Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010067604.1:1-2650[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.019 1.1 10.6 1.3 2 23 166 187 165 187 0.97

2 15 5.8e-06 0.00036 21.6 1.0 1 23 194 216 194 216 0.99

3 15 2e-05 0.0012 19.9 1.6 1 23 221 244 221 244 0.97

4 15 3.9e-05 0.0024 19.0 0.1 1 23 263 285 263 285 0.98

5 15 2.4e-05 0.0015 19.7 3.3 1 23 293 315 293 315 0.98

6 15 0.00013 0.0079 17.4 5.9 1 23 321 343 321 343 0.97

7 15 0.01 0.64 11.4 6.1 1 23 349 371 349 371 0.99

8 15 0.00088 0.054 14.8 0.9 1 23 404 426 404 426 0.97

9 15 3e-05 0.0019 19.4 0.9 3 23 434 454 434 454 0.96

10 15 0.00045 0.028 15.7 1.3 2 23 460 482 459 482 0.94

11 15 0.0004 0.025 15.8 0.5 2 23 491 512 490 512 0.97

12 15 9.7e-05 0.006 17.8 0.5 1 23 520 542 520 542 0.92

13 15 0.005 0.31 12.4 0.8 1 23 548 570 548 570 0.92

14 15 3.6e-06 0.00022 22.3 4.9 1 23 576 598 576 598 0.98

15 15 2.3 1.4e+02 4.0 2.5 1 17 621 637 621 643 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.019	1.1	10.6	1.3	2	23	166	187	165	187	0.97
2	15	5.8e-06	0.00036	21.6	1.0	1	23	194	216	194	216	0.99
3	15	2e-05	0.0012	19.9	1.6	1	23	221	244	221	244	0.97
4	15	3.9e-05	0.0024	19.0	0.1	1	23	263	285	263	285	0.98
5	15	2.4e-05	0.0015	19.7	3.3	1	23	293	315	293	315	0.98
6	15	0.00013	0.0079	17.4	5.9	1	23	321	343	321	343	0.97
7	15	0.01	0.64	11.4	6.1	1	23	349	371	349	371	0.99
8	15	0.00088	0.054	14.8	0.9	1	23	404	426	404	426	0.97
9	15	3e-05	0.0019	19.4	0.9	3	23	434	454	434	454	0.96
10	15	0.00045	0.028	15.7	1.3	2	23	460	482	459	482	0.94
11	15	0.0004	0.025	15.8	0.5	2	23	491	512	490	512	0.97
12	15	9.7e-05	0.006	17.8	0.5	1	23	520	542	520	542	0.92
13	15	0.005	0.31	12.4	0.8	1	23	548	570	548	570	0.92
14	15	3.6e-06	0.00022	22.3	4.9	1	23	576	598	576	598	0.98
15	15	2.3	1.4e+02	4.0	2.5	1	17	621	637	621	643	0.87

Sequence Information

Coding Sequence: ATGGAAGAGACACAGGCAACGGTGAGTGCGGAAATTTTCCAAACGGATCTGATAATAAAAGATGAAGTGCAAGTGGAGCAGCAGCAGGATGTATACAAAAATTGTGATGACGCTGCTGGTGCGGCTGTTGCTTCTTTGCTAGCCGCTGAAGAGTTGGCCGACAATCAAATGTTAATTGAGGAATTTCCTGCAGATTCAATGATTGAGGAGGAGCAGGAGGACGATGACGATGGTTTCGATTTAGATAGTGATATGTGTTTGATAAAATTTAAAGATGCTGAAATTAGTGTAGACGGTATGCGGGTGGAATCGGAAATCCCTGAAGTGGCCTTAGTAGAGCAAGAAATTAAATTAGAGCCGGAAATGAATATTGACGATTCAAAGTTAATATCGGATAGTGCAGAGTCCCAAAATGATTTCATTGTTGATGAGATCAAAGTGGAAGAGGAAAATGTTGACGAGGCAAACACCTCAAATGAAGCGGACGGGTTGATAAAGTGTTTTTACTGTAGGGCTGTTTGTGCAAGTCAAAGTGACTATGATGCCCACTTGAAACGACACGAAGAAGAAGGCTCATCGTTCAAATGTGCAAAATGCTCTAAAGAATTCGCGACATTGGCCAAACTGAATCGACACATGAAAATTCACAGCGGTCAAATGTACGAGTGTGAACAATGCAACAAAAAGTTCAATTCTCCGTCGTCCAAGAGACGTCATCTGAAAGTGCTGCACGGCATTGTGGGCAACAGCAACGGTTCAAACAATAACATTGCAGAAATCTACAAATTTAAATGCGCCACATGCCTAAAGGTATTCAAGACTGCTGAGGAATTGGAGGCACATGCTCAGACGCACGTCGGTCAGGCCGAGGTATCATTTCAATGTAATGTATGTGAGCGAGTTTTTCAAAGTAATTAtcatttgcagaaccatctgaagcaacacgatgcccagaaaatgcacgaatgtttggtgtgcagtaagaaatttcgtacttcgtcgcacctcaaaacgcacagccgcgtgcatacgggcgagaaaccatacgagtgcagctattgttttaaacgttttttctgttcgtcgtcgctgtatcggcacctacgcatccacaccggcgatgccaaaccgtatagatgtgattgtggtgagatatttggcatcttggccgaaattaacaaacacTACGCGGAAAGTTGTGACCGATCCTTTCAATGTGAAGAATGTGAAATGAAATTCAAGACTAAATCCGATGTGGACGACCATTTCAAGGTTCATCTAACTGGTGAATCGATTGGTtgcgataaatgcgacaagacattcgcaacacaatcgcaattcaagattcacatcggaaatcacgattcgattttagttacgtgcgacatttgtaggaaacattttgcagcgtcggagaacctgaaaaaacacatcacctacacgcataactatgacatcaACGATCAAATGAAGTGTCCCGACTGTTCAAGAGTATTTACACGCATTTTGGATTATAAAAATCATCTTCAACTGCACAGCACTGTGGAACTGGTGCCCTTTAGCTGTACAGTTTGTCCCAAAACATTTCAATCTCAGTCTGAGTTACGGTTGCACAATGCCGAGCACACGGCCGAAAAACAATTCGCATGTTTAATATGCGGCAAAAAGTATTACAATGAAAGTAACTTGAAGTTTCACGAACAACTGCACACGGGCAAGAAAATGCATCAGTGCAAACAATGCGGAAAAAGTTTTAAATTTGTTCAGAATCTAGAGAAGCACATGAAGCGTCACGAGACGAAAGTCAAGAAGGTCAAAAAAACGTACCTAAATGAGAATGGCGAAAAGCGCGAAAAGATCTACGAATGTGATATTTGTTTGAAGAAATTTATATTTAAAAAATCCGTTCAGAAATGCATCAAGAAACACGAGGCCCAGTCTAGAATGGAGATACAAAATCTGATCAAGAAAACCTGGAACAATAATTCCAAAACTCAATATAAAATTCACATTGAAAGTTCAATGCTACGGGCAAATAATGCCAAAAATATCTGCAACAACAACTCTTCCTACTACAAACATCAATGGCCCACAAATGAGTCGGCTTCCTTTCTGAGCAGTTCATCGTCACAAATGCAATATTTTAACTATCCGGTTGGcaacagcattatcgtcgatagtccaatgttattatcgtcatcgttatcaacaacatcctcaacatcCTCTACTTCCTCCACAACGTCTGCCACCTATGAGGTGGTGCCGGTTTCGTCTTCCAACGGCAACT
Protein Sequence: MEETQATVSAEIFQTDLIIKDEVQVEQQQDVYKNCDDAAGAAVASLLAAEELADNQMLIEEFPADSMIEEEQEDDDDGFDLDSDMCLIKFKDAEISVDGMRVESEIPEVALVEQEIKLEPEMNIDDSKLISDSAESQNDFIVDEIKVEEENVDEANTSNEADGLIKCFYCRAVCASQSDYDAHLKRHEEEGSSFKCAKCSKEFATLAKLNRHMKIHSGQMYECEQCNKKFNSPSSKRRHLKVLHGIVGNSNGSNNNIAEIYKFKCATCLKVFKTAEELEAHAQTHVGQAEVSFQCNVCERVFQSNYHLQNHLKQHDAQKMHECLVCSKKFRTSSHLKTHSRVHTGEKPYECSYCFKRFFCSSSLYRHLRIHTGDAKPYRCDCGEIFGILAEINKHYAESCDRSFQCEECEMKFKTKSDVDDHFKVHLTGESIGCDKCDKTFATQSQFKIHIGNHDSILVTCDICRKHFAASENLKKHITYTHNYDINDQMKCPDCSRVFTRILDYKNHLQLHSTVELVPFSCTVCPKTFQSQSELRLHNAEHTAEKQFACLICGKKYYNESNLKFHEQLHTGKKMHQCKQCGKSFKFVQNLEKHMKRHETKVKKVKKTYLNENGEKREKIYECDICLKKFIFKKSVQKCIKKHEAQSRMEIQNLIKKTWNNNSKTQYKIHIESSMLRANNAKNICNNNSSYYKHQWPTNESASFLSSSSSQMQYFNYPVGNSIIVDSPMLLSSSLSTTSSTSSTSSTTSATYEVVPVSSSNGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -