Basic Information

Insect: Diaphora mendica
Gene Symbol: -
Assembly: GCA_949125395.1
Location: OX421311.1:10810382-10818898[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.1 1.5e+02 4.5 1.5 2 23 190 211 189 211 0.94

2 20 0.00023 0.031 16.2 1.2 1 23 215 237 215 237 0.97

3 20 0.01 1.4 11.0 1.7 1 23 242 265 242 265 0.97

4 20 0.0029 0.4 12.7 0.4 2 23 273 295 273 295 0.93

5 20 0.00059 0.079 14.9 2.8 1 23 302 325 302 325 0.96

6 20 0.00028 0.038 15.9 1.3 1 23 331 353 331 353 0.97

7 20 1.1e-05 0.0015 20.3 5.7 1 23 359 381 359 381 0.99

8 20 0.1 14 7.8 4.6 1 23 387 410 387 410 0.98

9 20 0.13 18 7.5 0.2 2 20 511 529 510 531 0.93

10 20 1.8 2.4e+02 3.9 0.4 2 23 556 577 555 577 0.95

11 20 4.8e-05 0.0065 18.3 0.9 1 23 581 603 581 603 0.98

12 20 0.035 4.7 9.3 2.4 1 23 608 631 608 631 0.96

13 20 0.22 30 6.7 0.3 1 23 712 738 712 738 0.86

14 20 5.1 6.9e+02 2.5 1.2 3 23 768 789 767 789 0.95

15 20 0.089 12 8.0 0.7 2 23 810 831 809 831 0.95

16 20 0.31 42 6.3 0.2 1 23 835 857 835 857 0.96

17 20 0.18 24 7.0 0.9 1 22 862 883 862 885 0.87

18 20 0.00042 0.057 15.3 1.0 2 23 922 944 921 944 0.96

19 20 2e-05 0.0027 19.5 1.2 1 23 951 973 951 973 0.98

20 20 0.00015 0.021 16.7 2.8 1 23 979 1001 979 1001 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.1	1.5e+02	4.5	1.5	2	23	190	211	189	211	0.94
2	20	0.00023	0.031	16.2	1.2	1	23	215	237	215	237	0.97
3	20	0.01	1.4	11.0	1.7	1	23	242	265	242	265	0.97
4	20	0.0029	0.4	12.7	0.4	2	23	273	295	273	295	0.93
5	20	0.00059	0.079	14.9	2.8	1	23	302	325	302	325	0.96
6	20	0.00028	0.038	15.9	1.3	1	23	331	353	331	353	0.97
7	20	1.1e-05	0.0015	20.3	5.7	1	23	359	381	359	381	0.99
8	20	0.1	14	7.8	4.6	1	23	387	410	387	410	0.98
9	20	0.13	18	7.5	0.2	2	20	511	529	510	531	0.93
10	20	1.8	2.4e+02	3.9	0.4	2	23	556	577	555	577	0.95
11	20	4.8e-05	0.0065	18.3	0.9	1	23	581	603	581	603	0.98
12	20	0.035	4.7	9.3	2.4	1	23	608	631	608	631	0.96
13	20	0.22	30	6.7	0.3	1	23	712	738	712	738	0.86
14	20	5.1	6.9e+02	2.5	1.2	3	23	768	789	767	789	0.95
15	20	0.089	12	8.0	0.7	2	23	810	831	809	831	0.95
16	20	0.31	42	6.3	0.2	1	23	835	857	835	857	0.96
17	20	0.18	24	7.0	0.9	1	22	862	883	862	885	0.87
18	20	0.00042	0.057	15.3	1.0	2	23	922	944	921	944	0.96
19	20	2e-05	0.0027	19.5	1.2	1	23	951	973	951	973	0.98
20	20	0.00015	0.021	16.7	2.8	1	23	979	1001	979	1001	0.95

Sequence Information

Coding Sequence: ATGAAAACTGCTAAGgtgaatgatgatgataaagaaaaaaatgtaacagaggTACTGATGAACATCGAAAATAAGGGAAATAAGGGAATTGATGCAATAGATAGACTTATCAATGCAGATCAAGTTAGAATTAAATATAAAGCTCTAGTTGATGCAAAAttcaagaaagaaagaaaagagcCCGAGAAAAATGACGTCCACGAAATGAACAAACACAAAAGTAACATCAGAAATATTCTAGAATATTCCAACGCTACAATGGTCAAAGGTTTTTGGGGAAATGGTTATATGTGTTGTTTTTGTAATGTCCAGAAAAAAATGCCCTCAGAATTAAAAGCTCATAATCTTGAAGCGCACAGCAGTTTCGAAGATgatgtcttaaaattaaaatatatttcgacTTTGTTCATACGATTAGACATTACTAATCTCAAATGTAAATTATGTGAAGATAATATAGACAGCTTAGAGCTATTAATGGATCATTTGGCCAAAGTACACGATAAAATTATGCACAgtgatataaaaaaacatttaattccATTTAACTTTGAAAATAACACATTACAATGTGTCAAGTGTAAGaaacaatttcaatattttaaaattttatcagaACATATGAACGAACATTATAGAAATTACGAATGTTCAATATGCGAGCGTGCTTTTATCACCAAAGAAACTATGCAAAGACATTTTTACAGGCACATTAGCGGTGTTTTCAAATGCTCTTATTGTCCAAAAGTTTTAGacacgaaatataaaaaatttgtCCATGAGCGTGTTACGCACACATGGCTAAATAAAACGCGAAAATGTAATTACTGTGACGAAAGATTTTCATCAAAAGATGTAGTGTTGAGGCACGAAGCGAAAGTCCATGGAGCCAAAATTCCAGTTTTCAACTGTCAAGCGTGCAATAAGTCTTACAACAGTCAGAGTTCTTTGTTGACACATAGAAAACGTTTCCATCTAATGCTAAGACCACACAAATGTTCGTACTGCGACATGGCATTTTATTCTAGGATGGAATTAAGGGCACACGAAGTAACTCACACGAAAGCTAGAGATTTCAAATGTGATGTGTGTGATAAATGTTTTGGTACACGGTGTACTTTAAATCAGCACATGAGGATCCATTTGGACGATAGGAGGTTCAAATGTGAAAGTTGTGACAGCGCTTTTTTATATAGGACGCATTTTAAAGTGCATATGAGGAGAAAACATGACGGCCAATGGAAAAAGGCTGAGGGCACAGCTGAAAGACGGACAGATTCCCAAAAAGTTTTAAACAGAGAAATCCTAGTTAAATTCAAGGAAAATGTTAGACATATTCTAGAAAATTCCAACGCTACACCCGTTAAAGGCCACTGGGGGGTTGGCTATGGGTGTTCCTATTGTCCGTACCAGAATCCCTCGGCTATAGAACTTAAAACGCATGCTCTGAATACACATCCAGACGTCACAGAAGCTCTTAAAGTTAAAAGCTATGTGGATCTCATTATAAAATTAGACATGACTGGACTCCAATGCATGATTTGCTTTGAAAATTTTGCATCTCTGAGCAAGTTCACGGAGCATTTAACTCTAATCAATGACAAAGAAATGTCTACCAACAGAATTAATCACATAATACCTTTTAGATTCGACACTGAGTACCTGCAGTGTGTAGTATGTCTAAAACAATTCGATTATTTCAAACCATTGAGTGAACATACGAACGAACATAACAGAAACTATTCGTGCGATATTTGCGGCCGAGGCTGCATTAACAAAAGAGCTCTGAAAAATCATCTAATTCGCCACAAAAAGGGCgtgtttatttgttgtttttgttcCAAAGTCTTCGACACTAGGATCAAGATGAGAGAACACGAAAGAGTTCTTCATATCAGAGCGTTAAAGACTCGTAAATGTGGATATTGTGATGAGAAATTAATGGATCGTGTTAGGAAAGCGAGCCACGAGGTGTCAGTATACGGAGCGCCGACTCCATCTTTTGAATaccAACAGTCTGAATCTCTGGATGAGAAGGCagttaacaaagaaaaaatgtaCCAGATGATACAAGAAGTAAAAACAATCCTGACATACACAAACGCCACTCCGTACAAGTCCAAAGCGAACAGATACTACTGCGCGTACTGCTCCACAGAAGGACCCTTCTTCAAAGAGGCTGATGAACTGAGAACCCACACGAGAACAGAGCACGTGAACGACAGAACCCACAAAATTGAATATGCGTTACGACCTCATTGGATGAACGAAACCCTAAAACTTGATATCGATAATCTTTTATGTAACGTGTGCTGCACGCCACTGTCAACATGGAATGACATGTTTACACATTTAAAAGTACAGCACAAAATCATCTTAGATCAAGCATACACTCGCGTTATACCATACGTACTGACAAATGACTTACATTGCGCGTTTTGCAAAGAAGGTTTTACTAACTACATGCAGTTAGACGGCCATATGAACGCTCATTACAATAATTACGTTTGCGAGGACTGCGGCGATACGTATCTAGCTGCGAGTAGGTTGAAAAAGCATAAAAAGATCCACGAAATTGGGAGGTATCCTTGCTCTTCGTGTTCAAAAGTGTTTAGTCTAGAGAAGTACAGGAAAAAACATGAAGACCTTGTCCATAAACAAGCAACTAAATTCAAATGTTGGTACTGCGAAGATCGTTTCTCTGGAGAATATTTAAGACATCTTCACGTTCTGGACAAGCATAAGGAGAAAGTGAAGAATATCACATGTGAACAGTGTGGTAAGACGTTCACATGGCGTCCTTATTACGTCAAACATATGCGGAGAAAGCATACGGAGGACCCGAAGAAGTTTAGTTGTCTGGAATGCGATAAGAAGTTCTTTCAACCTTTTGAGTTGAAGGAACACATGTTACGGCACACGGGGGAGAAACGCTTTCCTTGTAAGTTATGCAATAAGAGATTTATTTCCTCGGCTTCGCTCAAGCATCATTACTATTGGCACAAGAAAAAAGATGGTGTACAATTGATTAACATTGATTAG
Protein Sequence: MKTAKVNDDDKEKNVTEVLMNIENKGNKGIDAIDRLINADQVRIKYKALVDAKFKKERKEPEKNDVHEMNKHKSNIRNILEYSNATMVKGFWGNGYMCCFCNVQKKMPSELKAHNLEAHSSFEDDVLKLKYISTLFIRLDITNLKCKLCEDNIDSLELLMDHLAKVHDKIMHSDIKKHLIPFNFENNTLQCVKCKKQFQYFKILSEHMNEHYRNYECSICERAFITKETMQRHFYRHISGVFKCSYCPKVLDTKYKKFVHERVTHTWLNKTRKCNYCDERFSSKDVVLRHEAKVHGAKIPVFNCQACNKSYNSQSSLLTHRKRFHLMLRPHKCSYCDMAFYSRMELRAHEVTHTKARDFKCDVCDKCFGTRCTLNQHMRIHLDDRRFKCESCDSAFLYRTHFKVHMRRKHDGQWKKAEGTAERRTDSQKVLNREILVKFKENVRHILENSNATPVKGHWGVGYGCSYCPYQNPSAIELKTHALNTHPDVTEALKVKSYVDLIIKLDMTGLQCMICFENFASLSKFTEHLTLINDKEMSTNRINHIIPFRFDTEYLQCVVCLKQFDYFKPLSEHTNEHNRNYSCDICGRGCINKRALKNHLIRHKKGVFICCFCSKVFDTRIKMREHERVLHIRALKTRKCGYCDEKLMDRVRKASHEVSVYGAPTPSFEYQQSESLDEKAVNKEKMYQMIQEVKTILTYTNATPYKSKANRYYCAYCSTEGPFFKEADELRTHTRTEHVNDRTHKIEYALRPHWMNETLKLDIDNLLCNVCCTPLSTWNDMFTHLKVQHKIILDQAYTRVIPYVLTNDLHCAFCKEGFTNYMQLDGHMNAHYNNYVCEDCGDTYLAASRLKKHKKIHEIGRYPCSSCSKVFSLEKYRKKHEDLVHKQATKFKCWYCEDRFSGEYLRHLHVLDKHKEKVKNITCEQCGKTFTWRPYYVKHMRRKHTEDPKKFSCLECDKKFFQPFELKEHMLRHTGEKRFPCKLCNKRFISSASLKHHYYWHKKKDGVQLINID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -