Basic Information

Insect: Diaphora mendica
Gene Symbol: -
Assembly: GCA_949125395.1
Location: OX421310.1:14094075-14112308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.75 1e+02 5.1 0.1 1 23 110 132 110 132 0.95

2 29 0.00033 0.044 15.7 0.2 1 23 148 170 148 170 0.97

3 29 2e-05 0.0027 19.5 3.4 1 23 176 198 176 198 0.98

4 29 0.0039 0.52 12.3 2.7 4 23 204 223 204 223 0.96

5 29 0.0039 0.52 12.3 2.7 4 23 229 248 229 248 0.96

6 29 0.0039 0.52 12.3 2.7 4 23 254 273 254 273 0.96

7 29 0.0039 0.52 12.3 2.7 4 23 279 298 279 298 0.96

8 29 0.0039 0.52 12.3 2.7 4 23 304 323 304 323 0.96

9 29 0.0039 0.52 12.3 2.7 4 23 329 348 329 348 0.96

10 29 0.0039 0.52 12.3 2.7 4 23 354 373 354 373 0.96

11 29 0.0039 0.52 12.3 2.7 4 23 379 398 379 398 0.96

12 29 0.0039 0.52 12.3 2.7 4 23 404 423 404 423 0.96

13 29 0.0039 0.52 12.3 2.7 4 23 429 448 429 448 0.96

14 29 0.0039 0.52 12.3 2.7 4 23 454 473 454 473 0.96

15 29 0.0039 0.52 12.3 2.7 4 23 479 498 479 498 0.96

16 29 0.0039 0.52 12.3 2.7 4 23 504 523 504 523 0.96

17 29 0.0039 0.52 12.3 2.7 4 23 529 548 529 548 0.96

18 29 0.0039 0.52 12.3 2.7 4 23 554 573 554 573 0.96

19 29 0.55 75 5.5 0.1 8 23 640 655 639 655 0.93

20 29 0.0039 0.52 12.3 2.7 4 23 661 680 661 680 0.96

21 29 0.0042 0.57 12.2 2.8 4 23 686 705 686 705 0.96

22 29 0.00094 0.13 14.2 4.6 1 23 712 734 712 734 0.98

23 29 5.1e-06 0.00069 21.4 0.4 1 23 740 762 740 762 0.93

24 29 5.3e-06 0.00071 21.3 0.2 1 23 768 790 768 790 0.97

25 29 4.6e-05 0.0063 18.3 1.6 3 23 798 819 796 819 0.96

26 29 0.00019 0.026 16.4 2.8 1 23 825 848 825 848 0.95

27 29 3.8e-06 0.00052 21.7 0.8 2 23 855 876 854 876 0.97

28 29 0.00018 0.024 16.5 0.4 3 23 884 904 882 904 0.96

29 29 0.014 1.9 10.5 0.1 1 23 910 934 910 934 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.75	1e+02	5.1	0.1	1	23	110	132	110	132	0.95
2	29	0.00033	0.044	15.7	0.2	1	23	148	170	148	170	0.97
3	29	2e-05	0.0027	19.5	3.4	1	23	176	198	176	198	0.98
4	29	0.0039	0.52	12.3	2.7	4	23	204	223	204	223	0.96
5	29	0.0039	0.52	12.3	2.7	4	23	229	248	229	248	0.96
6	29	0.0039	0.52	12.3	2.7	4	23	254	273	254	273	0.96
7	29	0.0039	0.52	12.3	2.7	4	23	279	298	279	298	0.96
8	29	0.0039	0.52	12.3	2.7	4	23	304	323	304	323	0.96
9	29	0.0039	0.52	12.3	2.7	4	23	329	348	329	348	0.96
10	29	0.0039	0.52	12.3	2.7	4	23	354	373	354	373	0.96
11	29	0.0039	0.52	12.3	2.7	4	23	379	398	379	398	0.96
12	29	0.0039	0.52	12.3	2.7	4	23	404	423	404	423	0.96
13	29	0.0039	0.52	12.3	2.7	4	23	429	448	429	448	0.96
14	29	0.0039	0.52	12.3	2.7	4	23	454	473	454	473	0.96
15	29	0.0039	0.52	12.3	2.7	4	23	479	498	479	498	0.96
16	29	0.0039	0.52	12.3	2.7	4	23	504	523	504	523	0.96
17	29	0.0039	0.52	12.3	2.7	4	23	529	548	529	548	0.96
18	29	0.0039	0.52	12.3	2.7	4	23	554	573	554	573	0.96
19	29	0.55	75	5.5	0.1	8	23	640	655	639	655	0.93
20	29	0.0039	0.52	12.3	2.7	4	23	661	680	661	680	0.96
21	29	0.0042	0.57	12.2	2.8	4	23	686	705	686	705	0.96
22	29	0.00094	0.13	14.2	4.6	1	23	712	734	712	734	0.98
23	29	5.1e-06	0.00069	21.4	0.4	1	23	740	762	740	762	0.93
24	29	5.3e-06	0.00071	21.3	0.2	1	23	768	790	768	790	0.97
25	29	4.6e-05	0.0063	18.3	1.6	3	23	798	819	796	819	0.96
26	29	0.00019	0.026	16.4	2.8	1	23	825	848	825	848	0.95
27	29	3.8e-06	0.00052	21.7	0.8	2	23	855	876	854	876	0.97
28	29	0.00018	0.024	16.5	0.4	3	23	884	904	882	904	0.96
29	29	0.014	1.9	10.5	0.1	1	23	910	934	910	934	0.94

Sequence Information

Coding Sequence: ATGCAGATTACTGGAGATTCGAATGATGAGACAGCCATAGAACTCCAGATGGCAGGAGATGAAGAGACTGCCAATGCTATCATAGCTGCTGCTCAGGAACAAGGCGGAGCGCTGATCAAGGTGGAGGGCGGCGAAATGTACCGCGTGCACAGCGTGGAGCCCCGGCCTCCGCCCCACCAGCAATCCTATCTCCAGCTCGTCACTAGGCATGGAGACGGCTTCCAGTGCCTGCTCTGCCTGGCCAAGAACGAAGGTGAGAAGCCTCAGGTGTGCGGTTCCGCGGAGTCGATGATGCGTCACCTGAAGCGGTTCCACGACGCGCGGGTGTACATCTGCCAGTTCTGCTCCGCCATCATGCGGAGGAAGGTCGACTACACCGCGCATATCGCGGAGCATGCGAGCTCGTTGAAGGGTGGCAATACTGGAGGGGCGGGGTCGCCGCACACGTGCGCGCTGTGCGGCAAGTCGTTCGGCTCCCGCGCGCTGCTGCTGGAGCACGCCAACGTGCACGCCGGCGCCCGTCCGCACGTCTGCCCCACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACTACACCCCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGCCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGGTACGTACACTACACACCTGCCACAAGGCCTTCGTCAACAAGTACACCTACCAGGCGCACGTCAAGACGCACGCGATTCGTCCCCGTCCACACAAATGTAATCAATGTGGCAAAGCATTCTTGACGCCCCAACATCTTTTCCAACATGAAAAAACTCATTCAGGGATTAAGGATTTCATCTGTAATATATGTAACAAGGCGTTCAGTACGCAGCACAACCTGGAGGTACACGGCGTGGTCCACTCGGGCAACAAGGCCTTCGCCTGCAGCGTCTGCTCTAAGGCCTTCGCGCGCAGGGCAGAGCTTCGCGACCACGTGCGGACGCACACCGGCGAGCGTCCGTTTGGGTGCGATATCTGCGGCGCACGCTTCACGCAGCGCTCCAACCTGCACTCGCACCGACGAGCCACGCACATGGACGACAAACGGCACTCCTGCACGCTCTGCCCCAAGAGATTCAAGCGGAGGAGATTGTTGGAGTACCACATAAAGGCGTCTCACACGGGCGAACGGCCCCTCAAGTGCAAAGTTTGTGGCGCGTCCTTTGTATACCCCGAACATTACAAGAAACACATCCGAATACACAGTGGGGATAGACCCTACGGTTGTGAGATCTGCGGCAAGTCGTTCAACTCGGCGGATAACCGCAACACGCACCGGTTCGTGCACAGCGACAAGAAGCCCTACGAGTGCGTGTCGTGCGGCGCCGGCTACATGCGCAAGCAGCTGCTCTACGCGCACATGAACACCAGCGGTCACTTAGCGGAATCAATAGTGGTCAACCAACCGAGAGTCATCAAAGTCTCAGAAAATatatTTGAAGGGAGCGAATTAGATACCAGTGTCAAATCAGTCAGTTTTGttAAAACAGAAAATTTCGAGGACACAAAATTAATTTGCAACATAATACCAGACGATAAGAAACTAATATTACAAGATTctGATAAAACGACATTAAGTCTACTTCAAGAGAATGAAGACCCAACACTACTGACAATACATAACCTGAGTGATAGAAGTCAGAACGCAATTCTGGAAGCTGTCAGCGCTGAACAATTGTCAGATCAAGCTGAGATCGTAGCCAACGATGAGAACGGCGGATTAGTGAGACTGATACAAATTAAGCTACCAGACGGGAATAACGGATGGGTGGCACTTAATCGCTGA
Protein Sequence: MQITGDSNDETAIELQMAGDEETANAIIAAAQEQGGALIKVEGGEMYRVHSVEPRPPPHQQSYLQLVTRHGDGFQCLLCLAKNEGEKPQVCGSAESMMRHLKRFHDARVYICQFCSAIMRRKVDYTAHIAEHASSLKGGNTGGAGSPHTCALCGKSFGSRALLLEHANVHAGARPHVCPTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTTPLPQGLRQQVHLPGARQDARGTYTTHLPQGLRQQVHLPGARQDARGTYTTHLPQGLRQQAFANKYTYQAHVKTHAVRTLHTCHKAFANKYTYQAHVKTHAVRTLHTCHKAFVNKYTYQAHVKTHAIRPRPHKCNQCGKAFLTPQHLFQHEKTHSGIKDFICNICNKAFSTQHNLEVHGVVHSGNKAFACSVCSKAFARRAELRDHVRTHTGERPFGCDICGARFTQRSNLHSHRRATHMDDKRHSCTLCPKRFKRRRLLEYHIKASHTGERPLKCKVCGASFVYPEHYKKHIRIHSGDRPYGCEICGKSFNSADNRNTHRFVHSDKKPYECVSCGAGYMRKQLLYAHMNTSGHLAESIVVNQPRVIKVSENIFEGSELDTSVKSVSFVKTENFEDTKLICNIIPDDKKLILQDSDKTTLSLLQENEDPTLLTIHNLSDRSQNAILEAVSAEQLSDQAEIVANDENGGLVRLIQIKLPDGNNGWVALNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -