Dmen045186.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diaphora mendica
Gene Symbol
clz9
Assembly
GCA_949125395.1
Location
OX421335.1:10733794-10736415[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-08 8.9e-05 23.6 0.0 2 41 26 66 25 67 0.93

Sequence Information

Coding Sequence
ATGAATACTACCAAGCCTAAAAGCACAAGGAAAAAAAGAAGAGTAGTAGGATCGAGAACTTATAGAGACTATTCCGAAGAAATGTTGGAATTAGCCATTGacatggtaaaaaaaaatatcatgtcAAGTCGGGAGGCAGAAAAGAGGTTTGGGATCCCTCGACGGACAATATTAAAtaaggttaaaaaaatacacatgaaGCCGGCTGGGGGGCAAAAGAAACTCACTAACGAAGAGGAAGAAAAACTGGCAAACGTTTTGATAGCTTCAGCAGATTACGGCAGCCCCATGTCGAAAATGGACGtaaaaatattagtttataaatatgttgAAAAAAATTCACGAACTGATTTATTCGATGGCAAATTGCCCAGTGATACGTGGGTGGATGGGTTTTTAAACAGACATCGTTCAAAATTGACCATCAGAACgacacaaaatataaaaaaagtccgAGCTGAGAAAGGATTAGAAGAAATTGAACAATTCTTTGTCAATTTAAGTGAAACTTTAAAGGATATACCACCAACCAACATATTGAACTACGACGAGACTAACTTGTCAGACAATCCAGGCACTTCAAAGTGTGTTTTTAGAAGGGGTGTAAAACATCCTGAAAGGATTCTAAATAGCACAAAAAGTTGCATTTCTCTCATGTTTACTTGCAGCGCAGCTGGGACGTGCCTACCAACATATGTGGTTTATAAATCCACTAATTTATATTCTGAGTGGGTTGAAGGAGGTCCAGATGGAACAAGATATAATTGCTCTAAATCCGGTTGGTTTGATAGTGCTTCTTTCGAAGATTATTTCAAAACCATAGTGGTTGAGTGGGCAAAACAAATTCCCGGGCCAAAAGTAGTCATTGGGGACAATTTGTCTTCCCATATAAACGTTGAAGTTGTGGAGTTGTGTCAAAAACATAACGTAAGACTGGTATTTTTGCCACCTAACTCCACTCATTTAATGCAACCACTAGACGTAGCGTACTTTGGCCCACTAAAAAGAGAATGGAAAAAGATTCTGTTGGATTATAAATTGAAGAACCCAGGACAAACTACCTTGAATAAAAAACACTTTCCCAAACTTTTGGCTCAATTGCTAGAAAATATGAAATacaaggaaaaaaataatataagaagTGGCTTTAGAGCCACAGGTATATGGCCAGTAAATCCACGAAACGTTTTTAAGAGAATTCCTGAATATTTGGACGATACTGAATATGGGATAGATACTACATTGCTAGAATATCTCAAAGAAACAAGGGCTCCTAAGCCAATGCAAGTAAAAAGAAGCAAAAAACTACGCACAGAACCTGGAAAGTCAGTATGTGTTACCGATATCTTGACAAAAGCTAATAGTCCACAAACAACTCGAAAGAAGAGAGctgtaaaaaatgttactgTGGATAAAATAAGAGACACAAACCAAGAAAAAGAAGAGATTTTAGCGTTGGAAATAGAAAATGAGATATACATATTAGATGAAATTACAGGTGAAgtgataaaaagaaaagaaactgCTGAAAAGGTTGAATACGATATGCCGTCGAGCTCAACTAGAATCATCAGTTGCAGAAAACCAGCACCAGTGCCACAGTTATCACCGATGATCTATAATCCAGGCAGACTTGACGTACTATGTATCAAATTTATCAACATGCATTTATGTTTACCAGCGCAGGATACTACAGTTCAACCATCAGACGTatgtgtattaaataaaaatttgaaaaatgataATCAGAATCAGTCTTTCATAGCTACCAATGAAAATTATTTGCCAATATGTTTACGACCAAAGCCAAATAGTTCGTCTAAATCGAAAGTGATAATAACTTCAGATGTGAAAGTAACCTCAAAGGAAATAAATGAcatcaagaaaaaaataaaagtagaccCTGGAGTTATAACACAATCAGCATTACAAATGAAAATAGTAACAAGAAAAGTTGACAAAGATAGTGAACATAAAAGTACGCAAGAGAAATATACATGTCCTAATGAAAACATGAAAACGTCACGtgaaacaaataaaagaaaaaggcaAGTTAAGCCTGAGAGTAAAAAACCTTgtgaaaaaaagataaaaacagaaaaaataaataaaaaaagagttgtGAAACTCAAGAAATTGAGATCATATTGTGAAACAAGCTCTGAAAATTCGGATATTCAGAGTCTCTTAGATACAGATCATTCTGAATATGAGACATTTGATGAATATATAGAAACATGTTTAAAAGAAATagataataaggaaaacttGGAGCCAGATAATATTACTGTACCATTTGGGCTCAGTCATATCAGCTATTTTATTAGTGATGTAGGTTTAAATGAAGATGACTGGGttattgtgaaatttgcaacaaaaaaaagtataaagcaCTTTGTTGGCCGTGttgtatacataaaaaactgCATTCCCACTGTAAAATTTGcaagaaaagttaaaaattCAAAAGATGGTAAAGTAGTCTTCTCGTACCCGAATGTCGAGGACGTGTGTGAAGTAAATCGTGATGATGTGGAAATAGTATTGCCTAAACCTAATATTTCTAGACGAGGCCAAATAATGTTTGATATTACCTTTAATCCTTCCtacaacatacaataa
Protein Sequence
MNTTKPKSTRKKRRVVGSRTYRDYSEEMLELAIDMVKKNIMSSREAEKRFGIPRRTILNKVKKIHMKPAGGQKKLTNEEEEKLANVLIASADYGSPMSKMDVKILVYKYVEKNSRTDLFDGKLPSDTWVDGFLNRHRSKLTIRTTQNIKKVRAEKGLEEIEQFFVNLSETLKDIPPTNILNYDETNLSDNPGTSKCVFRRGVKHPERILNSTKSCISLMFTCSAAGTCLPTYVVYKSTNLYSEWVEGGPDGTRYNCSKSGWFDSASFEDYFKTIVVEWAKQIPGPKVVIGDNLSSHINVEVVELCQKHNVRLVFLPPNSTHLMQPLDVAYFGPLKREWKKILLDYKLKNPGQTTLNKKHFPKLLAQLLENMKYKEKNNIRSGFRATGIWPVNPRNVFKRIPEYLDDTEYGIDTTLLEYLKETRAPKPMQVKRSKKLRTEPGKSVCVTDILTKANSPQTTRKKRAVKNVTVDKIRDTNQEKEEILALEIENEIYILDEITGEVIKRKETAEKVEYDMPSSSTRIISCRKPAPVPQLSPMIYNPGRLDVLCIKFINMHLCLPAQDTTVQPSDVCVLNKNLKNDNQNQSFIATNENYLPICLRPKPNSSSKSKVIITSDVKVTSKEINDIKKKIKVDPGVITQSALQMKIVTRKVDKDSEHKSTQEKYTCPNENMKTSRETNKRKRQVKPESKKPCEKKIKTEKINKKRVVKLKKLRSYCETSSENSDIQSLLDTDHSEYETFDEYIETCLKEIDNKENLEPDNITVPFGLSHISYFISDVGLNEDDWVIVKFATKKSIKHFVGRVVYIKNCIPTVKFARKVKNSKDGKVVFSYPNVEDVCEVNRDDVEIVLPKPNISRRGQIMFDITFNPSYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00441439; iTF_00744578;
90% Identity
iTF_00441439;
80% Identity
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