Dfer013087.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- ZFX
- Assembly
- GCA_027564275.1
- Location
- JANSTW010063231.1:21360-25547[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0023 0.14 13.5 3.1 2 23 82 103 81 103 0.97 2 21 0.0019 0.12 13.7 0.6 1 23 109 131 109 131 0.97 3 21 9.5e-06 0.00059 21.0 0.2 1 23 136 158 136 158 0.98 4 21 0.88 54 5.3 2.8 1 23 164 187 164 187 0.96 5 21 0.0004 0.024 15.9 2.7 2 23 214 235 213 235 0.97 6 21 1.4e-05 0.00084 20.5 1.1 1 23 241 263 241 263 0.99 7 21 1.1e-05 0.00065 20.8 1.2 1 23 269 292 269 292 0.97 8 21 0.0057 0.35 12.2 3.2 1 23 301 324 301 324 0.97 9 21 1.2e-07 7.3e-06 27.0 0.3 1 23 422 444 422 444 0.98 10 21 3e-06 0.00018 22.5 1.4 1 23 450 472 450 472 0.99 11 21 0.00011 0.007 17.6 2.8 1 23 479 502 479 502 0.97 12 21 0.28 17 6.9 2.2 2 23 507 528 506 529 0.95 13 21 2e-05 0.0012 19.9 5.0 1 23 591 613 591 613 0.95 14 21 1.2e-05 0.00076 20.6 4.6 1 23 619 641 619 641 0.97 15 21 0.006 0.37 12.1 2.7 1 23 647 669 647 669 0.96 16 21 0.43 26 6.3 4.1 2 23 676 697 675 697 0.96 17 21 4.6e-05 0.0028 18.8 3.4 1 23 894 916 894 916 0.97 18 21 0.17 10 7.6 8.1 1 23 922 944 922 944 0.99 19 21 2.1e-05 0.0013 19.9 0.3 2 23 952 973 951 973 0.97 20 21 0.00086 0.053 14.8 2.2 1 23 979 1001 979 1001 0.98 21 21 0.0017 0.11 13.9 0.6 1 23 1069 1091 1069 1091 0.96
Sequence Information
- Coding Sequence
- ATGACCAACAATTTCGATAATTTTGAAATGTTTACCGAAGATTTGGACATAAATGCAATAGAATGCATAACGTCTGATGATTTTACACCAGAACAATCGCAAAGCAAGAATAAAGCCGAAGAATTCGAATCCAAACACTTTGATGTAGTCTACCGGAAGCCAGGGGTAAGACATTTGAAATTTAAATGTACTAAAAAATCTGCTGTTCAATTAAAGAAAAGTGTGATCCGGAAAGAAGCGAAAAAATGTGATTTATGCCACAGGACGTTCACGACAGATGCAAAATTAGCCAAACATAAAAATGTGCATAACTATGAGAAACCACACAAATGTGGTTTGTGTTCGGAAACGTTTAATGTTTTGGAAAATTTAACGCTGCACATTTCATTGCACAATGGACAGCCGTTTCGATGTCCTCAGTGCGGCAAAATATTCAGTCGATTGGCCAGTCTGGACGGCCACATTAAGTCACACTTTAAAAGTGAATATTTTGTGTGCACTCATTGTTCGGATATGTTTCACTATGAGATAAGTCTGCGCGAACACATTGCCAAATACCATCCAACGGAAGGATATAAAATGAGGGAGCAACGTGAACAGATGATAACGAATCGTCGAAACGCCAAACGAGATCCATGGCAGtgcaagttttgtagtaaagtttttgcgaaaaagtgtctacttgaacgtcacgagcgtattcatactggcgtgaaaccatacacatgtgatttgtgtgatcgtgcttttaatcagaaaaataccctggaaacacatcggctaacccatacaggcgatcgttcgtatccatgccaattgtgtccgcaaagttttacacaaaatggaaatttaaaagtgcacatcagTCGGTGTCATACGGCCGCAAAACAACGAGACCAATTCAAGTGTACTCTATGTTCTTGTTCTTTTAAAAAAATTGGCACCCTAAATACTCACATCAGTCGAGTGCATCCGGCCGGAGCCGTATCGAACGACCAAGAACATGATTTTTTCAAGGTAACCGATGTAATGGAACAGCTAACGCAATTAAGCCGAAATGTTCCGGACGATGTTGTTCCTTCGAAATCCATCGTTGAGCATGCCGCTTGGAGTGACACACTTTTAAATAATTTTCCACCTCCGCCAGCACCACCAGACGTCGAATCAATTACTTATTCGGAATTAAAGTTGGCCGAACATACAACTAACGGCAAAATAACTCATCGGCATGTGAGACAGCGTCAAAGAGGCGAACAAAAGTATTACATTTGTTTCTATTGTCCcaaagaatttcgacgaccttccgacttgataagacacattcgcatacatacaggcgagaaaccattcaaatgtgaaaaatgtgatcgacgtttttccgttaaaggctcctatactgtgcacatgcgaatccatgaaaatgaCCTGGCTAACTTCAAATGTACACTTTGCGAAAAATTATTTCGCAATCGATACTCGTTAAATTTGCACATGAAACAAAATCATTTGTCGCCCAGCAAGTGTGAATCTTGCTCACTGGAATTTGATTCAATCGAATCGTATAAACTGCACCGCCGATCACATCATAAAAAAGAACGAAAACCGGTCGATTCAGAACAACAGATTATTATCAAAGGAGACGACAGCATGGACGACATCAGATTGGACCTTCAATTGCAAGAGCCCGTGTTGGTGTTAGACGATAATCGGACGACTGACGGACCTTTTCAAGCGGAAACCGTGCAGCTCAAAACCAGCGATGTACGCAAACATGTTTGCGACATTTGCGGTCAATGTTTTAAGAGAAAAAGCCACCTAATGCAACACGTTGCAAATCATATGGGTCTGAAACCACACCAATGTGGTCATTGTAATAAATCCTTTAGCAGTGCAAGTCTGTTGAATCGTCACACATTATATCATTATGATAATAAACCATTCAAATGTAACAAGTGTACCATGTCATTTCGATCGGCCTACATCCTAAAGCGTCATGCCTACAAACATTCCGATCAACGTAACATAATGTGTCCGTATTGTCGTAGCAAATTTAAATCTAAAATTTCCTGTAAACAACACATGAAACTGCACAAATCTGAACTATTGCAACAGTTGAGCGAACAAATTCAGTCGGGCAATCTATTGATCGATTATCGTCCTACACAATTATTGGCAACAGATGAGGTGGTTGAAACACAGCAAATAAAACCGGTGGTTCATGAAGAGAGTCGACCGGTCACAATAAATAGCAACAATCAAATTTCTGTTATCGAAAATATTCGCTTACCAAGCGAATCGATGATAGTTGCAGAGCCGAATATAGGTGCTCCTGCCGCCGCCAATAATAACATTGATATTGTTGTATTAATTTTGGCGGACAATCAAGAACAACAAACTCTTTCGTTTGAAAATGAGGCGGCGGGTAGTGGCAATTTACTAAATGTAACGGATATTATGAATAATGATTTTATCATTTTGAATACAAACGAAACCATACACATGTTGGATAATCAAACTCAACATCAACTCGTTGGTGAAGCGAATAACTTGGAAACGTCTGAGATTAATAATTATTCGCATCAGCAGGTAGATGAGCCTGAGATATCTGATGAAAGTTCACAGCCAACGGTAGCTTCACGTAAAAAACGTAAACGAAACTCCTGTCCGACAAGAGACAATCACATTTGTTCaatttgtgaaaaaatatttaagaaatctaacgatctacatagacacattcgaattcatacgggcgaaaaaccgtttaaatgcgcagtctgctgcaagtcatttacgctgcggtgtacgctcaagtcgcacaTGAAAAAGCATGAAAGTGTTAAGAAAATGCTGCCATGTCACATCTGCTGGAATGCGTTTGCAACTAAGAGCAGCctaagcgttcacatgcgcattcacagcggcctaaaaccatacaaatgTGACTTTTGTTCGCTAACATTCCGCACATCGGGGCAGAAGCAGAAACATCAAGAGGTTCACGTGCGCGAGAGTCAGCGACGCGGTGGCATTGACCCGAAGCTCGTTAAAACACGCAAAGAAAAGGGAAAACTTTTGCCCATCATGGAATTGGTGAATGCATGCAATGAAACGGTTAATGCAGACAAAAAATCGGTTGCAGCTGACGTAAATAAAGTCCAATTAGACGACAGTGTACCACCAACTACTCAACATAGCAGCAACTACGAGTGTCCACTGTGCGACAAAACATTTGACAACTTCACCTTACGCGAATTGCATGTGCAAAAGCATTCAGGTGCTTATTTCTCTCAATTTACACTACAAGTTGTTTCCCCATTCGCTTAA
- Protein Sequence
- MTNNFDNFEMFTEDLDINAIECITSDDFTPEQSQSKNKAEEFESKHFDVVYRKPGVRHLKFKCTKKSAVQLKKSVIRKEAKKCDLCHRTFTTDAKLAKHKNVHNYEKPHKCGLCSETFNVLENLTLHISLHNGQPFRCPQCGKIFSRLASLDGHIKSHFKSEYFVCTHCSDMFHYEISLREHIAKYHPTEGYKMREQREQMITNRRNAKRDPWQCKFCSKVFAKKCLLERHERIHTGVKPYTCDLCDRAFNQKNTLETHRLTHTGDRSYPCQLCPQSFTQNGNLKVHISRCHTAAKQRDQFKCTLCSCSFKKIGTLNTHISRVHPAGAVSNDQEHDFFKVTDVMEQLTQLSRNVPDDVVPSKSIVEHAAWSDTLLNNFPPPPAPPDVESITYSELKLAEHTTNGKITHRHVRQRQRGEQKYYICFYCPKEFRRPSDLIRHIRIHTGEKPFKCEKCDRRFSVKGSYTVHMRIHENDLANFKCTLCEKLFRNRYSLNLHMKQNHLSPSKCESCSLEFDSIESYKLHRRSHHKKERKPVDSEQQIIIKGDDSMDDIRLDLQLQEPVLVLDDNRTTDGPFQAETVQLKTSDVRKHVCDICGQCFKRKSHLMQHVANHMGLKPHQCGHCNKSFSSASLLNRHTLYHYDNKPFKCNKCTMSFRSAYILKRHAYKHSDQRNIMCPYCRSKFKSKISCKQHMKLHKSELLQQLSEQIQSGNLLIDYRPTQLLATDEVVETQQIKPVVHEESRPVTINSNNQISVIENIRLPSESMIVAEPNIGAPAAANNNIDIVVLILADNQEQQTLSFENEAAGSGNLLNVTDIMNNDFIILNTNETIHMLDNQTQHQLVGEANNLETSEINNYSHQQVDEPEISDESSQPTVASRKKRKRNSCPTRDNHICSICEKIFKKSNDLHRHIRIHTGEKPFKCAVCCKSFTLRCTLKSHMKKHESVKKMLPCHICWNAFATKSSLSVHMRIHSGLKPYKCDFCSLTFRTSGQKQKHQEVHVRESQRRGGIDPKLVKTRKEKGKLLPIMELVNACNETVNADKKSVAADVNKVQLDDSVPPTTQHSSNYECPLCDKTFDNFTLRELHVQKHSGAYFSQFTLQVVSPFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -