Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: Rreb1
Assembly: GCA_027564275.1
Location: JANSTW010030672.1:6070-12151[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00016 0.01 17.1 0.8 1 23 170 192 170 192 0.98

2 13 0.00064 0.039 15.2 0.2 1 23 206 228 206 228 0.98

3 13 0.00011 0.0067 17.6 7.4 1 23 234 256 234 256 0.99

4 13 0.15 9.4 7.7 4.7 2 23 374 396 374 397 0.93

5 13 1.2 77 4.9 0.2 1 21 440 460 440 461 0.80

6 13 0.017 1 10.7 0.1 1 23 609 631 609 631 0.97

7 13 0.00051 0.031 15.5 2.5 1 23 640 662 640 662 0.98

8 13 0.00058 0.036 15.4 2.1 1 23 668 691 668 691 0.97

9 13 0.0017 0.11 13.9 2.1 1 23 1044 1067 1044 1067 0.95

10 13 0.00066 0.04 15.2 0.3 2 23 1401 1422 1400 1422 0.97

11 13 0.26 16 7.0 6.3 1 23 1428 1451 1428 1451 0.97

12 13 0.022 1.3 10.4 0.6 3 23 1594 1614 1592 1614 0.95

13 13 0.083 5.1 8.6 5.2 1 23 1620 1642 1620 1642 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00016	0.01	17.1	0.8	1	23	170	192	170	192	0.98
2	13	0.00064	0.039	15.2	0.2	1	23	206	228	206	228	0.98
3	13	0.00011	0.0067	17.6	7.4	1	23	234	256	234	256	0.99
4	13	0.15	9.4	7.7	4.7	2	23	374	396	374	397	0.93
5	13	1.2	77	4.9	0.2	1	21	440	460	440	461	0.80
6	13	0.017	1	10.7	0.1	1	23	609	631	609	631	0.97
7	13	0.00051	0.031	15.5	2.5	1	23	640	662	640	662	0.98
8	13	0.00058	0.036	15.4	2.1	1	23	668	691	668	691	0.97
9	13	0.0017	0.11	13.9	2.1	1	23	1044	1067	1044	1067	0.95
10	13	0.00066	0.04	15.2	0.3	2	23	1401	1422	1400	1422	0.97
11	13	0.26	16	7.0	6.3	1	23	1428	1451	1428	1451	0.97
12	13	0.022	1.3	10.4	0.6	3	23	1594	1614	1592	1614	0.95
13	13	0.083	5.1	8.6	5.2	1	23	1620	1642	1620	1642	0.99

Sequence Information

Coding Sequence: ATGGAACGGCGAGCTTCAACAAACTCCGAATCGTCCATCGAACCGATGGACATCAGTACAAAGACAACCAGCAGCACAGATCCAAATTCATCGTTGGCACTGAAGAGTAGCGATCCAAATGATTCGGACAATTTTGAATCGGATCGAGACGATGAATATGCTAAACAGCCGCAACATACAAATTTCGTGAGGCGTGAAAATCCGCGCAACTACGAAAACAATTTACTAATAATGAGAAAGAAATTTCGCTTAAATATGCCAAATAATCGAAATCTAAATAATAACAATAACAATAATAATAATTTGCAATTTAATTACGATAAAATTGAGAACTTAACCCGACTTCACGAACAACAGCGATTGATGCCAACAACACAAAATATTGACAAAATCGGTCAGGATGGACATCGAAGCGCGGATTCAAATGAAAATTTAAATGTTTCATCAAGTCCGGAGATGACAAACTATAACCAACAGAATCGTTCAAATAACCTAACTGACCTGCGATATAATTGTCCTATTTGTGGTAAACTGTCTGTAACACAGCACGAATTTACCGAACACATTCGCAGTCATAATAACAGTAATAATATCTCGTCAGATGATTCGCAGCATTTTACGTGTCAGATATGTTTTAAGGTTCTATCTTCGGCTTCGTCATTGGACCGTCACGTGCTTGTCCATACCGGTGAACGTCCATTTACGTGTAAATTTTGTCACGTAACATTTACAACTAATGGCAATATGCATCGACATATGCGGACGCACAAGCAACGGAACGAGGGCGAAAGTTACGAAAGTGATGGATCCACAGACTCGAGTGTCAGCAGTTCAACTAATAATAATAATTTTCATAATCATCACTTGATGGATGGGAAACGGAAAATTATAGATGAGGACAGCGGTGCCAGTATCAAGAGAAGGCTTAAGACAATTAACAATAATAATATTGTCAATAAGCCGTTGTCGATGGTCCAGCAACATCAGCAATCTCTGCAACAGAACTATGCTTCGCCCACGTTACCGCAGTTTTGTTGCCCGGTCTGTGTACGCAGTGATTTTGTGGATATGCTAAGCCTTGAGAATCACATGGACCGTGAACATCCAAGCATACAAGCCAGATGTCGCTATTGTGAAGTGGTTTTCAAAAGTCACAAAGCTTTGAATGCTCATCGTTGTGCCATTCATCACAAGTCTCCACACATTACACAAGGTTTCAAAGATTTAACGTTTGTTGATTTTTCAAGTGAAAAATTTCCATTAATTGCCAAGTCCATGTGTGAACAGACAATGCGAACAGCCATTACAAACCAAAAATTCGAATGCCTTAAATGTGGCAGGGCTTTTCCGTGCGCAAGTGCTGTTGACATTCACATTAAATCGTGTGGCATTCGAGCACCGGATAGTCCACAAGATTTTTCCATTCGTCGACGTTTGACCAGCAATGAAACCACCTCTGACGAAGATGCCAAACGGGATGACTTCTTTGCTCACTTAGATTTAAAGAATAAATCAACGACCCCCGCAATGGATGCATACAATGCTTGCATCACAAATTCAATGAAACTTTACGATAGATCTCAAATGGTTCAGATTAAACAGGAACGTCACACACCCCAACCACCACCGTCCAACTATTCGGATACCAAAGATTTAGCTGATATTCAATCAATTCTAAGCGTAACATCATCTGGCGGATTTTTACGACAACTGGACAAATCATTGCCGCCGGTGATGCCGAAAGAGCTTCCATTTTCACGTGAGGAGGAGGAAGCTCAAGATGCATTTACGGCCGAATTTCGAAAGATGAAATTGCGTGGTGAATTTCCGTGTAAGCTATGTTCGGCTGTCTTTCCAAATTTAAGAGCTCTAAAGGGACACAACCGCATACATTTGAGTGCGGCAGGTTCTGGCCCGTATTGCtgtaacatgtgtccgtattcaatacacgacaaagcagccctaatcagacatatgcgcacacacaatggtgatcggccttatgaatgtggcatttgtaattatgcttttacaacaaaggccaattgtgaaCGGCACTTACGAAATCGCCATGGAAAGACTACACGTGAAGAGGTGAAACGTGCCATCATCTATCATCCATCGGAAGATTCAAGTTGTGATGATCCGGTTAAGAAAATGCAAATCTACAATTCATCATATGATGATGATGAGCACGCAAGCCCTAAGGATCGCTCAACACCAGTGTCACATCTCAAAGAAATGCTTATGCCTGACAAGAGCCTCAAAATTCAAGTAAAAAGTCTAGAACAATTGCAACAACAACAACCCATTTACGATGATGATTTGGACAAGGAACTGGAATGTGATGTTGAGGCGACAAATCGGTGCCCGGTTGATTTAAGCATGGATGCTTTAGATCTGAGTAAGACGAGTAAGTTAGTTGTGGAgaagaaagaagtcgaggaagaagaagatgcagatggagatgaagaagacgatgaagatgatgaggaagaggaagaagTGATGGGTCCAAAAATTGATATGGCCATGTTTGAGAAAAATCAACAGTTACTATTGGCTCAGCAACAATTCTTTAGTGAAACATTTCCGAAAATTGATCCAGCTCACTATTTTCAACTATCTCAACTTTATCGTAATTTAATGTTTCCACCAGCCGGCTTTCCCATACATCCCCTCTTTTTGCAAAATTCCTTTCTTCCGCCCCACTCCAACGAAATGAAAGAACATGCAAAAGAACCTCAGCTAAGACAACCAACACCAAACCAACAGGCATCACCTCAGCCGCCAATGTTTCCCAGTGGTTTAATGATGCCCTCCATGTTTCCAGCCACAAATGGACCGATTCTTCCGCCATTACCACCAAGAAATGTTATGCAAGAAAAACAAATGCAACAACAATCACAATCACCAATGTCACAACCCTTGCCACACAGCCTAAGACAAAGTCCACATAACATGCAGACTATGACACAACAACAGCAACAACACAATCAATTGCCACAACAACCGGCTAAACCGCCGGTGCCAAGCTCGAATCATAGTGCAGGGCCTGTAAAAATGGTTATAAAAAATGGTGTTCTTATGCCAAAGCAAAAACAAAGACGTTACCGAACGGAACGTCCATTTGCATGTGAACACTGTTCGGCACGATTTACACTGCGATCAAATATGGAACGCCACATCAAGCAACAGCATCCACAATATTGGGCTCAACGACAACGCAGTGGTCACAATATTCTGAGACGCGGTAGTGGTGGTGGTGGCAGTAATGCTGCTAACAATTCTCTAAATCAATCTGTTCCTTCGTCATCACCACAACAATCTCTACCACCAAATGTCCAGCAACTTCATCATATGCATCAGCAATCACAACAGTTGCAACAACCGCCGCACCAGAATCTTCCATCTGCTGCCGTACAGAACTCGTTAAGTGCAATCTCTGATCAAGTAAAATATGCAATTCTTGCTCAACAGCTCAAATGTCGAAATGAAAAATCTGATTATTTTGTAAATCCTATTGCTCAAAACCATAATAATATGATTGAACGACAAGCTGCCGCTACAATTCATTTTCAAACAAGTGCAGATGCCGCAGGTCCAATCAAAAACAGTGCACCACAACCACCTGCCGATGACGACGAAGATGATGATTCTGAATTAATAATTGATGAAGATAGTGAACCAGAAGATTTATCAGTTGTTAAAACTCCCGAATTGAATGAAGTCAATGTAGCAGCCAAAAAGGTGGCCGAAAATATTTTGGAACAAGCGATGAGAGTTAATGCTGTGGCTAATCGCTTACAGGCAGCAAAGACTTGTTCAACACCACCACCACCGGTACAAGTTCAACCGTCATTTCATAAATCCGAAACTGATGCAAAAGATTTTGATCTGAAAATTTCACCAAACTTAATTTCTAAATCTGAAAGCATTGGAAAGTACTTTAAGGATGCAGCTTCGCTACGCAATGAAGAGGGAGATTTAGTGTCTGTGTCAAAGCTGGTGGATAATGCAACAAATATTATGAGTTTTGGCAGTTATTTTCGACCAGATGTCACAAACCTTGAACACAGCGATGAAGAAGGACTGGTAGCATCGGGCAGTGCATCGGAAAGTAATAATTCCGGTACAGAAGATCCCAATCCTGTTCAAAACAAGAAAAAATCAGCCTATAGTCTGGCACCGAATCGAGTGTCGTGTCCATATTGTCAACGAATGTTTCCATGGACCAGTTCCTTGCGACGTCACATTTTGACGCATACCGGTCAAAAACCATTTAAGTGTTCACATTGTCCACTGTTATTCACCACCAAAAGCAATTGTGATCGTCATTTACTACGAAAACATGGAAATGTAGAATCTGCCGTATCACTATATGTGCCACTCGAAGATATTCCAGAACCTGTAAAAGAAACACCTGTGCCCGTTCCAAAAGAAGAAGTAGCACCACCACAACCACCACCACCAAAACCAACAGCCACAGTTCCACCCGTTCAACTGAACATTCCTTCATTGAAGGTTGAACCACAAGTACAAAATCTTAATAGCACCGATCTGCCattcaagtgtcatctatgcgatggatcatttaccgaaagaatagcttgcctagaacatataaaacatTTGCATACTCAAGATTTTACACTGCTTATGGCAAAAGGGGCCATTGAAACAGACACTGACCATCAAATGGCTGCTGCTTCGGCTGAAGATGATGACAAGCAGGAATCGCGTGGAAAATATCCAGACTATGCTAATCGGAAGGTTATTTGTGCATTTTGTCTAAGACGTTTTTGGTCCACCGAAGATCTTCGTCGTCACATGCGAACCCATTCGGGAGAGCGACCATTCCAATGTGACGTTTGTATGCGTAAATTTACCCTCAAGCATAGTATGTTACGTCATCAAAAGAAACATACAAACACAAATCCAATTTGCAATGCAAACAGTGCGTCCGATCTGTCAGACGACGAACAACCCACTGCAAACAACATGATTCTATCGAGTGCGGCTAAAATCCTAAAAATTCCAGATTTAATTCCCAAAGAGCTATCTTGGAAACTACAACAGGAGCATAAAGAATTGCTGGCTATTCGAAGTGCTGAATTTCTGCGTAGTTTAGATCGTGATGGTTCCGGTGCGGCTGGTGCCGAAGATACGTCTGGACTTATTGGTAACCTTTTGGGTATCAGCGATCAAGGCATATTGAATCGTGTGCTGCTATCGTCAGCCGATGAAGCTGCCAAATTGTTGGGTGTTGAAAAATAA
Protein Sequence: MERRASTNSESSIEPMDISTKTTSSTDPNSSLALKSSDPNDSDNFESDRDDEYAKQPQHTNFVRRENPRNYENNLLIMRKKFRLNMPNNRNLNNNNNNNNNLQFNYDKIENLTRLHEQQRLMPTTQNIDKIGQDGHRSADSNENLNVSSSPEMTNYNQQNRSNNLTDLRYNCPICGKLSVTQHEFTEHIRSHNNSNNISSDDSQHFTCQICFKVLSSASSLDRHVLVHTGERPFTCKFCHVTFTTNGNMHRHMRTHKQRNEGESYESDGSTDSSVSSSTNNNNFHNHHLMDGKRKIIDEDSGASIKRRLKTINNNNIVNKPLSMVQQHQQSLQQNYASPTLPQFCCPVCVRSDFVDMLSLENHMDREHPSIQARCRYCEVVFKSHKALNAHRCAIHHKSPHITQGFKDLTFVDFSSEKFPLIAKSMCEQTMRTAITNQKFECLKCGRAFPCASAVDIHIKSCGIRAPDSPQDFSIRRRLTSNETTSDEDAKRDDFFAHLDLKNKSTTPAMDAYNACITNSMKLYDRSQMVQIKQERHTPQPPPSNYSDTKDLADIQSILSVTSSGGFLRQLDKSLPPVMPKELPFSREEEEAQDAFTAEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSAAGSGPYCCNMCPYSIHDKAALIRHMRTHNGDRPYECGICNYAFTTKANCERHLRNRHGKTTREEVKRAIIYHPSEDSSCDDPVKKMQIYNSSYDDDEHASPKDRSTPVSHLKEMLMPDKSLKIQVKSLEQLQQQQPIYDDDLDKELECDVEATNRCPVDLSMDALDLSKTSKLVVEKKEVEEEEDADGDEEDDEDDEEEEEVMGPKIDMAMFEKNQQLLLAQQQFFSETFPKIDPAHYFQLSQLYRNLMFPPAGFPIHPLFLQNSFLPPHSNEMKEHAKEPQLRQPTPNQQASPQPPMFPSGLMMPSMFPATNGPILPPLPPRNVMQEKQMQQQSQSPMSQPLPHSLRQSPHNMQTMTQQQQQHNQLPQQPAKPPVPSSNHSAGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHNILRRGSGGGGSNAANNSLNQSVPSSSPQQSLPPNVQQLHHMHQQSQQLQQPPHQNLPSAAVQNSLSAISDQVKYAILAQQLKCRNEKSDYFVNPIAQNHNNMIERQAAATIHFQTSADAAGPIKNSAPQPPADDDEDDDSELIIDEDSEPEDLSVVKTPELNEVNVAAKKVAENILEQAMRVNAVANRLQAAKTCSTPPPPVQVQPSFHKSETDAKDFDLKISPNLISKSESIGKYFKDAASLRNEEGDLVSVSKLVDNATNIMSFGSYFRPDVTNLEHSDEEGLVASGSASESNNSGTEDPNPVQNKKKSAYSLAPNRVSCPYCQRMFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPLEDIPEPVKETPVPVPKEEVAPPQPPPPKPTATVPPVQLNIPSLKVEPQVQNLNSTDLPFKCHLCDGSFTERIACLEHIKHLHTQDFTLLMAKGAIETDTDHQMAAASAEDDDKQESRGKYPDYANRKVICAFCLRRFWSTEDLRRHMRTHSGERPFQCDVCMRKFTLKHSMLRHQKKHTNTNPICNANSASDLSDDEQPTANNMILSSAAKILKIPDLIPKELSWKLQQEHKELLAIRSAEFLRSLDRDGSGAAGAEDTSGLIGNLLGISDQGILNRVLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -