Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010111975.1:640-3114[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 9.4e-06 0.00058 21.0 2.7 3 23 265 285 264 285 0.98

2 10 0.00015 0.0091 17.2 0.2 1 23 291 315 291 315 0.96

3 10 0.00012 0.0071 17.6 0.4 1 23 321 343 321 343 0.97

4 10 0.028 1.7 10.1 0.4 1 23 349 371 349 371 0.98

5 10 0.013 0.79 11.1 3.2 1 23 377 400 377 400 0.97

6 10 1.4e-06 8.8e-05 23.5 1.1 1 23 408 430 408 430 0.98

7 10 0.00015 0.0093 17.2 0.3 1 23 436 458 436 458 0.97

8 10 3.6e-08 2.2e-06 28.6 0.1 1 23 464 486 464 486 0.98

9 10 0.00093 0.057 14.7 2.7 1 23 492 514 492 514 0.98

10 10 3.8e-05 0.0024 19.1 1.3 1 23 520 542 520 542 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	9.4e-06	0.00058	21.0	2.7	3	23	265	285	264	285	0.98
2	10	0.00015	0.0091	17.2	0.2	1	23	291	315	291	315	0.96
3	10	0.00012	0.0071	17.6	0.4	1	23	321	343	321	343	0.97
4	10	0.028	1.7	10.1	0.4	1	23	349	371	349	371	0.98
5	10	0.013	0.79	11.1	3.2	1	23	377	400	377	400	0.97
6	10	1.4e-06	8.8e-05	23.5	1.1	1	23	408	430	408	430	0.98
7	10	0.00015	0.0093	17.2	0.3	1	23	436	458	436	458	0.97
8	10	3.6e-08	2.2e-06	28.6	0.1	1	23	464	486	464	486	0.98
9	10	0.00093	0.057	14.7	2.7	1	23	492	514	492	514	0.98
10	10	3.8e-05	0.0024	19.1	1.3	1	23	520	542	520	542	0.98

Sequence Information

Coding Sequence: ATGAGTGAAATGATCGATTTGGATGTGGACAATTTCTTCTATTTATGTCGTTTGTGTGCACTGAAATGTTCACTGCCCGGTGTTGCGATCTTTTCGAATGAAGGAATTTGCCATGAAATTCGTAAAAAAATTGAAAATTGTTTTAATTTTACCATAAACGAGCAGGATACCTATCCGAAAACAATTTGCCACGATTGTCTGTACAAATTGGACTATTGCTATGATTTCCTGTGCAAGAGTCTCGAGTCGCAGCAGTTTTTGTCAGAATTGCTGAAACATGAAATATTCGATGCAATCTACATGACCAGAGATGATCTGCAACATCAGCAATTATGCCTCGAGCTGAATGAACTGCCCGATCAAACGGAAATCCAAGATCTGGAACATTTGGTGGAGGCTGCCCATATTCACGCTGATAGCAACGATATTACGCAAATTATTCAATATCATGATGGGGAGATAAACGAGGAACAAATTAAAAATGAAATTAATCAATTGGACAAAATGAGCGCAATGCAAAAGGACGTAGACGACAATGATTCCCTGCCCGACATCACTCTCTATTCATTCGATAATATTGCAAAGGATGACAACGAATATCTAAATAATGCAAATTACGATAACAATAATGCCGAAATATTGGAAAATGTTTTCGACAATGTTGAAACACCAGCCGGAACAATCGATGAAAATGTACAAGCACCTGCGGAAATTTTAGCAGTTATTGAGAATGTTTTGGAGGCTGAAATGCCAAAACCTAAAGTAAAATCAAATAAAAAAGTACCAAAGATTTGCTCATATTGCCACAAAGAATTTGGAACAAATTATAAGttaaatgaacatatgcgaacacatactgctgaaactccctttaaatgCGCAGCAGACGGTTGTAACAAAACATTTAGATCGAAAATCGGCCTACAACAACACGAGGCCACCCATACGGGCAATTTTAAATTTTCATGCGAAATATGCGGCAAGGGGTTTCAAATCAAAAGCTATCTGACAATTCACTCGAAAGTCCACTCAAATCAGAAGACATACAAATGTTCCACATGCGACGTACTTTTGAAGTCAAAGCAAGCTCTAATCGATCATGAGAATCGTCACCTAGGTGTTAAAGCCTATGAATGTTCCCAGTGTGATCAGAAATTTATTACTAAATCATTGTGCATTACGCACGAGAAAACGCAACATTCTGGCGAAGAAATGGCAAAATATCCGTGCTCGgtgtgcagtaaaatgtttgtacgacgaagttacctgaaaactcacatgacaattcatagtggaaataaggcttttatttgtgatatttgtggcaaagattttctaacagccaccgatctgaagcaacacctcaccacgcatacgggagaaagagaatttgtatgtgaagtttgtggtaaagctttttccagagcagacggcctaaatgttcacatgcgatcacataccgggcaaaaaccttacaaATGTGATTTCTGTGGTCAACAATTCGCCCAAATTTGTACGTTAAAAATTCACACACGTTTGCATACTGGTGAAAAACCATACGTATGCACGCTGTGTCCAAGGCGCTTTGTTGCGCGTAGCTATCTAAAAACTCATTTAAAAAAACACAGTCCAAAAGTTCCGGTTGCCACGGAATTCGATAGTATTGAACCGCAACAGCAACTTTGCCAATTGTTAGATGACAATCAAGTACAGAATGATTTAGTCTTTGACGATGAGCATCAAATGTTGGATCCACAGAATAGTGATTTATTTGAATTAAACGAAATTATAGCAACGTGA
Protein Sequence: MSEMIDLDVDNFFYLCRLCALKCSLPGVAIFSNEGICHEIRKKIENCFNFTINEQDTYPKTICHDCLYKLDYCYDFLCKSLESQQFLSELLKHEIFDAIYMTRDDLQHQQLCLELNELPDQTEIQDLEHLVEAAHIHADSNDITQIIQYHDGEINEEQIKNEINQLDKMSAMQKDVDDNDSLPDITLYSFDNIAKDDNEYLNNANYDNNNAEILENVFDNVETPAGTIDENVQAPAEILAVIENVLEAEMPKPKVKSNKKVPKICSYCHKEFGTNYKLNEHMRTHTAETPFKCAADGCNKTFRSKIGLQQHEATHTGNFKFSCEICGKGFQIKSYLTIHSKVHSNQKTYKCSTCDVLLKSKQALIDHENRHLGVKAYECSQCDQKFITKSLCITHEKTQHSGEEMAKYPCSVCSKMFVRRSYLKTHMTIHSGNKAFICDICGKDFLTATDLKQHLTTHTGEREFVCEVCGKAFSRADGLNVHMRSHTGQKPYKCDFCGQQFAQICTLKIHTRLHTGEKPYVCTLCPRRFVARSYLKTHLKKHSPKVPVATEFDSIEPQQQLCQLLDDNQVQNDLVFDDEHQMLDPQNSDLFELNEIIAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -