Dfer026100.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diadocidia ferruginosa
Gene Symbol
-
Assembly
GCA_027564275.1
Location
JANSTW010022874.1:278-6053[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 3.1e-06 0.00019 22.5 1.2 2 23 187 208 186 208 0.97
2 25 0.029 1.8 10.0 1.7 1 23 215 237 215 237 0.98
3 25 0.00017 0.011 17.0 3.2 1 23 274 296 274 296 0.98
4 25 0.46 28 6.2 2.5 1 23 303 325 303 325 0.88
5 25 0.00015 0.009 17.2 1.1 1 23 360 382 360 382 0.96
6 25 0.00012 0.0075 17.5 0.8 1 23 389 411 389 411 0.97
7 25 0.011 0.67 11.3 0.4 1 23 426 448 426 448 0.98
8 25 5.9e-05 0.0036 18.5 3.1 2 23 457 478 456 478 0.97
9 25 0.00025 0.015 16.5 3.7 1 23 484 506 484 506 0.98
10 25 1.8e-05 0.0011 20.1 0.6 2 23 514 535 514 535 0.97
11 25 1.9e-05 0.0012 20.0 1.3 1 23 541 563 541 563 0.96
12 25 5.3e-06 0.00032 21.8 3.4 1 23 784 806 784 806 0.98
13 25 0.0091 0.56 11.6 1.0 1 23 813 835 813 835 0.98
14 25 0.0023 0.14 13.5 0.2 1 23 873 895 873 895 0.94
15 25 0.0048 0.3 12.5 1.3 1 23 902 924 902 924 0.97
16 25 0.0025 0.15 13.4 0.5 1 23 971 993 971 993 0.97
17 25 1.3 78 4.8 4.4 1 23 1000 1022 1000 1022 0.91
18 25 0.0014 0.084 14.2 0.6 1 23 1037 1059 1037 1059 0.98
19 25 2e-05 0.0012 19.9 6.3 1 23 1067 1089 1067 1089 0.97
20 25 0.0017 0.11 13.9 2.2 1 23 1095 1117 1095 1117 0.97
21 25 2.1 1.3e+02 4.2 0.1 11 23 1129 1141 1126 1141 0.90
22 25 5.9e-06 0.00036 21.6 1.5 1 23 1147 1170 1147 1170 0.97
23 25 0.0032 0.2 13.0 0.4 3 23 1182 1202 1180 1202 0.97
24 25 3.9e-07 2.4e-05 25.3 1.1 1 23 1208 1230 1208 1230 0.99
25 25 0.00045 0.028 15.7 0.3 1 23 1236 1258 1236 1258 0.96

Sequence Information

Coding Sequence
ATGGATTTTAAAATAAACACAACTTATAGTTTGGTAAAGGTGTGTCGAATATGTTTGCAGAATAAAAACAATGAAGACGGCTCCGAACAAATGACCGAAATAATGGAAACAACAATAGTAGACGCATTAAATATTTCACTCTTGGATTTGTTTCTTGCTTTTACTGCTCTGCCAATGGATCAAACGAAAGGATTTCCAACACAGATTTGTACAAATTGTCAAGAGATTTTAGTTTCGGCATATGAATTTCAACTGAAATGCATTAAAAGTGACCAAGACATTCGTATGGCTTTGTTGCAAACAACTGCCGAAAATAACTCTGCAACTAATAATGATGAATGCGGAATTACAGATGATGATTCTTTTAAAACGGGTGATAATGCGATTTTTTTTAAAGAACATTGTTTTGTTGATAGTTATGAGAACATAGCTGTTAAAGATGAGCTAGAATCTATTCAAGAGCTTCCAAGAAATGAGATTTACGAAGAATCAGAAGAAAAAATTGTCAATGAAGATTCTTCTAATAAAGTACGTAAAATATATAAGAATAAGATGGTCAAATGTGAGATTTGCAATAGAACATTTAATAAAAGTTATAATTTGTTGCGGCATTTGAAAGTTCATGAAACCGAAGGTAAACCATTTGAATGTCAATTTTGTAAAAGACGATTTGCCGAAGAAAAATCCATGATTACCCATACAAATAGTCATAAGTTAGACGATTTGCGAAGGTATGAGGATAGAGAAATAGATTCAGGTAACAATTCCACAGATGATGAAGATGATGATACAAAAATAATGAAAATTAAGAATAAACTATACAAATGTTTGATATGTAATAAATCGTTTGATAAATCTTGTAATTTGGTTCGACATTCTAATGTGCATAATCCTGAGGGTAAACCGTTTGAATGCAAAATTTGTAAAAGACGATTTGCTGTCGAAAGTCGATTGATTTGTCATCAATTTTTACATAAACCGGACGAAAGTCCGATCGAAAATAATACGGCTACCGACTCGCTGCCAGTCCTATCTCCTGCTACGGAAACAACGCAAATAAAACCTAGAAAAAAATCACACGTCTGTTTAGTTTGTAATAAATCATTTGTTAATCAAACTTTATTGCAAGTTCACTCTAAGATACATGACCCCGATGGTAAACCATTTCAATGCAATGTTTGTAAAAAGCGATTTGCTGAACAAAACAGTTTGATTCGTCACGAACTTAACCATTCAAAAGACTTAGTAGTTTATAAAATGGAAGAGCCTAAGTTTTTTCAATGCACAAAATGTCCTCGAGAATTTTTGAAAAAAGAATCACTGGCATTGCATGGAAGAGTTCATCGAAACAATCAGAGTCCAGGCAAAACTTGTGATTATTGCCAAAAAACATTTTTTAAATTATTCAATTTAAAGCGTCACATAAAAATCCACATTAGTACTAAGCAATATCGTTGTAGACGATGTGATAAAACATTTACAGATCATGGACAACTTGTCGAGCACCGAAAAAATCATAATGAATCAACAAAACATAATGTTTGTTCAATATGCAATAAGAGTTACTCTAAACTGTCTACGTTAAAGGATCACATGCTTGTTCATAATGGGGAAACACCTTATCTGTGTTCTGTATGCGGTAAATCATTTGGTCATAAAGCCACTTTAGCACATCATATGATAATACATGCGAATAAACGTTTTGCGTGTGGCGGCACTATGGATTTACAAGTGAAACCCGCCGACGGTAAATTCGTAAAGTTGTGTCGAATATGTTTGCAGAATAAGGATGTTTTCGGTAATGAAATGGCCAAAATCTATGACATCAAAATAGATGAACTAAATATCTCTCTTTGCGATTTGTTTGCCGCATTTACTGCTCTGCCAATGGAGCAAACCGAAGGATTTCCAACGCTAATTTGTACGAATTGCCAAAATAGTTTGGTTTCGGCATATGAATTTCAAATAAAATGTATCAAAAGTGATCATGACGTTCGTATGGCATTGGGCCTTTCTTTGCCTAAATCGTCAATTGAAGATAAATTGGAGATAATAAAGGATCCGATTAAGACGGAATCAAATGTTATATTCTTTAAGGAGCACAATGATTACATTTTTGGCAGCAAAAAACCAATAAAATCTGAGCCAGTCGAGTTAAATTCGCCAGAAGTATTGGCCGACTACGACGACAAGACAATAACAACAGCCGCAATTATAAAACCATTTGATTTTCATGATGGCGGCGGAGCACAAAGCTCTACATCTTCTTCCGATGATGACTTACCGGACGCTGATTGGTCTTTTAATAGTCCTGAAACAAAGAAGACGTCTAAGAAGAAAAAAAAATCGTATAACTGTAAAATTTGTAACAGACCCTTTAGTCGAGTTGATCATTTGTTTCGCCACTTAAAAACTCATGATTCCGAAGGTaaaccatttgaatgtgatgtgtgtaagagacgtttTGTTTTAGAACTTAATATGGTACGTCATAAGAAAACACATAGCTCAGATAAAGCCAAAAAGGCAGAATCCGACGGCGAGTCTTCATCGAATGAATCATCTGATTATTCCACCGACGATGATACAAAAATAATGAAATTGAAGAAAAAACACTATAAATGTTTAGTTTGTGAGAAAACATTTGACAAACCGTCTGCTTGGCTTCGTCATTCAGTCGTTCATAAGGCTGAGGGTAAACCATATGAATGTAACATTTGTAAAAAGCGCTTTGATCTCGAAAGTCGACTGGAATACCATAAACTTTCACATTCAGCAGATTTAAAAACAGAAGTAATTGATGAACAATCGACGGCAAGCAAAATTGATGATCAGCCGCGATCAGATGGTACTACAGCTGAACCATCGGAGGAGCAACAAACAACAAATATAAAGTCCAACAAAAATACATTCATTTGCTTCGTTTGCGATAAAGATTTTGAGAAAATGTCTGCTTTGTTAAGACATTCAAAGATACACGATTCGAAGGGCAGACCATTCGAGTGTAAATTTTGTAAAAGACGTTTTACATCCGAGAGACGCTTGATTTGTCACGAAATTACCCATTCATCGGATGTGATTGTGACTGGAGAGGAGAAACCAACATTGTATCCATGTTGTGAATGTCCACGTGAGTTTTTGAAACAAGAATCACTTTCGGCACACATGCGAGTTCATCGAGATCAGAACGTACAAAGTTTTTCCTGTGATTATTGCAAGAAAACTTTTTCGAAATTTTACCATCTAAAGCGACACATGCAAGCCCACGTCAAAACTAAAGTGTTCCGATGTAGAAATTGCGATAAAACATTTACAGCACACGAAGAACTCGTGGAACATCGAAAAGAACACAAAGAATCGGAAACAGATCTCTTCTGTGGTATCTGCAATAAAACCAACTTAAAATCTCATATGGTAACACATACCGGTGTTAAGGCACACACATGTGACACGTGCGGATCAACATTCACGAGGCCCGATTCGCTCAGAAAACATATAATGCGGATCCATGCGGCTCAAAAGACGAAGGAAAAATCACTGGCCTGTTCGTTGTGCGACATGAAATTTTATATGACCTATGaagttgtgcgacatatgcgtacgcatacaggcgaaaaaccatttaaatgtgactattgtgatcgagcatttgcgcagaagggagatctaaataagcacactcgttcgcacattggtgaaaatacttatcagtgtaaggaatgtccggcagcatttaaaatgcaaattgatctaaaaagacacaatcAAGAGCATTTTCTACAAAAAAAGTATAGTGAAAATAATGAGGAGGCTACTACTGCTGCTACTGCACAACATACTAACCCATAA
Protein Sequence
MDFKINTTYSLVKVCRICLQNKNNEDGSEQMTEIMETTIVDALNISLLDLFLAFTALPMDQTKGFPTQICTNCQEILVSAYEFQLKCIKSDQDIRMALLQTTAENNSATNNDECGITDDDSFKTGDNAIFFKEHCFVDSYENIAVKDELESIQELPRNEIYEESEEKIVNEDSSNKVRKIYKNKMVKCEICNRTFNKSYNLLRHLKVHETEGKPFECQFCKRRFAEEKSMITHTNSHKLDDLRRYEDREIDSGNNSTDDEDDDTKIMKIKNKLYKCLICNKSFDKSCNLVRHSNVHNPEGKPFECKICKRRFAVESRLICHQFLHKPDESPIENNTATDSLPVLSPATETTQIKPRKKSHVCLVCNKSFVNQTLLQVHSKIHDPDGKPFQCNVCKKRFAEQNSLIRHELNHSKDLVVYKMEEPKFFQCTKCPREFLKKESLALHGRVHRNNQSPGKTCDYCQKTFFKLFNLKRHIKIHISTKQYRCRRCDKTFTDHGQLVEHRKNHNESTKHNVCSICNKSYSKLSTLKDHMLVHNGETPYLCSVCGKSFGHKATLAHHMIIHANKRFACGGTMDLQVKPADGKFVKLCRICLQNKDVFGNEMAKIYDIKIDELNISLCDLFAAFTALPMEQTEGFPTLICTNCQNSLVSAYEFQIKCIKSDHDVRMALGLSLPKSSIEDKLEIIKDPIKTESNVIFFKEHNDYIFGSKKPIKSEPVELNSPEVLADYDDKTITTAAIIKPFDFHDGGGAQSSTSSSDDDLPDADWSFNSPETKKTSKKKKKSYNCKICNRPFSRVDHLFRHLKTHDSEGKPFECDVCKRRFVLELNMVRHKKTHSSDKAKKAESDGESSSNESSDYSTDDDTKIMKLKKKHYKCLVCEKTFDKPSAWLRHSVVHKAEGKPYECNICKKRFDLESRLEYHKLSHSADLKTEVIDEQSTASKIDDQPRSDGTTAEPSEEQQTTNIKSNKNTFICFVCDKDFEKMSALLRHSKIHDSKGRPFECKFCKRRFTSERRLICHEITHSSDVIVTGEEKPTLYPCCECPREFLKQESLSAHMRVHRDQNVQSFSCDYCKKTFSKFYHLKRHMQAHVKTKVFRCRNCDKTFTAHEELVEHRKEHKESETDLFCGICNKTNLKSHMVTHTGVKAHTCDTCGSTFTRPDSLRKHIMRIHAAQKTKEKSLACSLCDMKFYMTYEVVRHMRTHTGEKPFKCDYCDRAFAQKGDLNKHTRSHIGENTYQCKECPAAFKMQIDLKRHNQEHFLQKKYSENNEEATTAATAQHTNP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-