Dfer000436.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- Sall1
- Assembly
- GCA_027564275.1
- Location
- JANSTW010088947.1:867-5839[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 6.2 3.8e+02 2.7 0.2 2 23 6 27 5 27 0.92 2 14 0.0067 0.41 12.0 0.1 1 23 1059 1082 1059 1082 0.96 3 14 0.22 14 7.2 0.8 1 23 1179 1201 1179 1201 0.95 4 14 0.0028 0.17 13.2 2.0 2 23 1204 1225 1204 1225 0.97 5 14 0.12 7.2 8.1 1.0 5 23 1235 1253 1233 1253 0.95 6 14 3.6e-05 0.0022 19.1 4.8 2 23 1260 1281 1259 1282 0.95 7 14 2.5 1.5e+02 3.9 0.5 6 23 1296 1313 1294 1313 0.97 8 14 0.0023 0.14 13.5 5.1 3 23 1320 1341 1318 1341 0.95 9 14 0.0068 0.42 12.0 0.1 2 23 1354 1374 1353 1374 0.96 10 14 4.3e-05 0.0026 18.9 0.8 1 20 1380 1399 1380 1402 0.94 11 14 0.00085 0.052 14.8 0.7 1 23 1410 1432 1410 1432 0.97 12 14 4.5e-05 0.0028 18.8 5.7 1 23 1438 1460 1438 1460 0.98 13 14 1.8e-05 0.0011 20.1 4.4 1 23 1466 1488 1466 1488 0.98 14 14 0.35 22 6.6 4.3 1 23 1494 1516 1494 1517 0.93
Sequence Information
- Coding Sequence
- ATGCAGTCACAATTACAATGTCCCGTTTGTACATTGTACTTACATGTTGGCATGAACTTACAAGTTCATTTGGACACCCATCCAAAAGAACAGGTTATCCGGGCGTTGGTAAATTTAACATTAACGCAACAACAGAATAACGACACCGATTCGATAGCCAATTCGTTTAAATGTACGCAATATGCTCCGATTCCTGATGATCCCGTCATAAGCGATAACAGTTTTCTGGTACCACAAGCCTATTACAATAGTTCAACACAATTGCAAGCAATTGAACCACCACCAATTCATCCGCACGTGCAAGAACCCATTCGTCAGCCACCACAGCAACACCAACAACTTATGATCCTTAAAAGTTGTAGCACAAGTGTCTATCGAAACGAAAATGCCACTCATCAACAATCAACGGCTGCCCAACAATTTATATCAAATAAAATTCCAATATCTGCTGTAGTGCCTGGTCATAATATGCCGACCACCAGCACAAGAATTCCAACAAAAAGTATGCACAATTTACCACCACCTCCTCCATACGGTTCTAATGTGGTTCACATAAGGCAACAAACAGAACAACAACAAGCACTACAGCAACTACAACAACTTCAACAAACCTCACGACTACCAAATCCACAACACATAATTCTTAATTGTGCGCCACCTGagcagtatcaacatattcaacaccaacaacaaacacaacaactgcaacaacaacaactgcaacgaccacaacaacggcagcagcaacaacttcaggaacagcatcaacaacaacccccaccacaatattcaagaccccaaaggcaatattaTTATCAATCAGGTGAACAGAATAATCAGGTAAATCAAATTCCGCCGTCGCCTACTCCACAGCCTACACTTCGATACAATAACAGAAACTTTGCGTCGGAAAATGTAAATAACTTAAGTGATAATTACGACGATTTTCAAGAAGTCAGTGGCGAAGATGTAGAAAACAACCACAATCAATGTTCAGAATTAAATATAATGGTTGATGAACATTTACAGGAGCTTGACCAAGAAACTGAAGGCTGCTTACTGACAAATGGTGAAGAGAATCAAAATGAGGAAATGGAAGAATTCGAAGAACAGCAGTCTAATGAAGAAAACGAAAATCAGTTAAATGATGAAAATAATGGCGGTGGTGTTGAGGGTGGTGGAATGTCAGAATCAGACAATCAAAATGAAGAACACCTAGTACAACCACAACCAGTGCGACCAGCTTCAGTTATTCACATAAACGATTCTTATTCAGATGATCAGCCAGCACAACAACCGCCACAAACGATTCCATTACAACAGAAAAAGTTAACCGAAGGACTTCGGGTCCTGAGCAATGTTAAATTGGAATCCAATAAAATATTAGATGTATCGTGTCTGGATCGACGACTAAGTGATGCTATAAATTTATCCGATGTATTCACCAGACGTTCAATTGACATGCCATTTACCGTGATTGATACCGTATCGAATAAACAAAGTGAGGCAGCAAATAAACCACAGGAGGCGGAGGAAATCGTTGAAGAACCAGAACGTTTGACGCAAACTGCCGAAGAAACTTCCGCAGAAGAGCAGAACACCGACAGCATACGAAATGTTATAGTAAAAGTGGAAGGTCCACAGGCTTGTTCATCCAAAACAATCGAAAATTTAGATAAATTGCCAAGTGAATTAACAATAAACAGTGATTTAATGGTGGCAACAGCAAGCACAAGTAGGGCTGCGACAAGTGTGATTCGTTTGGCATCTCCAAAGAAATCTTCACCAAGCGAACCGTCAGTTTCAAGGGCACCACTGCTCAAAACCCCCTTCGTAAAGGCGCCCAAAAAACTTGTTGTTAAATTCAAGAAACCATTTGTTCCGGTTGTTGAAGAAGATGCTAACCTACAGCCACCGATTGTCGTTGATACTGTAGACTTAGATTCGAGTTTGTCTGAATTTAAAAATGAAGAACAACTTGACATAAATTGTAGCGAGATTGATAAAACCGAGGTGTTCAAGCACGAAGTAGACATCAATGACTATCCGTTTGATACGCCCTTTAGTCCGCTGAGGCAATCTTATACGCCACCAATTTTACTAGAAAATATCGTCGATGAAAGCGAAGAAGAAAAAATAAAAACTGATTTCGAAGTCGTAAATGTGTTCAATGCGGAAAATCCTGAACCAAGTACGTCACTTATCGATGAAATTGTAGTTGAATCTATTATCGAAAAGGAAGACGAACAAATCACAGAACATACTTATGTTATTACCGAAGTAAATATGGAAATCGATGAGTACATGTCGTCAACCGAAAATAATGTGTCAAAACCCGACGAAACGCCGGCCGTTGTCTCGGAACTACTCTGTCCTAGTGCTAAAACGAATTCAACTAATATAAAAATAGAATCATGGTCACAACATTTGGCCAACGATGAGTTGAATGCAATGAAAGAAACAGACAGTAAAGCAAATATTGAATTAACCACCGACATCTATTCAGCATCCACCTCAATTGCGTCTACCTCATCATCATCATCATCACATCCAGCATCCACGTCGCAGAGTAATAATTTTATAACGGCCGGGCCAAGTCGACTTGACTACGGCCTTTCCTCGTTGCTCGGTTACAATGATCCAGTCGATGGTGACGATTTTTATACGGGCGTCCGATTGTCACCCATCGGATTTACACAAGAAAACTATAATTGGAATCAACGCTTCAGTCCACAATATGCACCGTACGAGGGAACGGAGAAAAATTCGTACATGGATTTAGATTTGTGCAAAAATACAAATTCCTATGATGAGCGGGCACCATCTACGGACAGTTTAAATATACGAACCGATGAGAAGATGCCGGCTAAGGGTGAAATATCGGAACAAGAAAGTAATGGGGACATTGATGGATCATGGAGTCACCAGATTTACCCGCTACAAGATACATTGCCGCGTTATACAAGCTCTTATGATACAACGGTTGCCCGCGAAAGTTGGAGTCTGAGTAACGATCAAAATCTATCACACAATAATATGGAAAATATTATATCGACAATTTTACCAAAATTCACTCCATTAGAATCAACATATCCCGAGACCGACATAAAACCATCAACGGAAGATCTTCTCATACCAAAAGTAGAAAAAACAAAAACGCTAAAGCCACGCAAATATCGATGCCCCGAATGCCCGTTAGTGTTCTCCGTACTGAAGGAGAAACGAAGTCATCTAATTGTCGTTCATGACTATCAACGTCCCGTACACAAAAAGCACAATGTAACGTGTACGACGACAAGTGCCAGTGGCAGTTTGAGTACAGTCACAAGTACGATAACAAGTAATTGTAGTACGGCTATTGAGAATTCGGAACTGGATGCAAAAAAGACGATAAAACAAGAGCCACGCGAAACACAGACTAGCATGACCAGGTACTTGCTGAGCTATAACTGGAACATATTGCGACAGAAATTAACGAGTGAAGTTAAGGGGGAAGAGGTGAAGCTGCCAATTTTGCCAATTGAGAGTAACGTTTATCTGTGCATGGTGTGCAAAGAACGATTTTACAGCATTAAATCATACGATCAACATATGTCAATTCATCCGGGCGAATGTTACACTTGTGGCAGGCTATTTAAGCATTGGCTTAACTTGAGTGTTCACTTAAAGCGTCACCTGAACATGCGAGAATATGGATGCATTCAATGCAGTAAGAAATTTGTTTTACGGCAAAATTTACTGGAACACATGTACACGCACAGCGGTGAAACACCGTTACAGTGTAAAGTGTGCTCGAAAAGATTTCGTCGGTATTCGAATTTAATACAGCATCGAAATCGACATCATCTAAAGATACGACCCAAAGAAATGGACTACATTTGTTCGTGTGGTGAAGTCTTTCATTCACAGGCGAAAATTGCCTGGCATCGTGAGACACACGACAAAAAACCAAAATGTTGTCCGTATTGTCGCGAACGATTTATTCACAAAAATAGTCTGTCACGGCACATTCGACTGTCGCACACGGACCGTTTTACAACGTTCAAAAATACATCTGTTGAATGTCCCGTATGCAAGCAAAAATACATGAAGTCCAGTCTGAAGGCACACATGGCGATTCATTCGAAAATGGAGAAATTCGAATGCAGCATTTGTAATAAAGGATTTACAACAAAGTGGAATCTGAAGCAACATAAGTGGATACATGCAAGTCGCTCGTCGAAACCATTTAAGTGTATCATGTGCACAAAGGCATTTATACGTGAGGCTGAATTTACCTCGCATATGAACACCCACAAATCAATTAAACCGTACACTTGCGATCATTGTGGCTGTCAATTTGCTAGAAAATACAATCTCTTGCGACACACAcgcgaacatgagacgccgaagcggcatcgttgtgacgattgcggaaaagttttccatcgtgcatactatttgaccgagcacagacgttcgcacacgggcgaaagaccattcgaatgtataatttgtggtaaaacttCGACCACCAAAACGAATCACAATAAACACGTTAAAATTCATCATGCACGTGATCCACTTACGGCCGAAGGTTAA
- Protein Sequence
- MQSQLQCPVCTLYLHVGMNLQVHLDTHPKEQVIRALVNLTLTQQQNNDTDSIANSFKCTQYAPIPDDPVISDNSFLVPQAYYNSSTQLQAIEPPPIHPHVQEPIRQPPQQHQQLMILKSCSTSVYRNENATHQQSTAAQQFISNKIPISAVVPGHNMPTTSTRIPTKSMHNLPPPPPYGSNVVHIRQQTEQQQALQQLQQLQQTSRLPNPQHIILNCAPPEQYQHIQHQQQTQQLQQQQLQRPQQRQQQQLQEQHQQQPPPQYSRPQRQYYYQSGEQNNQVNQIPPSPTPQPTLRYNNRNFASENVNNLSDNYDDFQEVSGEDVENNHNQCSELNIMVDEHLQELDQETEGCLLTNGEENQNEEMEEFEEQQSNEENENQLNDENNGGGVEGGGMSESDNQNEEHLVQPQPVRPASVIHINDSYSDDQPAQQPPQTIPLQQKKLTEGLRVLSNVKLESNKILDVSCLDRRLSDAINLSDVFTRRSIDMPFTVIDTVSNKQSEAANKPQEAEEIVEEPERLTQTAEETSAEEQNTDSIRNVIVKVEGPQACSSKTIENLDKLPSELTINSDLMVATASTSRAATSVIRLASPKKSSPSEPSVSRAPLLKTPFVKAPKKLVVKFKKPFVPVVEEDANLQPPIVVDTVDLDSSLSEFKNEEQLDINCSEIDKTEVFKHEVDINDYPFDTPFSPLRQSYTPPILLENIVDESEEEKIKTDFEVVNVFNAENPEPSTSLIDEIVVESIIEKEDEQITEHTYVITEVNMEIDEYMSSTENNVSKPDETPAVVSELLCPSAKTNSTNIKIESWSQHLANDELNAMKETDSKANIELTTDIYSASTSIASTSSSSSSHPASTSQSNNFITAGPSRLDYGLSSLLGYNDPVDGDDFYTGVRLSPIGFTQENYNWNQRFSPQYAPYEGTEKNSYMDLDLCKNTNSYDERAPSTDSLNIRTDEKMPAKGEISEQESNGDIDGSWSHQIYPLQDTLPRYTSSYDTTVARESWSLSNDQNLSHNNMENIISTILPKFTPLESTYPETDIKPSTEDLLIPKVEKTKTLKPRKYRCPECPLVFSVLKEKRSHLIVVHDYQRPVHKKHNVTCTTTSASGSLSTVTSTITSNCSTAIENSELDAKKTIKQEPRETQTSMTRYLLSYNWNILRQKLTSEVKGEEVKLPILPIESNVYLCMVCKERFYSIKSYDQHMSIHPGECYTCGRLFKHWLNLSVHLKRHLNMREYGCIQCSKKFVLRQNLLEHMYTHSGETPLQCKVCSKRFRRYSNLIQHRNRHHLKIRPKEMDYICSCGEVFHSQAKIAWHRETHDKKPKCCPYCRERFIHKNSLSRHIRLSHTDRFTTFKNTSVECPVCKQKYMKSSLKAHMAIHSKMEKFECSICNKGFTTKWNLKQHKWIHASRSSKPFKCIMCTKAFIREAEFTSHMNTHKSIKPYTCDHCGCQFARKYNLLRHTREHETPKRHRCDDCGKVFHRAYYLTEHRRSHTGERPFECIICGKTSTTKTNHNKHVKIHHARDPLTAEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -