Dfer001596.2
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- ZNF131
- Assembly
- GCA_027564275.1
- Location
- JANSTW010060224.1:1-3130[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0054 0.33 12.3 1.1 1 23 168 191 168 191 0.95 2 12 0.026 1.6 10.2 2.0 2 23 199 222 198 222 0.94 3 12 0.32 20 6.7 0.6 1 23 243 266 243 266 0.92 4 12 0.0087 0.54 11.6 0.8 2 23 274 297 273 297 0.95 5 12 6.6e-05 0.004 18.3 4.7 1 23 315 337 315 337 0.97 6 12 0.016 0.99 10.8 1.2 2 23 351 372 350 372 0.91 7 12 0.16 10 7.6 2.7 1 23 380 403 380 403 0.98 8 12 0.015 0.93 10.9 0.4 3 23 420 440 419 440 0.97 9 12 0.0083 0.51 11.7 4.2 1 21 446 466 446 469 0.95 10 12 3.4e-06 0.00021 22.4 1.8 1 23 476 498 476 498 0.94 11 12 0.0061 0.37 12.1 0.3 1 23 504 527 504 527 0.95 12 12 1.4 84 4.7 0.6 1 10 533 542 533 543 0.93
Sequence Information
- Coding Sequence
- ATGAACAAATTGTACAATATGCAATCACAGCCTCTCATAAAGGTAGTCGATCAAAATCCTCAACAAAAATGTGCTGAAATTTATCGGGACTCAATGTCCGGGACTTATTGTTTTATTTGCTTTAATTGCGGTGGATTGTTTAAGGAATTTGTGGAGATATACAAACACATCGAAGATGAACATTACAAAGGTAACAAACAATATGATGCAGTTAACGCAAATAATCCAAAAGTTATTACAGAATTTTCAGAACAAATACAAAATACAGAATTTATTGAAGTGGCCAGCTCTGAATCCATGACCGATCTGGTTGAAGTTAAAAAAGAATTAGAAGATAATGGACAACAAGAAGATACATTGCAAACAATTAAATGCGAAGCAAACGTAGAAATTAATGAAACAAATCAAAGTTGCAGTAATTCAACAATAATGTGCGACGAGGATTCAATGGCAGCTGATGAAATCAACAATGAGTCCAATTGTAGTAATGAAAAGATGTCATATTCTTGTGACTTTTGTAAACAAGCATTTGCTAAGAAGTCGCAAGTTTTGATACATTACACATCAAGCCACCCAAATATATTAAAAGATCTGAAATGTAAACTTTGCTCTTATGTTGCCTTTAATAAAAAACGGTACTTAAGGCAACACATTAGGACGTACCATCAAAAGGGGGATGAAACAATTAGTGATGAGACTGAAAAAGATCTGCTTAAGGAAAAAACATACTCCTGTGACTTTTGTAAAGAGATTTTTCCTAAAATGTCTTTGGTTTTGGAACATTTTAAGCTAAGTCATCCGAATAAACTAGAAGATCTTAAATGTAAATATTGTCCATACATGGCCTATAATAAACGTCGTAATTTAACACAACATATTCGATTAGCACACCCATTGAAATCGATAAGCAAGGGAAAAGATTACAAGCGTAAAGCACAAAACTTTTTTTGTGCCAAATGTAACAAATGTTATACTAGGAAGTCAACTCTTCTAACGCATATACTAAGCCACCTGGAAGTACATTCTGAAGTTAAAAAAGACCAAGAATTTATTTGTATATTCTGTAAACAAAGTTTTGCAGAAAAATCACAGCTGTTGGAACATTTTAAGACCCATCCCGACAATCTCTTGGAAGATTATAAATGCAAATTTTGCCCTTTCATCGTTCATATAAAACGTCAACTACGATCGCATGTTCGGATTTACCATCCAGAAGAATATGTAGCAAGACGAAAGTATTTTGATGAACCGAAAGCGTGTGACGTTTGTGGCAAAATATTTCATTATGTTCCACACTACGACCAACATATGGCCATACATTTAGATTTGAAATTGCacaaatgtgacgtatgcgataaaggctttaatttaaaacgtgatttatttatccactatagatgcatgcatacagatagaaaaagtacacatatttgtcccatatgtcagcgtacatttaagaactccactaatttacgcagacataatattgtgcatactggggagaaaccgttcaaatgtgacctctgtccccagaggtttaCTGTTCAATTGACCGCAATCCGACACCAAAAAGCAGTTCATAACAATGAAAGATCTTATCAATGCTACATTTGTGGATTAAAATTTGTGTGCAATG
- Protein Sequence
- MNKLYNMQSQPLIKVVDQNPQQKCAEIYRDSMSGTYCFICFNCGGLFKEFVEIYKHIEDEHYKGNKQYDAVNANNPKVITEFSEQIQNTEFIEVASSESMTDLVEVKKELEDNGQQEDTLQTIKCEANVEINETNQSCSNSTIMCDEDSMAADEINNESNCSNEKMSYSCDFCKQAFAKKSQVLIHYTSSHPNILKDLKCKLCSYVAFNKKRYLRQHIRTYHQKGDETISDETEKDLLKEKTYSCDFCKEIFPKMSLVLEHFKLSHPNKLEDLKCKYCPYMAYNKRRNLTQHIRLAHPLKSISKGKDYKRKAQNFFCAKCNKCYTRKSTLLTHILSHLEVHSEVKKDQEFICIFCKQSFAEKSQLLEHFKTHPDNLLEDYKCKFCPFIVHIKRQLRSHVRIYHPEEYVARRKYFDEPKACDVCGKIFHYVPHYDQHMAIHLDLKLHKCDVCDKGFNLKRDLFIHYRCMHTDRKSTHICPICQRTFKNSTNLRRHNIVHTGEKPFKCDLCPQRFTVQLTAIRHQKAVHNNERSYQCYICGLKFVCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -