Dfer015477.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- nfxl1
- Assembly
- GCA_027564275.1
- Location
- JANSTW010051404.1:1-4123[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.43 7e+03 -2.0 1.3 14 19 87 92 87 92 0.84 2 13 0.15 2.4e+03 -0.5 0.3 4 10 123 129 122 129 0.92 3 13 3e-08 0.00048 20.9 16.9 1 19 137 154 137 154 0.99 4 13 0.00019 3 8.8 11.8 1 18 190 208 190 209 0.97 5 13 0.9 1.4e+04 -3.0 1.0 6 10 234 238 233 238 0.88 6 13 3.1e-08 0.0005 20.8 12.2 1 18 244 261 244 262 0.98 7 13 0.18 2.9e+03 -0.8 1.0 13 18 285 291 285 294 0.60 8 13 5e-05 0.8 10.6 9.1 3 18 299 314 297 315 0.90 9 13 0.017 2.8e+02 2.5 2.6 1 12 324 335 324 335 0.96 10 13 2 3.2e+04 -4.3 1.2 5 10 338 343 338 344 0.79 11 13 2.2e-05 0.35 11.7 13.5 1 18 349 366 349 367 0.94 12 13 6.1e-09 9.9e-05 23.1 15.3 1 19 376 394 376 394 0.97 13 13 1.1 1.7e+04 -3.2 1.1 5 10 422 427 422 427 0.83
Sequence Information
- Coding Sequence
- ATGTTAAGACCCAAATCTACAGTTTCGAAAATACATAAGTACAAGCAAATAAAAAAAAATATAATTTATTACTTCGTGTATCAAGCTACGGGAGTAATATGGTCCTGCGAGGATTGCTACAGTTTCTTTCACTTGCCTTGCGTTCAACGATGGGGCAACGACAGCACATCTTTAATGAAAATGCACCAAGACGCTGAGGTCGGCTATTACAATAACCAGGGTGAATATGTGGCCAAAGTAAAGAAAACTATAAAATGGAATTGCCCGAAATGTAGGAAAGATTATTTACGTGATGAAATTCCACGAAATTATACATGTTTTTGTAAAAAAGAAAACAATCCCGAAAATCATCCATGGCTTGTGCCCCATTCTTGTGGTGAAATGTGTCGGAAATTGTTGAAGCCAGACTGTGGACACCGATGTGTCTTGTTATGCCATCCCGGTCCTTGTCCACCGTGCCCACAAATGGTGTCTGCAACATGTGCATGCGGACAATCCAATCCAAGAATGATGCGTTGTTCGCAGAAAATTTGGAAATGTTTAAATAAATGTAGATTAGTCCTGAAATGTGGAATTCATGTTTGTGGACTACCTTGTCATGACAGAAATCAATGTCCGCCTTGCATTAAAAAAAGTAAACAAAGTTGTTTGTGTGGCCACAGCACACAGGAACGTAATTGCACCGAGTCGATTTGGCAATGTAACAAGATTTGTAACAAAATGTTCCCGTGCGGATTACACAGATGTGAAATTAAATGTCACGAAGGTGAATGTGGAGAATGTGCTCTGGGCCTGCCCAGAGAGTGTCCTTGTGGAAAAGAGAAAACCCAAGCCCCTTGTTCGGAAGAAATCGGACCCTGCGGTAATACATGTCAGAAATTGCTCACTTGTGAATTGCATATTTGTGTTGAAAGGTGTCACAAGGGCAATTGTAGTCAGTGTCTTGAAATAATCAAAAAGGATTGTCGCTGTGGCACCCACTCCAAAGAGCTGCCATGCCACAAAACGTTCACGTGTGACACAAAATGTAAACAAATGAGAGATTGTAACAAGCATGCTTGCAATAGAAAGTGTTGCGACGGACAATGTCCAGCATGCGATAAAATTTGCGGAAAGACTTTGTCTTGTGGCAAACATAAATGTTCGTCTCTCTGTCATCATGGACAATGTTATCCGTGTACTTTGAAAATGCCAGTGAAATGCCGTTGCGGCGGAACAAGTATAAACGTTCCATGTGGCAGGGAAAAGAAAACTAAACCGCCAAAGTGTTTGAAACCTTGCAA
- Protein Sequence
- MLRPKSTVSKIHKYKQIKKNIIYYFVYQATGVIWSCEDCYSFFHLPCVQRWGNDSTSLMKMHQDAEVGYYNNQGEYVAKVKKTIKWNCPKCRKDYLRDEIPRNYTCFCKKENNPENHPWLVPHSCGEMCRKLLKPDCGHRCVLLCHPGPCPPCPQMVSATCACGQSNPRMMRCSQKIWKCLNKCRLVLKCGIHVCGLPCHDRNQCPPCIKKSKQSCLCGHSTQERNCTESIWQCNKICNKMFPCGLHRCEIKCHEGECGECALGLPRECPCGKEKTQAPCSEEIGPCGNTCQKLLTCELHICVERCHKGNCSQCLEIIKKDCRCGTHSKELPCHKTFTCDTKCKQMRDCNKHACNRKCCDGQCPACDKICGKTLSCGKHKCSSLCHHGQCYPCTLKMPVKCRCGGTSINVPCGREKKTKPPKCLKPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -