Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010027229.1:10590-15295[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.1e-05 0.00068 20.8 1.2 1 23 530 552 530 552 0.96

2 18 0.0012 0.074 14.3 0.1 1 23 558 580 558 580 0.97

3 18 7.9e-05 0.0049 18.1 1.5 1 23 586 608 586 608 0.98

4 18 0.0015 0.091 14.1 2.3 3 23 616 636 614 636 0.97

5 18 9.3e-05 0.0057 17.8 6.7 1 23 642 664 642 664 0.98

6 18 0.00012 0.0077 17.4 5.2 1 23 670 692 670 692 0.97

7 18 9.8e-07 6e-05 24.1 5.0 1 23 698 720 698 720 0.98

8 18 2.9e-07 1.8e-05 25.7 2.5 1 23 726 748 726 748 0.97

9 18 0.00015 0.0092 17.2 6.7 1 23 754 776 754 776 0.97

10 18 0.00022 0.013 16.7 5.4 1 23 782 804 782 804 0.98

11 18 3.6e-07 2.2e-05 25.4 1.6 1 23 810 832 810 832 0.98

12 18 9.4e-05 0.0058 17.8 9.8 1 23 838 860 838 860 0.98

13 18 6e-06 0.00037 21.6 6.2 1 23 866 888 866 888 0.97

14 18 0.00045 0.028 15.7 9.0 1 23 894 916 894 916 0.98

15 18 3.3e-05 0.002 19.3 6.2 1 23 922 945 922 945 0.96

16 18 0.00014 0.0083 17.3 0.3 1 23 951 973 951 973 0.97

17 18 1.6e-05 0.00098 20.3 1.5 1 23 983 1005 983 1005 0.99

18 18 1.8e-05 0.0011 20.1 0.6 1 23 1011 1034 1011 1034 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.1e-05	0.00068	20.8	1.2	1	23	530	552	530	552	0.96
2	18	0.0012	0.074	14.3	0.1	1	23	558	580	558	580	0.97
3	18	7.9e-05	0.0049	18.1	1.5	1	23	586	608	586	608	0.98
4	18	0.0015	0.091	14.1	2.3	3	23	616	636	614	636	0.97
5	18	9.3e-05	0.0057	17.8	6.7	1	23	642	664	642	664	0.98
6	18	0.00012	0.0077	17.4	5.2	1	23	670	692	670	692	0.97
7	18	9.8e-07	6e-05	24.1	5.0	1	23	698	720	698	720	0.98
8	18	2.9e-07	1.8e-05	25.7	2.5	1	23	726	748	726	748	0.97
9	18	0.00015	0.0092	17.2	6.7	1	23	754	776	754	776	0.97
10	18	0.00022	0.013	16.7	5.4	1	23	782	804	782	804	0.98
11	18	3.6e-07	2.2e-05	25.4	1.6	1	23	810	832	810	832	0.98
12	18	9.4e-05	0.0058	17.8	9.8	1	23	838	860	838	860	0.98
13	18	6e-06	0.00037	21.6	6.2	1	23	866	888	866	888	0.97
14	18	0.00045	0.028	15.7	9.0	1	23	894	916	894	916	0.98
15	18	3.3e-05	0.002	19.3	6.2	1	23	922	945	922	945	0.96
16	18	0.00014	0.0083	17.3	0.3	1	23	951	973	951	973	0.97
17	18	1.6e-05	0.00098	20.3	1.5	1	23	983	1005	983	1005	0.99
18	18	1.8e-05	0.0011	20.1	0.6	1	23	1011	1034	1011	1034	0.97

Sequence Information

Coding Sequence: ATGCAATATGCTGAAGATGATAACAACAACAATAATGGACAACAAATTACAGCTGAGGAAAATGCTAACAATCGAACAATTGAAATTCTTCCATCATCCAGTGATCGATTAAATTCGTCTATTGCCAGTGTGGCTCAGTTGGGTAAATATTGGGTTTTGACAAATTTGTTTCAAACGCCATATGTCTATAACATTCAACCGAAAATCGAAAAAACCGACAATGTCGATAGAACGACGACTGGCACCGGTGACGGATTAACATCGACAAGTCTTCCATCCCTTGACGATACGTCATTGAATTTATTGGGCTCAAATAATGCCAGCAATTCAATTCCTATATCGATTGCTGGCAGCCAGGGTACAATACGAATTCCGTCGTCTGTTATAAacacaacaagtttaataaatccacaacaattacaaaacataaccatacaacataatcaatctagtcatacagctaatcatcaacagcacctaatcaacaatataattgaaaatcaatcacaacaacagcagcagcacatcttggtacaagttggcggtgaagaggttgtaatggataatatgaaaaatcataaaattgcgacacaacagcagcagcaacaacaacagcagcaacaacaacagcagcaacaacaacaacaacagcagcagcaactacaacaacagcagttgcaacaattacaacaacagcagcagcagttacaacagcaacaacagatacagcaacagcagcaacaacaacagcagcaacaacaacagcaactacagcagcagcggcaacaacaacaacagcaacaacagttgcagcagcagcaacaacaacaacaacaacagcagcagcaacaacaacagcaactgcagcaacaacatgaaatacaacagcagcaacaacagcagcagcttagtaatcaattcaattcgtcaaatcagcaaattcagATTCAACAAATTTTAAATACGGATTTAATAAATCCAACAATAATGCAACATCAGCCCATCAAACAAGAACATTCGAATCATTTGTCTGAGAATCAaacagccccaacaacaactgcagtaacaacggccacacaaacgatacacattaacagtctgaatttgatcaataataataacaacaacaacaacaacaacaacagcactgccgatgataataatTTGATGCATAAACTGCCACCGCTGTCTCAGATCTATGATGTTCGTAGTGCTGACGGTCAAATTATTCAAGTTAACATTGAAGATTTAAGTCAATTTCTAAATTATCATGAAGTTTTCGGCAAGATAACGTCAAATGAAACTGTCGTTCCATCATCTGTAGGAAATGTATCCACAATTACGACAATGGCCCCCACAACAACGGCCGCCACAACGATAAATAGTAAAAATCTATCGCTGGAAACGAATAATGTAATTGTATCGAACCAGGCAACGGCCACGTCAATGTTGACGCCAAAGTTGGAAAATATTTCAAATGCTCAATTGAATAACGTCGTTAGTAGTTGCGTTACTTCAGCGACTGGCGGCAGTGGAGGGGCGGTCGTTGGTGGCAATGATTTGTCCTCTTTGCTGCCACCACCCACACATGCTTGTGATATTTGTGGCAAAATGTTTGCGTTTAAATATCAATTGATTGTACATCGTCGTTATCACAATGAACGCAAACCTTTTATTTGTCAAGTTTGTGGACAAGCTTTTGAGACCACCGTTGATCTGTCGGCCCATGGCAAATCTCATGATGGCAACAATATGTTCACATGTAATGTTTGCTATCATGTGTTTGCCAATGATGCTAGCCTCGAGCGTCATATGAAACGTCATGCTACtgataaaccgtacggatgtagcgtttgtctaaagacctttgcccgcaaagaacatttagacaatcattttcgtagtcataccggcgagacgccctttcgctgtcaattttgttcgaaaacatttacccgcaaggaacacatgcaaaatcatgtccgcaaacatacgggtgagacaccgcatcgttgtgatatttgtcaaaaatcgtttacacgcaaggagcactatgtaaaccattatatgtggcatacgggagagacgccccaccagtgtacggtgtgtgggaaaaaatatacgcgcaaagaacatttggccaatcacatgcgttcgcatacaaacgacacaccgtttcgatgtgaaatttgtggcaaatcctttacacgaaaagagcactttacaaatcacatcttgtggcataccggtgagacgccacatcgttgtgacttttgttccaaaacatttacccgtaaagagcatctgctgaatcatgtccgacaacacaccggcgaatccccgcatcgttgtggctattgcatgaagtcttttacccgtaaagagcatttggtcaatcatatacgtcagcatacgggagaaacgccatttaaatgcgaaatttgtcccaaagcatttacgcgtaaagatcatttggtcaaccatgtgcgccagcataccggtgaatcgccacacaaatgcacattttgtacaaaaacttttacacgtaaagagcatctgacgaatcacacccgcaaacataccggggaTTCGCCGCATCGTTGTACCTACTGCAATAAAGTGTTCACCCGCAAAGAGCATCTCAATAACCACACAATGATTCATACGGGCATTTCTCCGCATAAGTGTGAGTTTTGTGCAAAAACATTTACGCGTAAAGAACATTTAACGAATCACCTGCGACATCATTCGGGCGACAATCCACATGTTTGTACAGTTTGCAATAAACCGTTTACCCGCAAAGAGCATCTAATCAATCACATGAGTCGATGTCACACCGGCGAACGACCGTATGCATGCGAAGAATGTGGCAAATCGTTCCCATTAAAAGGAAACCTGCTGTTCCATCAACGCAGTCACAATAAAGGCATTAAGGCTGAACGCAATTTCCAATGTGATCTTTGTCCAAAGGATTTTATATCAAAAGGACATCTTGTTTCGCATCGACGTTCCCATTCTGGTGAGCGGCCATTTGCATGTGCCCAATGTGGTAAAACATTTATTGGCAAGAACAATTGGTTGCGTCACATGAGAAAGACCCATCCGCACATTGTAAATCCGCAATACAGTAAGTTTTCAATTTTTAATTTTTAA
Protein Sequence: MQYAEDDNNNNNGQQITAEENANNRTIEILPSSSDRLNSSIASVAQLGKYWVLTNLFQTPYVYNIQPKIEKTDNVDRTTTGTGDGLTSTSLPSLDDTSLNLLGSNNASNSIPISIAGSQGTIRIPSSVINTTSLINPQQLQNITIQHNQSSHTANHQQHLINNIIENQSQQQQQHILVQVGGEEVVMDNMKNHKIATQQQQQQQQQQQQQQQQQQQQQQQLQQQQLQQLQQQQQQLQQQQQIQQQQQQQQQQQQQQLQQQRQQQQQQQQLQQQQQQQQQQQQQQQQQLQQQHEIQQQQQQQQLSNQFNSSNQQIQIQQILNTDLINPTIMQHQPIKQEHSNHLSENQTAPTTTAVTTATQTIHINSLNLINNNNNNNNNNNSTADDNNLMHKLPPLSQIYDVRSADGQIIQVNIEDLSQFLNYHEVFGKITSNETVVPSSVGNVSTITTMAPTTTAATTINSKNLSLETNNVIVSNQATATSMLTPKLENISNAQLNNVVSSCVTSATGGSGGAVVGGNDLSSLLPPPTHACDICGKMFAFKYQLIVHRRYHNERKPFICQVCGQAFETTVDLSAHGKSHDGNNMFTCNVCYHVFANDASLERHMKRHATDKPYGCSVCLKTFARKEHLDNHFRSHTGETPFRCQFCSKTFTRKEHMQNHVRKHTGETPHRCDICQKSFTRKEHYVNHYMWHTGETPHQCTVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCMKSFTRKEHLVNHIRQHTGETPFKCEICPKAFTRKDHLVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHTRKHTGDSPHRCTYCNKVFTRKEHLNNHTMIHTGISPHKCEFCAKTFTRKEHLTNHLRHHSGDNPHVCTVCNKPFTRKEHLINHMSRCHTGERPYACEECGKSFPLKGNLLFHQRSHNKGIKAERNFQCDLCPKDFISKGHLVSHRRSHSGERPFACAQCGKTFIGKNNWLRHMRKTHPHIVNPQYSKFSIFNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -