Dmen018056.2
Basic Information
- Insect
- Diaphora mendica
- Gene Symbol
- -
- Assembly
- GCA_949125395.1
- Location
- OX421317.1:3725813-3746316[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0002 0.028 16.3 1.6 1 22 292 313 292 316 0.92 2 12 0.00097 0.13 14.2 1.9 2 23 436 458 435 458 0.94 3 12 0.0063 0.86 11.6 0.0 1 23 464 486 464 486 0.95 4 12 0.052 7 8.7 0.1 1 23 1388 1411 1388 1411 0.89 5 12 5.3e-07 7.1e-05 24.5 3.5 1 23 1416 1438 1416 1438 0.98 6 12 5.6e-05 0.0075 18.1 1.8 1 23 1444 1466 1444 1466 0.98 7 12 0.00025 0.034 16.0 4.9 1 23 1472 1494 1472 1494 0.98 8 12 1.5e-05 0.002 19.9 0.3 3 23 1502 1522 1500 1522 0.97 9 12 0.022 3 9.9 2.2 1 23 1528 1550 1528 1550 0.96 10 12 9.6e-05 0.013 17.3 0.2 1 22 1556 1577 1556 1577 0.96 11 12 0.00012 0.016 17.1 0.8 1 23 1607 1629 1607 1629 0.98 12 12 1.3e-05 0.0018 20.0 3.6 1 23 1635 1658 1635 1658 0.96
Sequence Information
- Coding Sequence
- ATGGAAGTATATCTTTACAATTCTACTGTTTGTAGATTATGTGGGGAAGAAAATGATAATGGAACATTATTGTATTCTTCTGAAGAAAATCGTCCGAACTTAAGTGAagttattaatacatatttgcCACTTAAGGTATTCGATGATGGACAATTACCTCGAACAATCTGCCCTGGATGCGCTATTCAGTTGGAGGCCACCGTAGAATTTTTAACACTAATTATCAATGGACAGAAAGTCATTCGGCAGCTACATTTGAGAGAGAGAGAATATAAGAAAACAATCCTAAATCCTACGCCTGAACAAGATGTTATTACAGAAAAAATTGTTTACGAAGTAAACACAAGCAATGGAGTATACCAAGTGGAACACCCTATTGCATTACAAGTTGCTGGTCTCGACAAACCAAAACGTAAACGTGGCAGGCCACCTAAGAAAGTCAAAACTCCTGAAGAGTTGGCTGAAGAAGCAGCTGCAACAGCAAAGGAGTTAAATTCTGTAAGAGTATCTGATAAGGAGGAGGAGCCTACTGGAAAACGGAGAAGGAAAACACCAACTAGATTTAGAGAAGCTGTCCAGGGTaaagaacttgaaagaataTTTAAAGAAGAAGGAGTGACTGATGGCGAGGAGAGTGACCGTGAGATGAAACCTAGTCTTGACATTGAAGTGAAGGTTCCTGTGTCAAAAGAGCCAGAAATTATAGGTCATATGGAGAACTCTGGAGAAGTGGTGGTCTTTGTCAAAGGCAAGGGTAGGGGTAGACCAAAAGGTCCAATGCGGTTAACGCGCAAAGAATGTGCAATCTGTGGTATGGAGTTCTCCTGTGCTGGACGTTACATGTCTCACGTTGCACACCATGGACCAGTGATATACCAATGTGGCCAGTGTAATAAGACCTTTGACACTCGGCTTAACTTCACCAACCATCAGAAAGAGCTGGAACATGTTGGACAGAATGTTATCCCAATTGGCAAGAAGAATACTAAAAATATACAGAACATATCAGAAATGATAAATATGGAAACACAAGCTGCTAACATTCAGGCCATAACAGAGACACCTGATGTGGCAGTAAATATGCTAGTAGACAATGTGATGACAGCCCTACCTGACCTAGGCACACAACCCGACAATGAAGCTGAACAAATGCTCACTGACAACCTCACAACTGAAATAACTTCTAGTCCAACTGTTGAAGGTGCTGTTAAAATTATGGATACATCCCCCGATGTAGTTGAGGTTACTGAAAAGTCTGATGAGGTGGAACATGTGGAGATTGTACCTGCAGGGAAAGTGAGACTGAAATGCCCGCACTGTGAGAAAACATTCAGTAATAAGCAGAGCAAGTCATTGCATATTAAGGCAGCTCACGTGGGCGAGCGTCCGTACGTGTGCGGCGAGTGCGGTGCGCGCTTCGCCTACCCGCGCTCGCTGGCGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTAAACCACACCCTAGCTACGTACTACCCACTAGCCACCCACTGTCCACCCACTACCCACTAGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGCCGCAGCTGCACGCCGTGTCGCACCGCCGCCAGCGCCCGCGCGGGACCCGCGGGTACGCCTGCGACCTCTGCGGGAAGGTTCTGAATCATCCGTCCTCGGTTGTATACCACAAGGAAGCTGAGCACGCAGGCCAACGATACGTTTGCAATAAATGCGGCAAGTCCTTCAAACACAAACAGTTATTGCAAAGACATCAACTCGTTCACTCCCAAGTCAGACCTTACACTTGCaagACATGTGAAGCTTCATTTAAAACTAAGAGAAACCTACTTAATCATCAGCTGTTACATACGGGCATCAAAAAGTTCTCCTGTGAGATATGTAAACATAAGTTTGCACATAAGACCAGTCTCACGTTGCACATGAGATGGCATACTGGTCAGAAGCCGTACGGCTGCGCGACGTGCGGCAAGAGCTTCAGCCAGAAGGGCAACCTGTCGGAGCACGAGCGCATCCACACGGGCGAGAAGCCCTTCGCGTGCGCGCTGTGTCCGCGCCGCTTCACCACGTCCAGCCAGCACCGCCTGCACGCGCGGCGCCACGCCATGGACCGGCCCTACGCCTGCACGCACTGCCCCAAGAGGTTCGTGTCGCGCGGCTCGTGGGCGGCGCACATGCGGCGCGAGGCGGCTGGCGGGGCGGGCGGGGCGGCTGGCGGGGCGGGCGGGGCGGCTGGCGGGGCGGGTGGGGCGGCTGGCGGCGGCGCGGCGCACCGCTGCTCGTGGTGCGGGCGCGGGTTCGCGGAGCGCTGGGCGCTGCTGAAGCACACGCGCACGCACTCGGGCGAGCGCCCCTTCCGCTGCCCGCACTGCCCGCGCGCCTTCGCCGACTGCTCCAACCTCAACAAGCACAAGAAGCAAGTCCACAAGCAGATCAGTTTACTCGCCAACCCACAGCCTCAACCCCAGCAGCCTCCACAAACAGTGTCTGTCCCGAACAGTTCGCCTATTGACGTCAAATTCCAGAGCCAGGAAGACTCCCTCGAAGAAAGAGTCATTTATGTGACCTATGACGTTGACGAAGCTGACTCCCCAGCATTCCATATACTCTCACCCGAACAGACTGTTGACCTTGATGAAACTAAAGTGATGACAACATGCGAGTTGTACTCGGGCCCATCACTGCTCGTTCCACAACCAAAACTGGAACAACTGGAGCTGGAGCCGACTCCTTTGGAAGAAGAAGAGATGGAGCAGCTGCAGGAACCACTTGTGTTAGAAGGACATGAACATATGCCTGTGACGGATGAACAAGGAAATCCACTCCATTTCACAATGCAAGATGGCACAAGACTCGCTATCACATCTGCTGATGGGAAGTCTTTACAGGTAATCACACAAGATGGCCAGACGATTCCTGTTGAAATTAATGGATATGCTGATGAAGAGGAAGTGGACAACCCCGACACGATAGTGCATCAGTTGAATCTGCAGAAGAGCGTGGACAACAACGTGTCATCACCTGTCACTTATTTCACTATCGTTTAA
- Protein Sequence
- MEVYLYNSTVCRLCGEENDNGTLLYSSEENRPNLSEVINTYLPLKVFDDGQLPRTICPGCAIQLEATVEFLTLIINGQKVIRQLHLREREYKKTILNPTPEQDVITEKIVYEVNTSNGVYQVEHPIALQVAGLDKPKRKRGRPPKKVKTPEELAEEAAATAKELNSVRVSDKEEEPTGKRRRKTPTRFREAVQGKELERIFKEEGVTDGEESDREMKPSLDIEVKVPVSKEPEIIGHMENSGEVVVFVKGKGRGRPKGPMRLTRKECAICGMEFSCAGRYMSHVAHHGPVIYQCGQCNKTFDTRLNFTNHQKELEHVGQNVIPIGKKNTKNIQNISEMINMETQAANIQAITETPDVAVNMLVDNVMTALPDLGTQPDNEAEQMLTDNLTTEITSSPTVEGAVKIMDTSPDVVEVTEKSDEVEHVEIVPAGKVRLKCPHCEKTFSNKQSKSLHIKAAHVGERPYVCGECGARFAYPRSLALHAVSHRRQRPRGTRGHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRVRLRPLREGKPHPSYVLPTSHPLSTHYPLAAAARRVAPPPAPARDPRPQLHAVSHRRQRPRGTRGYACDLCGKVLNHPSSVVYHKEAEHAGQRYVCNKCGKSFKHKQLLQRHQLVHSQVRPYTCKTCEASFKTKRNLLNHQLLHTGIKKFSCEICKHKFAHKTSLTLHMRWHTGQKPYGCATCGKSFSQKGNLSEHERIHTGEKPFACALCPRRFTTSSQHRLHARRHAMDRPYACTHCPKRFVSRGSWAAHMRREAAGGAGGAAGGAGGAAGGAGGAAGGGAAHRCSWCGRGFAERWALLKHTRTHSGERPFRCPHCPRAFADCSNLNKHKKQVHKQISLLANPQPQPQQPPQTVSVPNSSPIDVKFQSQEDSLEERVIYVTYDVDEADSPAFHILSPEQTVDLDETKVMTTCELYSGPSLLVPQPKLEQLELEPTPLEEEEMEQLQEPLVLEGHEHMPVTDEQGNPLHFTMQDGTRLAITSADGKSLQVITQDGQTIPVEINGYADEEEVDNPDTIVHQLNLQKSVDNNVSSPVTYFTIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -