Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010125631.1:4065-7302[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.8 1.1e+02 4.3 2.5 3 23 14 39 13 39 0.81

2 15 3 1.8e+02 3.7 0.5 2 21 50 69 49 70 0.90

3 15 0.6 37 5.9 3.0 1 22 83 104 83 105 0.83

4 15 3.9e-05 0.0024 19.0 0.8 1 23 141 163 141 163 0.97

5 15 1.2e-05 0.00072 20.7 1.1 1 23 169 191 169 191 0.98

6 15 6.6e-05 0.0041 18.3 1.2 2 23 196 217 195 217 0.97

7 15 4.5 2.8e+02 3.1 0.1 3 19 228 244 227 249 0.76

8 15 6.2e-05 0.0038 18.4 0.8 1 23 264 289 264 289 0.96

9 15 0.00059 0.037 15.3 2.3 1 23 296 319 296 319 0.98

10 15 0.048 2.9 9.3 0.2 2 23 324 346 323 346 0.92

11 15 0.00089 0.055 14.8 0.2 1 23 379 402 379 402 0.96

12 15 1.9e-05 0.0012 20.0 1.8 1 23 408 430 408 430 0.98

13 15 0.5 31 6.1 3.4 1 23 436 458 436 458 0.98

14 15 6.9e-06 0.00042 21.4 1.4 1 23 464 486 464 486 0.98

15 15 0.018 1.1 10.6 0.4 1 23 492 517 492 517 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.8	1.1e+02	4.3	2.5	3	23	14	39	13	39	0.81
2	15	3	1.8e+02	3.7	0.5	2	21	50	69	49	70	0.90
3	15	0.6	37	5.9	3.0	1	22	83	104	83	105	0.83
4	15	3.9e-05	0.0024	19.0	0.8	1	23	141	163	141	163	0.97
5	15	1.2e-05	0.00072	20.7	1.1	1	23	169	191	169	191	0.98
6	15	6.6e-05	0.0041	18.3	1.2	2	23	196	217	195	217	0.97
7	15	4.5	2.8e+02	3.1	0.1	3	19	228	244	227	249	0.76
8	15	6.2e-05	0.0038	18.4	0.8	1	23	264	289	264	289	0.96
9	15	0.00059	0.037	15.3	2.3	1	23	296	319	296	319	0.98
10	15	0.048	2.9	9.3	0.2	2	23	324	346	323	346	0.92
11	15	0.00089	0.055	14.8	0.2	1	23	379	402	379	402	0.96
12	15	1.9e-05	0.0012	20.0	1.8	1	23	408	430	408	430	0.98
13	15	0.5	31	6.1	3.4	1	23	436	458	436	458	0.98
14	15	6.9e-06	0.00042	21.4	1.4	1	23	464	486	464	486	0.98
15	15	0.018	1.1	10.6	0.4	1	23	492	517	492	517	0.86

Sequence Information

Coding Sequence: ATGATCCATACCTTATCCGTACACTTGCAACATGGTCAATGTAATTGCATTATGGAACTTTGTTGTAAATCATTTAAAACGGACGCTGAGTTAAAAAATCATTTATTCTTAGTTCATCAAAATGTTGTCAAACCAATAATTACCATATCGTGTACAACATGCACGCAACAATTTGATTCAATTGTCTTATTTGGCAAACACATTTGTTTGGCCGATTCGTATCGGGAGAGATCGGAGGACGAAGATTATAGTTGTAATAATTGCGATAAAAAGCTAACATCTCAAAAAAGATTATTGTTCCATAAACAGTTTCACTTGGAGAATGCACGGCCAAAATGTTGCGTAATATGTGAATTACTATTTGATGATGACAGTAGATTCTTTGAACATGTTATGTTTGCCCATGAGAAAATTTTCGAATATTTTTGTACATTTTGTGATAAGAGTTTTTCCGTCGAAGCTGAGCTAAGTCGACACGAGCGTTTACATGCGGCCGATCGAATTTACGAATGTGAAGAATGTGGAAAGTCATTTTGTAATGTGCCAACGTTACGAGATCATTATCTTTCCCATACGACAAAATTGAAATGTGATATTTGTAAGAAAACTTATGGAAGAATTTCAAGATTACGAACGCATATGCTTACACATGAAACAAAACCGATGACAGAGTTACCGATTTGTGAACAATGTGGAAATGTTTTTGAAAATGACGCCTTAGCTCTGCAGCACTTCAGCTTATTGCATAATGCAACGAATTCCGATGAAATACTCCTAATACATCGACACTATATTTGTGATGTTGAGAATTGTACGAAAACCTATCGGCAGTGGTCGTCGTTAGTGTCGCATCGGAAAACTTTCCATTTGTTAAATCCTTCGATCTTTAAGTGTGCCCTGTGTAGTAAAACATTCTATACCACTACTAAGCTGAGCGCTCACAAACGATCCGAACATGAAATCGGATTAAATTGCCCAATGTGCAAAATGATATTCGTCAGTAAAATCGCACTGGACCAGCACTTTGCTCGTACACACATTCGACACACAAAATTGAGTAAAAGAAAGAGTATCAGAAGTAAATATGATGCAAATAAAAAATATATTAGATACGTTTCAGAAGAAAATGGTTTGTTTTATTGTAAGGAATGTGGGAAAAACGGTAATAATCGATCCAATATCATACAGCATGTGGAAATGGTTCACCTGCAAATTCTTAATTATTTCTGTAACGAATGTAAGAAAGGATTTTATTTACGCTCTGATCTTACTGATCATCAGCGAATGCATACCCTAGAAGCTCCATTTAAATGTAAATTCTGTGATTATAGGAATAGAAGACAGTCTGTGGTAAAATTGCACGAAAGAAAGCATACAAATGAACGTCCCTACAAATGTCCAGACTGTCCGAAAAGTTTTAAACGTTTATATGTTATGAAAAATCATGCTAAAAAGCATAATGGTGTAAGAGAATTTGTATGTGAAATTGTCGACTGTGGTAAAACCTTTATAACACAAGCTGCTGCTAATTTTCATATAAAACATAAGCACAACATTATAACGTGCAGTTTTGTGGAAGAAAGCAACGGCTGCCCGGATATCTATGAACAATTCCATGTTTTTCGTGATATTGATAAAGTTATTGAATGTGAATCATGA
Protein Sequence: MIHTLSVHLQHGQCNCIMELCCKSFKTDAELKNHLFLVHQNVVKPIITISCTTCTQQFDSIVLFGKHICLADSYRERSEDEDYSCNNCDKKLTSQKRLLFHKQFHLENARPKCCVICELLFDDDSRFFEHVMFAHEKIFEYFCTFCDKSFSVEAELSRHERLHAADRIYECEECGKSFCNVPTLRDHYLSHTTKLKCDICKKTYGRISRLRTHMLTHETKPMTELPICEQCGNVFENDALALQHFSLLHNATNSDEILLIHRHYICDVENCTKTYRQWSSLVSHRKTFHLLNPSIFKCALCSKTFYTTTKLSAHKRSEHEIGLNCPMCKMIFVSKIALDQHFARTHIRHTKLSKRKSIRSKYDANKKYIRYVSEENGLFYCKECGKNGNNRSNIIQHVEMVHLQILNYFCNECKKGFYLRSDLTDHQRMHTLEAPFKCKFCDYRNRRQSVVKLHERKHTNERPYKCPDCPKSFKRLYVMKNHAKKHNGVREFVCEIVDCGKTFITQAAANFHIKHKHNIITCSFVEESNGCPDIYEQFHVFRDIDKVIECES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -