Dmen028366.1
Basic Information
- Insect
- Diaphora mendica
- Gene Symbol
- -
- Assembly
- GCA_949125395.1
- Location
- OX421323.1:5863861-5864259[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-10 4.4e-07 30.9 0.0 5 39 7 41 3 43 0.89
Sequence Information
- Coding Sequence
- ATGTTACGAGATCAGCTAATAGAAAAGGCTATAAAAGCAATAAACAAAGGGATGACACTGAGATTAGCAGCCTTAACCTATAACATACCAAGAACAACTCTGATATATAGAGTAAAACAAGGACTTTCGGGTCCTCAAACGCTGTTGACCACTGAAGAAGAAACTGAATTGGCAAATTGGATACAATTCTGTACCAGTGACGGTTGTTATTGGAGTAAAAAAGATATGATTACTAATATTGGCGAGTAtttaagaaacaaaaataaGGGTAATCTATTCAAAGATGGGGTGCCAGGCGAGAGGTGGtaccatttgtttttaaaacgaCATCCAGAGTTGAAGAAGTGTATGATTATAAGGAAGGAATACGAGCGAAAGTCTAATAAGAATTTGCTATGA
- Protein Sequence
- MLRDQLIEKAIKAINKGMTLRLAALTYNIPRTTLIYRVKQGLSGPQTLLTTEEETELANWIQFCTSDGCYWSKKDMITNIGEYLRNKNKGNLFKDGVPGERWYHLFLKRHPELKKCMIIRKEYERKSNKNLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00822881; iTF_00706884; iTF_00157149;
- 90% Identity
- iTF_00822881; iTF_00706884; iTF_00157149;
- 80% Identity
- -