRLIDDEGVCDEPIYEVLTDDETAKEVDKKQTATQTDVQNTYSSINDPPSKESDVQSALLATSAERTAPTCDKYTNKEYWKLKLKLILQNTQFCGVCLEADVNMNALSHVFEITDDERTWSTSLADIVHTVFREKDQRGYWPANSQICNYCTKKLIQSYIFIRNAEETSRMLERHLDELYTKTCYVRNKSLKDANSPQPRIYNVVIALDNNVISQNFESNEIKIETPEPVQYERGQIRNKRKLRCMSCNVVVRSYRAWRRHERTAHKQSVRCRICLQSYKTQRALTTHYRTHLRSRCPFCHRTVRDGALLQHLKTHHKHSIHSCTTCNVALYSAEALGTHIEECHRREGSKCVTCLQSLSRVELERHQCRFKCPECEELPCVHHRHLMWYREQMDLEPGPRAKCADCRYVASSKQALLAHVNATHLSLQRLCRPALTASDNDNKHLHECRYCDKAFSNLYMCKRHEKFCKVVQRKYQCDDCPANFDSTKDLMKHRKLTHGKEFLSCRLCDRVFLNDLKRTRHERQAHGEQRGRASLVCAACHTEFSSKAALELHMRYHGAEAIGQLDSLEQFKSHRRRRSFAVCEICGAVMRRTLLKKHMKGHSMATVSCKTCGKSFQSSTLLRHHQSIHARTAPCPRCKKLISSAKLWRHFRNHLIRDPLNVKVAAIHAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00442067;
90% Identity: iTF_00442067;
80% Identity: -