Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010081128.1:867-3119[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.51 32 6.1 0.1 5 23 332 351 329 351 0.89

2 11 0.00012 0.0072 17.5 0.5 1 23 380 402 380 402 0.99

3 11 7.1e-05 0.0043 18.2 1.9 1 23 408 430 408 430 0.97

4 11 0.0019 0.11 13.7 3.5 3 23 444 464 443 464 0.98

5 11 0.00018 0.011 17.0 0.4 2 23 471 492 470 492 0.96

6 11 5.5e-07 3.4e-05 24.9 0.4 1 23 498 520 498 520 0.98

7 11 6.8e-06 0.00042 21.4 0.0 1 23 526 548 526 548 0.98

8 11 2.4e-05 0.0015 19.7 0.1 1 23 554 576 554 576 0.98

9 11 4.4e-06 0.00027 22.0 0.4 1 23 582 604 582 604 0.99

10 11 1.7e-05 0.0011 20.1 4.1 1 23 610 632 610 632 0.97

11 11 0.035 2.1 9.8 2.2 1 23 638 661 638 661 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.51	32	6.1	0.1	5	23	332	351	329	351	0.89
2	11	0.00012	0.0072	17.5	0.5	1	23	380	402	380	402	0.99
3	11	7.1e-05	0.0043	18.2	1.9	1	23	408	430	408	430	0.97
4	11	0.0019	0.11	13.7	3.5	3	23	444	464	443	464	0.98
5	11	0.00018	0.011	17.0	0.4	2	23	471	492	470	492	0.96
6	11	5.5e-07	3.4e-05	24.9	0.4	1	23	498	520	498	520	0.98
7	11	6.8e-06	0.00042	21.4	0.0	1	23	526	548	526	548	0.98
8	11	2.4e-05	0.0015	19.7	0.1	1	23	554	576	554	576	0.98
9	11	4.4e-06	0.00027	22.0	0.4	1	23	582	604	582	604	0.99
10	11	1.7e-05	0.0011	20.1	4.1	1	23	610	632	610	632	0.97
11	11	0.035	2.1	9.8	2.2	1	23	638	661	638	661	0.95

Sequence Information

Coding Sequence: ATGAGTGCCGTGGAATATACAAGTTACGACAGTGTTTGTCGAGGATGTTTGGGAAAAAAGGGTGAAATGAGACCTTTATTCGGAACTTGCTTGGATGCGATGCTGATGAATGTGGCCGAAATTGAGGTTCACAAGGGTGATGGTTATCCCGAGCTTATGTGCGTTCAATGTGTTCTTCAAGTTAGTCGAGCCTTCACATTTAAGAAACAATGTCAGCGATCTGATAATATGTTACGGAAATTCAAGGAAAATAAAAAGACGGAAGAGTCGATAACAGAAACGGTTACACAAAGTGAAAGTACAATTATTGAAGATCCCGATGCATTGTTGAACTCGAAGAAAAAAATTGCCAGAAGGTATTTTATTGTACAGCCACAAGCAGCTGAAATGAAGCAGTCACATACCGAAGAGCAATCGCAGCCAATTCAAGAGCTACAGCAATCTAATGATTTTCAACAAATTATAGAACCAATCTCTATAATCTCAGACACAAAACACAATATCCTTGATTATAATATGCAAGGCAATGTACAAGGATCCGTTGAGGTAGAATTTAAAGATCCAAGTAATGGTGAAAAACGGTACTTAATTGTTCAACGACTGCCGATGATGAAGAATGAGTACGGCGGTGATACGGCAGAGTGCAATGATCAAGATATTCAAATTGTCGAGGAATGCGATGGTCTGCAATTAATTGGTGGTTTTCATGAAAATCAAATTATAATTTGTGAAGACGAATTGTTGAAGGATAATGATGCTGATGATGATGGTGGTCAAAATAAAACAATTAATTTACATGGGATAAGCTTTACAAATGAAGATATGGGCGCATTGCCACTATCGACTGAATTAATAACTGAACATTTTGATGTCTATTCCAACGATGAAGTTTCAAATAATGACCATGACTCAATGATGGTTGCTATCAATAATCATGCAAACGATATATTTTCATCAGACATTGAGAATGAAGAACTAAGATCAATGTGCATCGAATGTAATCTTGATTTTGATTCATTGGAAGATTTGAAGTTACATCAGGAACAAGTTCATTCTGTGGAGATTGATAAACAAAATCAAGAGGAACAGTTTACGGAACAAATTTCGGATTTAGATGGCAATAAATTTAAATGTCAATATAAAtgtaacgtctgtgataaaatatttgctgaaagcaaaattctaagacgtcatctgaagatccatagtctaaacaagccgcatgtttgtggcatttgttacatgtcgtttgcggaaagttctaatttaactaaacatactaagaaacatacgggcgaactgcgcaacgtgattggtaaaccaaatttatgttcgttttgcggaaaacgttttaaatgggccagttcattgtcaaaacatatgaaacatcataccagacataaaattctcaattgtccacattgtccgaaatattatgtcgaagctcgttcactgaacatacacattcgaagtcatactggtgagaaaccatttgtctgcactgtttgcaacaaaggattcacacaattgggcaatttagagaaacacactcgagtgcatacgggtgaaaagccctttatatgcccggtttgtggcaagggattttctcaaagtggatatgtggcaatacacgttcgaacgcacaccggtgaacgaccgtatatttgtacggaatgtggcaaaggctttgccggctcaaatactctagccattcacaaacgcactcatacaggcgaacgtccatatccgtgtaacacctgtgataagacatttgcacgccaagagacggccatcattcatcaacgaacccataccggtgaaaagccacacatttgtcacatttgtgaccgaggttttacaagttccggtcacttatcgggtcacatgcgctcgcacactggcgtaaaaccatatgaatgtgaggtgtgcttgaaacgttttgccggaagtagcAGCCTTAAGTGTCATCGATTAAAATCACACAAAGACTATGAGACTGCCGAAAATGCTACAGATGTTGCAATTGAAGGTGAAGATGAAGAAAAGCTAGATACTGGCATTAGTGTTTTGGAAATCGTAAATATTACCGAAATAAATACGCCAGAAGAGAATTCAACCAAGATAATGTACGCAGAAAACAATTGA
Protein Sequence: MSAVEYTSYDSVCRGCLGKKGEMRPLFGTCLDAMLMNVAEIEVHKGDGYPELMCVQCVLQVSRAFTFKKQCQRSDNMLRKFKENKKTEESITETVTQSESTIIEDPDALLNSKKKIARRYFIVQPQAAEMKQSHTEEQSQPIQELQQSNDFQQIIEPISIISDTKHNILDYNMQGNVQGSVEVEFKDPSNGEKRYLIVQRLPMMKNEYGGDTAECNDQDIQIVEECDGLQLIGGFHENQIIICEDELLKDNDADDDGGQNKTINLHGISFTNEDMGALPLSTELITEHFDVYSNDEVSNNDHDSMMVAINNHANDIFSSDIENEELRSMCIECNLDFDSLEDLKLHQEQVHSVEIDKQNQEEQFTEQISDLDGNKFKCQYKCNVCDKIFAESKILRRHLKIHSLNKPHVCGICYMSFAESSNLTKHTKKHTGELRNVIGKPNLCSFCGKRFKWASSLSKHMKHHTRHKILNCPHCPKYYVEARSLNIHIRSHTGEKPFVCTVCNKGFTQLGNLEKHTRVHTGEKPFICPVCGKGFSQSGYVAIHVRTHTGERPYICTECGKGFAGSNTLAIHKRTHTGERPYPCNTCDKTFARQETAIIHQRTHTGEKPHICHICDRGFTSSGHLSGHMRSHTGVKPYECEVCLKRFAGSSSLKCHRLKSHKDYETAENATDVAIEGEDEEKLDTGISVLEIVNITEINTPEENSTKIMYAENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -