Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010041271.1:574-5704[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.031 1.9 9.9 2.1 1 23 48 71 48 71 0.97

2 27 9e-05 0.0055 17.9 0.1 3 23 78 98 77 98 0.98

3 27 0.00064 0.039 15.2 3.2 1 23 104 126 104 126 0.98

4 27 0.00041 0.025 15.8 3.5 1 23 292 315 292 315 0.96

5 27 1.7e-05 0.0011 20.2 1.1 1 23 326 349 326 349 0.98

6 27 0.58 36 5.9 1.9 1 20 353 372 353 374 0.94

7 27 3e-05 0.0018 19.4 0.3 1 23 475 498 475 498 0.96

8 27 9.1 5.6e+02 2.1 2.7 1 21 502 522 502 523 0.93

9 27 0.0032 0.2 13.0 0.1 1 23 637 660 637 660 0.95

10 27 8.4 5.2e+02 2.2 0.8 1 20 664 683 664 685 0.90

11 27 0.00068 0.042 15.1 0.3 1 23 694 717 694 717 0.98

12 27 0.028 1.7 10.0 0.3 1 23 809 834 809 834 0.96

13 27 4.5 2.7e+02 3.1 0.2 1 8 869 876 869 883 0.93

14 27 0.006 0.37 12.2 3.2 1 23 895 918 895 918 0.91

15 27 0.29 18 6.9 7.9 1 19 956 974 956 979 0.92

16 27 0.0021 0.13 13.6 0.8 1 23 991 1014 991 1014 0.96

17 27 8.6 5.3e+02 2.2 4.4 1 21 1018 1038 1018 1039 0.94

18 27 0.024 1.4 10.3 0.7 2 23 1051 1072 1050 1072 0.95

19 27 0.0065 0.4 12.0 6.3 1 23 1078 1101 1078 1101 0.96

20 27 4.1e-05 0.0025 19.0 4.6 1 23 1107 1129 1107 1129 0.97

21 27 0.00016 0.01 17.1 1.4 1 23 1135 1157 1135 1157 0.98

22 27 0.00083 0.051 14.9 3.0 1 23 1162 1184 1162 1184 0.97

23 27 1.6e-06 9.5e-05 23.4 1.6 1 23 1192 1214 1192 1214 0.97

24 27 0.00011 0.0067 17.6 0.4 3 23 1222 1242 1220 1242 0.97

25 27 5.6e-06 0.00034 21.7 1.7 1 23 1248 1270 1248 1270 0.98

26 27 1.6e-06 9.7e-05 23.4 0.7 1 23 1276 1298 1276 1298 0.99

27 27 0.66 40 5.7 8.5 1 23 1304 1326 1304 1326 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.031	1.9	9.9	2.1	1	23	48	71	48	71	0.97
2	27	9e-05	0.0055	17.9	0.1	3	23	78	98	77	98	0.98
3	27	0.00064	0.039	15.2	3.2	1	23	104	126	104	126	0.98
4	27	0.00041	0.025	15.8	3.5	1	23	292	315	292	315	0.96
5	27	1.7e-05	0.0011	20.2	1.1	1	23	326	349	326	349	0.98
6	27	0.58	36	5.9	1.9	1	20	353	372	353	374	0.94
7	27	3e-05	0.0018	19.4	0.3	1	23	475	498	475	498	0.96
8	27	9.1	5.6e+02	2.1	2.7	1	21	502	522	502	523	0.93
9	27	0.0032	0.2	13.0	0.1	1	23	637	660	637	660	0.95
10	27	8.4	5.2e+02	2.2	0.8	1	20	664	683	664	685	0.90
11	27	0.00068	0.042	15.1	0.3	1	23	694	717	694	717	0.98
12	27	0.028	1.7	10.0	0.3	1	23	809	834	809	834	0.96
13	27	4.5	2.7e+02	3.1	0.2	1	8	869	876	869	883	0.93
14	27	0.006	0.37	12.2	3.2	1	23	895	918	895	918	0.91
15	27	0.29	18	6.9	7.9	1	19	956	974	956	979	0.92
16	27	0.0021	0.13	13.6	0.8	1	23	991	1014	991	1014	0.96
17	27	8.6	5.3e+02	2.2	4.4	1	21	1018	1038	1018	1039	0.94
18	27	0.024	1.4	10.3	0.7	2	23	1051	1072	1050	1072	0.95
19	27	0.0065	0.4	12.0	6.3	1	23	1078	1101	1078	1101	0.96
20	27	4.1e-05	0.0025	19.0	4.6	1	23	1107	1129	1107	1129	0.97
21	27	0.00016	0.01	17.1	1.4	1	23	1135	1157	1135	1157	0.98
22	27	0.00083	0.051	14.9	3.0	1	23	1162	1184	1162	1184	0.97
23	27	1.6e-06	9.5e-05	23.4	1.6	1	23	1192	1214	1192	1214	0.97
24	27	0.00011	0.0067	17.6	0.4	3	23	1222	1242	1220	1242	0.97
25	27	5.6e-06	0.00034	21.7	1.7	1	23	1248	1270	1248	1270	0.98
26	27	1.6e-06	9.7e-05	23.4	0.7	1	23	1276	1298	1276	1298	0.99
27	27	0.66	40	5.7	8.5	1	23	1304	1326	1304	1326	0.95

Sequence Information

Coding Sequence: ATGGCCTCAACATGCACTGTCACAACAATTAATTCCGACAAAAGAATAAGGCCGGACATAAATTTAGATCAATTGAATGCCAATGATGAAGAACGCCCGCAGGCTTCAGGCAATAAAAAACCAAAATCTTACATAAAGCCGCATAAGTGTACCCAGTGTAAAGTTAATTTACGTACAAGTGAACAATTGGAGATGCACGTTAAAGTTAAGCACAACAATGAATTGTTATTGtgtgatgtttgtgataagacttttacgactgttGAAGAGCTATTGGTACATTTACGCTTGCATGGCGAACAGAAAATGTTTAAATGTTCTTATTGTGATTTAGAGTTTCAAGAACATTCATACCTAAAATCGCACATTCGTTTGCATAGCCAGTTGGCGTATAAGCCGAAATCGGTCAATGTGTGCAGCGAAATTTTGGATATTGATGATGAGCGAAATTATCTCAAAGAAGGTGAGGAATACGTACCAACGAAGAAAAGTAAAGGAAAGCCTCAAAAGAGGAAAACTAATTACGACTCATCAAGTGATAGTTCTTCAGATGAAACACTTCAAACTATATGTAACAGAAATAAATCCCAAGGAAATATCAAACAGTCTGGGAATAATAATTGTCCGACTAAACATGAAAGTAAAACCAAATCGGATAATCTTGCTGACAGTAAAGATGCTCTAAAATCTAATGTAGAAGATGAAAAATCTAATTTCATTTCTAACGATGGCGATACAATAGATATTGAAAATGTTGCCAAAATAGACCCTGAGATAAACAATTTAATGGAGAATAAGGCAGACATTACGATTAAGAAAGAATCTGAACCCATCAACTCTTTGAATAATGATGGTATGAACGATAAAAAACGATTTCAATGTTCTCAATGTCCCACCACTTATTCACGACAATATTTTCTCCGTAAGCACTATAACGAAAAACATTCAGGCAATGAGACGGTGTGTGACCAAAAATTTAAATGTTCTCTTTGTCCTATGGCATTTACCCGAAACAATAATCTACAATATCACGTGCGAAAGCTGCACACTCGTAATTTTGAATGCACTAAATGCAAGTTAGATTGTGTTGATGCCGTTAGCTTTAAAAAGCACAAGTCCAGTTGCTCCAAGGCATCCAAAATAAATGACGAAAAAGATGACGATTTTTTCTCTAATGAGCTCGGACGGTGTGATTATGAGTGGGATGATGATGATGACGGCACCAAGGTTGAAGAAATTGAAAAAAATATTGAAATAGATAATAAAAAAGCTAATTCCGCTAATGATGTTAACATAGAATCAAAATCAAATGATATTGAATTGGGAACAAATGAACCCATATTGGAAAATACACATAACGATATTACAAATAACTTTGATTCGCTATTAGAAGTTTTAAAAGAATCAATTTTACCACCTTTTTATAAATGTCCTGATTGCCCGGTGACATATAAACGAAAAAATAATTTAGACAATCACATTGTTAAGGTTCACAGCCGTAACTATGTATGCACAAAGTGTACGTTTAATTGCATTGATTATGAGGGTTATAGAATGCataagaagagatgtaaaaatttgcatctgcccacatctgCTTTGGCAAAACACATGAAAAAACATACTGACATTCCGTTAGACGATTCTTCGAAAACTGACATCGTTGCATTCGACAAAGTCTTCATAAAAGTTGACGAAGACTTTGATGAAAATGTTTGTGATGTTTATAATAAAGATAATGATTTTTATGATGCTCTAAATGATGAGAATACCCAAATTATTAAGGAAGAAGAAATATTAATCGATGACAATGAATATGCAGAGGATAGAAAATTGCCGATAGTTATTAGCATTAATGATATTGAAAAGTACATTGAAACTGTGCAAAAACCAATTTTACCTTCAGAATTTCAATGTCCCCAATGTCCGTTATCGTATGGCCGAAAGCCAAATTTAGACTATCACATTGTTAAGGTTCATACACACGATTTTGTGTGTAAAATATGCGAATTGGACTGCATTGATTATCTGAGTTATAAACAGCATAAAGCAAATTGTTACGAAAGTCAAAAGCCCGCCTATAAATGCAAATTATGTGACCGAGTTTTAGCCAAGAGATCGGCGGTCAGAGCGCACATCAATAGGATGCATATTTCTAGTAATACTGAAGCATCGGTGGGCATTGCATTTGATGAAGAATTGATAAAAAGTGATACAGAAATTCAATCACATGACAAATCGGATAGTCAGCTGAATGACGATGTGGATGCCACAGTTGATGAAAAGTTTAAAATGGAAAATTTGAAGAAACGTTTAGATAGAAAAGCCATCTCATCTAAAGTAAATTATATATATGTAAATGAGAACTATGACATTGAGCAATTTATGGAAATTTTAAAAGATCCAATTTTAAAACCACAGAAATTTCAATGTCCTAAATGCCCGTTTAAATTAACATATACACGGGAGGCTGACTTGCAATATCACATTATGAACGTTCACACTCATAATTATGAATGTACAAAATGCAAATTTGATTGCATTGACTTCAACGGTTATAAGAAACACAAACGATATTGTCGCAACTCCAAACCGGTGCTATTGTATCGATGTAAGATATGTGACAAATTATTGGGAAATCGTAtaaagtttcacattcgtaaacataccggaaatagaccttacaaatgttcgatgtgtaaCAGTTCCTTTGCAGATAAATATCATTTTCAAATTCATTTCAGTGCTAACCATACGGGCAAGTCATTTGAAATAGAAACATTAGAGAAAAATACAGACGAAATTGATTCAATAAGAGAAGAAGACAAGAAAATGGAAAACAATTTAGAAAAATCCACTGATCTATTTCAATGTTCTCAATGTCCATCATCGTATACACATAAACACAATCTGCTCAGACATTGTAAGGATAAACATTCCGAACAAAAAACCCCAATATATGAGAACAGGTTTAAATGTGGTTATTGTTCTGCTACATATACTAAAAATCGTGCTTTAGAACGTCATAATCAGATGGTTCATATTCAAAATTTCATATGTTCTGTATGTAATTTGGATTGCGTTAATTTTAGTAGATTTAAGAAGCACCGAAAGCATTGTAATGAAGGTAGAGAAATAGCTAAGCGACAACAATGTTTATTTTGTAATAAAACGTATCGCTTCCAAGCTGATTTAGATAATCATGAAAATGGTCATACGAATAAACGTCCATATACATGTGATTATTGCTTGAAAAGCTATCGTTCAAAACATTGtctgagatcgcatcttttaaatttacactctggattgtcaccacataaatgtgacatatgcgacaagagctttgtgagtaagggccatttgagtcaacacaaattaaaacactcggacctaaaaccgtttccatgtaatgtttgtaacaaatcgctaaagtcgaaaggacgtttgtacaatcatatgaaatcacatcaagaggattcttacaaatgttcacattgtggcaaaggatgtaaatcgctggctgccttgcaggatcatgagactagacatcttgaaaatgttgataaaaaattcgcatgtaaggtgtgtggaaaatcgtttgttcagaaaatgcagttagcaaatcatatgcatacacataccggtgaacgaccttatggatgtacgctttgttcgtcacgatttgcagataaaagtaatctatcggctcacatgcgtattcatactggtttaaaaccgtataaatgttccgtttgtaacaaggaattctcacaattgagttcgctaaacagtcacaagaaaattcacataacatttaagccatttaagtgtgaatattgcacaaaagatttcgccacaaatgaaaatttaatttcacatTTAAGAGTGCACGGCGACATACGAATGTTTAAATGCAGCGTTTGTGGCAAAGAGTATGAGCAATTGTGTCATTTTAAATCTCATTGTCGCCTTCACTACGGAAATGAAGTTAAGGATAATGATAGAAATATTAGTTTAGAGGATTGGAGTAAATTTAAATTAAATGCAACCGAAACAAAAGTAAATGCAAATTTCGTTGATACCGCGAACTATACACAAACAATCGATCTATTAAAAAATGTCAACCCACAAGCATATATTGAATCCAACTGTAACTAA
Protein Sequence: MASTCTVTTINSDKRIRPDINLDQLNANDEERPQASGNKKPKSYIKPHKCTQCKVNLRTSEQLEMHVKVKHNNELLLCDVCDKTFTTVEELLVHLRLHGEQKMFKCSYCDLEFQEHSYLKSHIRLHSQLAYKPKSVNVCSEILDIDDERNYLKEGEEYVPTKKSKGKPQKRKTNYDSSSDSSSDETLQTICNRNKSQGNIKQSGNNNCPTKHESKTKSDNLADSKDALKSNVEDEKSNFISNDGDTIDIENVAKIDPEINNLMENKADITIKKESEPINSLNNDGMNDKKRFQCSQCPTTYSRQYFLRKHYNEKHSGNETVCDQKFKCSLCPMAFTRNNNLQYHVRKLHTRNFECTKCKLDCVDAVSFKKHKSSCSKASKINDEKDDDFFSNELGRCDYEWDDDDDGTKVEEIEKNIEIDNKKANSANDVNIESKSNDIELGTNEPILENTHNDITNNFDSLLEVLKESILPPFYKCPDCPVTYKRKNNLDNHIVKVHSRNYVCTKCTFNCIDYEGYRMHKKRCKNLHLPTSALAKHMKKHTDIPLDDSSKTDIVAFDKVFIKVDEDFDENVCDVYNKDNDFYDALNDENTQIIKEEEILIDDNEYAEDRKLPIVISINDIEKYIETVQKPILPSEFQCPQCPLSYGRKPNLDYHIVKVHTHDFVCKICELDCIDYLSYKQHKANCYESQKPAYKCKLCDRVLAKRSAVRAHINRMHISSNTEASVGIAFDEELIKSDTEIQSHDKSDSQLNDDVDATVDEKFKMENLKKRLDRKAISSKVNYIYVNENYDIEQFMEILKDPILKPQKFQCPKCPFKLTYTREADLQYHIMNVHTHNYECTKCKFDCIDFNGYKKHKRYCRNSKPVLLYRCKICDKLLGNRIKFHIRKHTGNRPYKCSMCNSSFADKYHFQIHFSANHTGKSFEIETLEKNTDEIDSIREEDKKMENNLEKSTDLFQCSQCPSSYTHKHNLLRHCKDKHSEQKTPIYENRFKCGYCSATYTKNRALERHNQMVHIQNFICSVCNLDCVNFSRFKKHRKHCNEGREIAKRQQCLFCNKTYRFQADLDNHENGHTNKRPYTCDYCLKSYRSKHCLRSHLLNLHSGLSPHKCDICDKSFVSKGHLSQHKLKHSDLKPFPCNVCNKSLKSKGRLYNHMKSHQEDSYKCSHCGKGCKSLAALQDHETRHLENVDKKFACKVCGKSFVQKMQLANHMHTHTGERPYGCTLCSSRFADKSNLSAHMRIHTGLKPYKCSVCNKEFSQLSSLNSHKKIHITFKPFKCEYCTKDFATNENLISHLRVHGDIRMFKCSVCGKEYEQLCHFKSHCRLHYGNEVKDNDRNISLEDWSKFKLNATETKVNANFVDTANYTQTIDLLKNVNPQAYIESNCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -