Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010055689.1:469-2385[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.7 1.1e+02 4.4 1.1 1 20 24 43 24 47 0.79

2 16 8.3e-05 0.0051 18.0 2.1 1 23 135 158 135 158 0.97

3 16 8.7e-06 0.00054 21.1 2.6 1 23 168 190 168 190 0.97

4 16 0.041 2.5 9.5 3.5 1 23 207 230 207 230 0.98

5 16 8.9e-06 0.00055 21.1 1.6 1 23 240 262 240 262 0.98

6 16 0.00054 0.033 15.4 1.6 2 23 270 291 269 291 0.95

7 16 5e-06 0.0003 21.9 1.0 1 23 301 324 301 324 0.98

8 16 0.33 20 6.7 7.9 1 23 343 366 343 366 0.98

9 16 0.00031 0.019 16.2 0.5 1 23 385 407 385 407 0.96

10 16 0.0022 0.14 13.5 0.8 1 23 418 441 418 441 0.98

11 16 1.3e-06 8.1e-05 23.7 3.5 1 23 457 479 457 479 0.99

12 16 0.0045 0.28 12.5 0.7 6 23 496 513 493 513 0.98

13 16 1.7e-07 1e-05 26.5 0.7 1 23 519 541 519 541 0.98

14 16 0.036 2.2 9.7 1.4 1 23 547 570 547 570 0.98

15 16 0.67 41 5.7 2.4 1 23 577 599 577 599 0.97

16 16 0.00075 0.046 15.0 1.2 1 23 605 627 605 627 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.7	1.1e+02	4.4	1.1	1	20	24	43	24	47	0.79
2	16	8.3e-05	0.0051	18.0	2.1	1	23	135	158	135	158	0.97
3	16	8.7e-06	0.00054	21.1	2.6	1	23	168	190	168	190	0.97
4	16	0.041	2.5	9.5	3.5	1	23	207	230	207	230	0.98
5	16	8.9e-06	0.00055	21.1	1.6	1	23	240	262	240	262	0.98
6	16	0.00054	0.033	15.4	1.6	2	23	270	291	269	291	0.95
7	16	5e-06	0.0003	21.9	1.0	1	23	301	324	301	324	0.98
8	16	0.33	20	6.7	7.9	1	23	343	366	343	366	0.98
9	16	0.00031	0.019	16.2	0.5	1	23	385	407	385	407	0.96
10	16	0.0022	0.14	13.5	0.8	1	23	418	441	418	441	0.98
11	16	1.3e-06	8.1e-05	23.7	3.5	1	23	457	479	457	479	0.99
12	16	0.0045	0.28	12.5	0.7	6	23	496	513	493	513	0.98
13	16	1.7e-07	1e-05	26.5	0.7	1	23	519	541	519	541	0.98
14	16	0.036	2.2	9.7	1.4	1	23	547	570	547	570	0.98
15	16	0.67	41	5.7	2.4	1	23	577	599	577	599	0.97
16	16	0.00075	0.046	15.0	1.2	1	23	605	627	605	627	0.97

Sequence Information

Coding Sequence: ATGGATCTAACAACAAATCATTCAAAATGTGCGGAAATATTCCGATGTAACGATACGTGTCGGTATGCATTTGTTTGCTTTCATTGTGGCCAATATTTTGAATTGTTTGCTGATATTTCCGATCACATTGGGCAAGTTCATAATAATATTTACACAACTACCAATCAATCCGTCGAATGTGCATCGGAAGAAGAGATTAAAACGGAAATAGTTAAAGTATACAATTGCGGCGAATCTGACCCACTAGATTTAGATGAATGTTCCCAGGTAAATTTTGCAGGTAAAAGGAGAGATCAGGATAACTTGGATACTGGTATAATTCCAGACTGTTCAGAAGAGAATACAGATAAAAGTGACAATTTGTCGCATTGCTTGCCTAATGCAAGCAGTTCAGAGAAACCATTCAAATGTAACCAGTGTGACCGTTCGTATAATAAGAAAAGATACCTTGGCGATCACATGCGAAACATACATGCAATTTTTGCGTCTACACAATTTGACTTTATCTGTGATGTCTGCAATAGGTCCTTCAATCGTAAAGTGAACCTTTTGCATCATTTAAAAAATCACCGAACAGAACAATGTGCTGTGTCTATTGCAAGCAATCAAAAGAAACCATTCAAATGTAACATTTGTATGTGTTCCTATAGTAAGAAAAGATACCTTGGCGATCATATTCGAATTAAACATTCCATTTCAGAACCTAAGCTATTGCTTTTTATCTGTGATATTTGCAGCAGATCCTTTAATCGTAAAGTAAACCTGTTGAATCATTTCAAAACGCATCGTTCGCCAAAAACCAATTTACAATGCTCGATGTGTAACGAGATATTTAGCTCAAAACAATTATTAAATCAACATTTACATGATCATGTAACAAAGGAAGATAAGGAAATTAAATTTAAATGTACAGATTGTGATGAAACTTACAATTCGAGAAAGGACCTACTAAACCATTTACGATCAGAACATTTAAAATGTTTGGAATCAAAACACGCTCGTACTTTAGTTGCTTCAGCCGAAACATTTAAATGTGATCATTGTGAATGTAGCTACTTGAAACGGAAATCATTGAATCAGCACTTACGCAAAAAACATGACATTTTTCAAAATGAAAATGCCGTAACCGAAAGAAACAGaaagaaagtccaattcaaatgtgataattgtggcaaacaatttgacagcaaattggacattcaaaaacatttagctgaacacGCGCTTCGCCAGACAAATGATGATAAACCATTTAAATGTACACTTTGCGAACGAAGCTATAGTTCAAGCAAAATATTAGGCGATCATATGCGTAGAGGACATTTTATATTCCAGAGTACGAAAAACGAAAGCGGACAATCGTTGGGCTTTAAATGCGACCATTGTGGCAAAGCATTTGCTAATCAACGCACATTCTTAAAACATTTACGATCGCACTCGGCTAACGTTGATGATCAAAATGTAAAAAGCTTTCACTGCATTCCATGTGATCTTTCGTTTACGAAGCAACGTCAATATAACaaacacatgataagacatacagacgtaaagccgttctcttgtgatttgtgcggccgaagtttccgggacaaaagcacgttacaagcacacgaacggatgcacagtggcgaaaagccatatcaatgctttaggtgtggcgatcaattTTACTCTGTCACAAGCATGAACAATCACATCCGGCGGCTGCATAAAGATATCGAAAAAAAATACAAATGTGAGACGTGTGCAATGAAATTCCACACCGAATACGGCAAGAAGGTTCACGAAAAAATTCACAACGGCCAACTGCCATTCGAATGCACTTTGTGCGATGAAAGGTTTGAGCTGAAAAAGACGTTGCGAAATCATCGACTGTTACATTTTGAAAATGATACGATGGAAGTTATTATACGATAA
Protein Sequence: MDLTTNHSKCAEIFRCNDTCRYAFVCFHCGQYFELFADISDHIGQVHNNIYTTTNQSVECASEEEIKTEIVKVYNCGESDPLDLDECSQVNFAGKRRDQDNLDTGIIPDCSEENTDKSDNLSHCLPNASSSEKPFKCNQCDRSYNKKRYLGDHMRNIHAIFASTQFDFICDVCNRSFNRKVNLLHHLKNHRTEQCAVSIASNQKKPFKCNICMCSYSKKRYLGDHIRIKHSISEPKLLLFICDICSRSFNRKVNLLNHFKTHRSPKTNLQCSMCNEIFSSKQLLNQHLHDHVTKEDKEIKFKCTDCDETYNSRKDLLNHLRSEHLKCLESKHARTLVASAETFKCDHCECSYLKRKSLNQHLRKKHDIFQNENAVTERNRKKVQFKCDNCGKQFDSKLDIQKHLAEHALRQTNDDKPFKCTLCERSYSSSKILGDHMRRGHFIFQSTKNESGQSLGFKCDHCGKAFANQRTFLKHLRSHSANVDDQNVKSFHCIPCDLSFTKQRQYNKHMIRHTDVKPFSCDLCGRSFRDKSTLQAHERMHSGEKPYQCFRCGDQFYSVTSMNNHIRRLHKDIEKKYKCETCAMKFHTEYGKKVHEKIHNGQLPFECTLCDERFELKKTLRNHRLLHFENDTMEVIIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -