Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010095223.1:1553-3596[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.5e-05 0.004 18.3 0.8 1 23 222 244 222 244 0.96

2 10 1.5e-05 0.0009 20.4 1.1 1 23 253 275 253 275 0.96

3 10 0.00021 0.013 16.7 0.5 1 23 281 303 281 303 0.97

4 10 1.4e-05 0.00084 20.5 3.4 1 23 309 331 309 331 0.98

5 10 1.7e-06 0.0001 23.3 0.9 1 23 337 359 337 359 0.95

6 10 0.011 0.65 11.4 1.9 1 23 365 387 365 387 0.97

7 10 4e-05 0.0025 19.0 0.4 1 23 393 415 393 415 0.98

8 10 1.7e-06 0.00011 23.3 2.3 1 23 421 443 421 443 0.98

9 10 2.1e-06 0.00013 23.0 1.1 1 23 449 471 449 471 0.99

10 10 0.00021 0.013 16.7 0.8 1 23 477 499 477 499 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.5e-05	0.004	18.3	0.8	1	23	222	244	222	244	0.96
2	10	1.5e-05	0.0009	20.4	1.1	1	23	253	275	253	275	0.96
3	10	0.00021	0.013	16.7	0.5	1	23	281	303	281	303	0.97
4	10	1.4e-05	0.00084	20.5	3.4	1	23	309	331	309	331	0.98
5	10	1.7e-06	0.0001	23.3	0.9	1	23	337	359	337	359	0.95
6	10	0.011	0.65	11.4	1.9	1	23	365	387	365	387	0.97
7	10	4e-05	0.0025	19.0	0.4	1	23	393	415	393	415	0.98
8	10	1.7e-06	0.00011	23.3	2.3	1	23	421	443	421	443	0.98
9	10	2.1e-06	0.00013	23.0	1.1	1	23	449	471	449	471	0.99
10	10	0.00021	0.013	16.7	0.8	1	23	477	499	477	499	0.97

Sequence Information

Coding Sequence: ATGGATTTGGAGATAATTAACGGCTGCAGTTTTGTGGACGCGTGTCGTGTATGTCTGATTCGGAATATCGAAGACATTCAAATGGCCGCCTTGTTTGAAACAACAATAAATGCATTGAACATTTCCCTTTCGGATATGTTTACAACTTTTACTGCATTACAAATGGATCGCAACGATGGATTGCCCACACTGATTTGTTCAAATTGTCTAAATAGTTTAGTTTCCGCATACCAATTTCAACTGCAATGTATAAAAACGGACAATGACATTCGTATGGCTTTAGGATATATACGAGATCAAGCTGCCGCTGCTGCGGCTAGTACTGCGATGACCATGGAAAACCATACAAATGTAGTTCACATAGCTGAACATGATGCCGCCAATGAAAAGGATTCTGCAATAAAAATGGAACAAAATATTATTATATTAAATAATGAAATCATAGGAAATGATTCTATTTTCGAGAAAGTAAAAAATGAAAATGATTTAAATTTGTCTTATCCGTTAAACGTTGAACAACCCAACGAAGAAAACCATGAAATCAACAATGAAACAGCCTCTTCCGATACGACTGATTCAGCTGAAGACGATCATCAGTCCGAGCAAattatccattcagatgaaatgcaaatTGTCACAGTTGAGACGGTCCCGGCAAAAGTTTTCCTTTGTTCAGAATGTCCACGCCAATTTCAAAAACAAGAATCTCTTGCCTCACACATGAAAACGCACAAAGAAGCGATGAGTAAAAAGGAATATCTGTGTGAATATTGTCCGAAATCATTTACGAAATTGAATCTGTTGACACGGCATGCTAAGTCCCATGAGGAAggtaaactacatcgttgtaatatatgcgaaaaaacgtttgcccttgggggccagttaattgatcacatgaataaccacaaaggtgttaagccgcatgtttgtccgatttgcaataaaggattccaacaatcttgtacgcttaaggatcacattcgcacgcataatggtgaaacaccgtttttatgctctgaatgtggtaaatcatttaataacggaagcaatttaaggcaacatttactgcgacacaccggcgttaaaccgtTCGCATGTACTGAGTGTCCAAGTCGGTTCAGTTGTAAAGgtggtctaaaatcacatatgacaacacatagcgacgtgagaccatttgtttgcgatatttgtggatcagcatttacgaaaacctattccttggcaaagcataagcgcattcataccggtgaacgaccttatgcgtgtgaaatgtgtgacatgagatttaattcgtctgatcacgttaaacgccatatgcgaacacataccggcgaaaaaccatataaatgtaatttttgtgatcgtgcatttgctcaaagtaatgatttagttaagcatactcgatcacacattggcagcaatacatatcaatgCAAggaatgtccggctgcatttcggttgcacagtgaattaagagcacacaGTAAACTACATTTTTTACATCAAAAGAGTGGTGTCGCCGTTGAGGCTATAAGTGATAGTCAGCAAATTGCAATATTACCACAAATTGCCGAGGAAGATTCAATTGCATTGGTTAAAGTTGAATTACCAGATACAAATAATGTACCAAACCGTGAACCGATCAGAGGAGACGGTGGTCAACACAATACAAGTAGCTGTAGTGTGCAAATGATTGAAGCTATCGATGTTGTCGTAACGGAAAAAAATCTAAATAATTATTTTCAATAA
Protein Sequence: MDLEIINGCSFVDACRVCLIRNIEDIQMAALFETTINALNISLSDMFTTFTALQMDRNDGLPTLICSNCLNSLVSAYQFQLQCIKTDNDIRMALGYIRDQAAAAAASTAMTMENHTNVVHIAEHDAANEKDSAIKMEQNIIILNNEIIGNDSIFEKVKNENDLNLSYPLNVEQPNEENHEINNETASSDTTDSAEDDHQSEQIIHSDEMQIVTVETVPAKVFLCSECPRQFQKQESLASHMKTHKEAMSKKEYLCEYCPKSFTKLNLLTRHAKSHEEGKLHRCNICEKTFALGGQLIDHMNNHKGVKPHVCPICNKGFQQSCTLKDHIRTHNGETPFLCSECGKSFNNGSNLRQHLLRHTGVKPFACTECPSRFSCKGGLKSHMTTHSDVRPFVCDICGSAFTKTYSLAKHKRIHTGERPYACEMCDMRFNSSDHVKRHMRTHTGEKPYKCNFCDRAFAQSNDLVKHTRSHIGSNTYQCKECPAAFRLHSELRAHSKLHFLHQKSGVAVEAISDSQQIAILPQIAEEDSIALVKVELPDTNNVPNREPIRGDGGQHNTSSCSVQMIEAIDVVVTEKNLNNYFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -