Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010047410.1:404-3310[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0073 0.45 11.9 3.7 1 23 64 87 64 87 0.97

2 22 0.00018 0.011 16.9 0.1 2 23 93 114 92 114 0.96

3 22 0.00011 0.0065 17.7 3.1 1 23 120 142 120 142 0.98

4 22 0.0062 0.38 12.1 0.6 1 23 147 169 147 169 0.97

5 22 0.081 5 8.6 2.0 1 23 177 198 177 198 0.97

6 22 3.8e-05 0.0023 19.1 0.6 1 23 204 226 204 226 0.99

7 22 0.00016 0.0099 17.1 2.1 1 23 232 254 232 254 0.98

8 22 0.00021 0.013 16.8 1.3 1 23 260 282 260 282 0.98

9 22 8.5e-05 0.0052 18.0 2.9 1 23 288 310 288 310 0.98

10 22 0.0017 0.11 13.8 0.8 1 23 576 599 576 599 0.94

11 22 0.00019 0.012 16.9 0.8 1 23 612 635 612 635 0.95

12 22 0.82 50 5.4 1.0 1 21 639 659 639 660 0.95

13 22 4.5e-05 0.0028 18.8 1.2 2 23 672 693 671 693 0.97

14 22 1e-06 6.4e-05 24.0 2.6 1 23 699 721 699 721 0.96

15 22 0.0014 0.088 14.1 1.0 1 23 727 750 727 750 0.95

16 22 0.019 1.2 10.6 0.7 1 23 757 779 757 779 0.98

17 22 0.022 1.4 10.4 6.9 1 23 784 806 784 806 0.96

18 22 0.0013 0.08 14.2 1.3 1 23 814 836 814 836 0.98

19 22 2.2e-05 0.0013 19.8 0.7 3 23 844 864 842 864 0.96

20 22 4.7e-06 0.00029 21.9 1.0 1 23 870 892 870 892 0.98

21 22 9.8e-05 0.006 17.8 0.1 1 23 898 920 898 920 0.99

22 22 0.00071 0.044 15.1 4.7 1 23 926 948 926 948 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0073	0.45	11.9	3.7	1	23	64	87	64	87	0.97
2	22	0.00018	0.011	16.9	0.1	2	23	93	114	92	114	0.96
3	22	0.00011	0.0065	17.7	3.1	1	23	120	142	120	142	0.98
4	22	0.0062	0.38	12.1	0.6	1	23	147	169	147	169	0.97
5	22	0.081	5	8.6	2.0	1	23	177	198	177	198	0.97
6	22	3.8e-05	0.0023	19.1	0.6	1	23	204	226	204	226	0.99
7	22	0.00016	0.0099	17.1	2.1	1	23	232	254	232	254	0.98
8	22	0.00021	0.013	16.8	1.3	1	23	260	282	260	282	0.98
9	22	8.5e-05	0.0052	18.0	2.9	1	23	288	310	288	310	0.98
10	22	0.0017	0.11	13.8	0.8	1	23	576	599	576	599	0.94
11	22	0.00019	0.012	16.9	0.8	1	23	612	635	612	635	0.95
12	22	0.82	50	5.4	1.0	1	21	639	659	639	660	0.95
13	22	4.5e-05	0.0028	18.8	1.2	2	23	672	693	671	693	0.97
14	22	1e-06	6.4e-05	24.0	2.6	1	23	699	721	699	721	0.96
15	22	0.0014	0.088	14.1	1.0	1	23	727	750	727	750	0.95
16	22	0.019	1.2	10.6	0.7	1	23	757	779	757	779	0.98
17	22	0.022	1.4	10.4	6.9	1	23	784	806	784	806	0.96
18	22	0.0013	0.08	14.2	1.3	1	23	814	836	814	836	0.98
19	22	2.2e-05	0.0013	19.8	0.7	3	23	844	864	842	864	0.96
20	22	4.7e-06	0.00029	21.9	1.0	1	23	870	892	870	892	0.98
21	22	9.8e-05	0.006	17.8	0.1	1	23	898	920	898	920	0.99
22	22	0.00071	0.044	15.1	4.7	1	23	926	948	926	948	0.98

Sequence Information

Coding Sequence: ATGGAGTCCCTAATTAATTTTGATGGCAGCACTAGTAATACATCAGCATCATCTGCAGCTCCCACGAAAAGTATTGAAGAAATTACAAATATTAGGCAAGAGGAAATGTTTTTAGCTGAATCAAATGAAAATGTAGAGTCTTCCAAGAGCAAACATCGCAGAAGAAAAGAGGCTATTAACAAGAGGTCACATAAATGTTTACAATGCAAAGCCTGCTTTACTACAGACGAACAATTAGAATTGCACATAAAAGTCAAGCACAATAATGAACTATTAAAATGCGATGAATGTGACAAAGCTTTTCGGACTATTGGTGCGTATAATGCACACAGGAGTatacataaagatgataaaccgttcatatgtaagatatgtaatggcacttttaaaaataaatacactttaaaggagcactacaagaaacataatggggtcatatatacgtgtcagttctgcgccagagattttaatacatttgctaatttgcaaattcacgaagccaaacatactggcgacttgaaaaacaagtttaaatgcaatatttgtgagaaatatttggataagtctaagaaattaacgcacatgagaatacataccggggagaaaccgtacaaatgttcaatgtgtgctagtgcattttctgataaaggcaatctaacgcaacattatcgcattcatactggtgagaaaccgtacaaatgtgaaatctgttctaaagaatttagacagaacagtgctttgacctttcacaaacggtcgcacgtaacatataaaccgtttgaatgcaaattttgcggatgcaaattcggatcaaacgaagagttggtaatgcatttaagagttcatggtgaacaaaagatgtttaaatgttcgtattgtgatttagaatttcaagagcattccaatttaaaaTCTCACATTCGTTTACATACCTTCGTAGCGTTTAAGCCCAAATCGATTGTTATATGCAAAGAGACATTAGACATTCACGATAAACAAAACTACTTAAAAGAGGGTGAAGTATATGAGCCCAAAATTGATGAAAATTCGTCCAACAAACCACATCGTAATGCAAATCTAAAAATTCAAACCGAAAGTCCTGTTAATCGCGAGGTTAATCGGCTAATTAAACCAAGAAAACGAAAAGAAAAGCCAACAAAATGTTCAACAAAACAAAAGTTAAGGGACAGCCGTTCATCTAATGATAAATCAACTGCAAACAATAAATTGTCAATAAAATCTAAAGGCAGCCTAACTGCTGCTGCTACTACTGCACTTAACGATACCGAGGAAATAGAATTACAGGAAGCTACAGTTATAAAAAAAGAACCTTATGAACATATAATTGTCGATATGGACATTGATGATGACATTGAATTCAATGAAGCTTCGGTAAAAAGTGAAGACAGCTTAGACGAGCCTCTTGAAGACATCTTCCATGTTAGTAGTATTAAAGAAGAACATAAAGAGTCTGTTGAAACAATTGAGAATATTAGTATTGATAGAACAGATACTCAAATCGCCGACAACGAGGAAAATAGTAAACAATCGATTTTACCAGTTGATGAGTTGAAAAGAGAAAGTAACTCCAACGATGATATATTAATAAATTTTGACTATAATATTAAGATAAAAAATGAACCACATGTTGAGGATGAAGTTAGAAGCGAAAAAAATAAAAATATAATCCGCACAACTGTAGAAAATGCAGAGGGGAAAAAACGATTTCAATGTGAAAAATGTCCTGCATCGTATGCACGTAAATATTCACTTTTCTTGCATAATTCTAAAGGACATGCGAACAGTCCGAAAACCAGAAAAGAAAGTCAAAAACATCAATGCGCATACTGCTCAAAGTTCTTTGCACAGGCTTCCTATCTTGTTCAACACATTGGGAAAGTTCATCCTGGAAACTTTGTGTGTACGAAATGTGATCTGGATTGCATTGATTTCATTGGCTTTAAGGAGCATCAAAGATATTGCAAGATAAAAAAAACAGCTGCGTTTAAGGGTCAATGTTCAATTTGTGATAAAATATTTAAAGACAGACATTCACTGGAAATGCATGAAAACAGTCATAATGGAATTCGACCATTTGAATGTGATTATTGTGGGAAACGGTTCTCATCAAAATATAGTCTAAAAACTCATATCTTCAATCATGTTGGCATATTGCCACACAAATGTGACTTGTGTGAGAAAAGCTATGCTTTTAAGGGTCTTTTAACTGTGCACGTTCAATTGACACATGCGGACAATAGGCACGACTTTAAGTGTAATATTTGTGGAGACTATCTTAAATCCAGGGGTCGCTTGTACAATCACATGCAAATACATCGAGAACCAGCCTATAAATGTTCACATTGTGGCAAAGGATTTAAGAAACTATCCAACTGTAAACTTCACGAAACTAGACATTTGGACACTGCAGACAAGAAGTTTCCTTgtgcaatgtgcgaaaagtcgtttgttcaaaaaatcaaattaatttgtcacattcgtacacatactggcgaacgaccacatctgtgtacgatgtgtccgtcacgatttgcggacaaaagtaatctggtagcacatatgcgtattcacacgggtataaaaccttatcgatgttctgaatgtaataaggagtttgcccaattgagttcgttgaaagttcacaagaaaattcacatagaatataaaccattcaaatgtgaatattgtgctaaggaatttgccctaaatgaagatttgatcgttcatttacgagtacacggtgatgtgccattgtttaagtgtaacttctgtgacaaagtctATGAAAAATTGTGCAACTTAAACTCTCACCGTCGATTACATAAAATACAATAA
Protein Sequence: MESLINFDGSTSNTSASSAAPTKSIEEITNIRQEEMFLAESNENVESSKSKHRRRKEAINKRSHKCLQCKACFTTDEQLELHIKVKHNNELLKCDECDKAFRTIGAYNAHRSIHKDDKPFICKICNGTFKNKYTLKEHYKKHNGVIYTCQFCARDFNTFANLQIHEAKHTGDLKNKFKCNICEKYLDKSKKLTHMRIHTGEKPYKCSMCASAFSDKGNLTQHYRIHTGEKPYKCEICSKEFRQNSALTFHKRSHVTYKPFECKFCGCKFGSNEELVMHLRVHGEQKMFKCSYCDLEFQEHSNLKSHIRLHTFVAFKPKSIVICKETLDIHDKQNYLKEGEVYEPKIDENSSNKPHRNANLKIQTESPVNREVNRLIKPRKRKEKPTKCSTKQKLRDSRSSNDKSTANNKLSIKSKGSLTAAATTALNDTEEIELQEATVIKKEPYEHIIVDMDIDDDIEFNEASVKSEDSLDEPLEDIFHVSSIKEEHKESVETIENISIDRTDTQIADNEENSKQSILPVDELKRESNSNDDILINFDYNIKIKNEPHVEDEVRSEKNKNIIRTTVENAEGKKRFQCEKCPASYARKYSLFLHNSKGHANSPKTRKESQKHQCAYCSKFFAQASYLVQHIGKVHPGNFVCTKCDLDCIDFIGFKEHQRYCKIKKTAAFKGQCSICDKIFKDRHSLEMHENSHNGIRPFECDYCGKRFSSKYSLKTHIFNHVGILPHKCDLCEKSYAFKGLLTVHVQLTHADNRHDFKCNICGDYLKSRGRLYNHMQIHREPAYKCSHCGKGFKKLSNCKLHETRHLDTADKKFPCAMCEKSFVQKIKLICHIRTHTGERPHLCTMCPSRFADKSNLVAHMRIHTGIKPYRCSECNKEFAQLSSLKVHKKIHIEYKPFKCEYCAKEFALNEDLIVHLRVHGDVPLFKCNFCDKVYEKLCNLNSHRRLHKIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -