Basic Information

Gene Symbol
Snapc4
Assembly
GCA_027564275.1
Location
JANSTW010040803.1:1-5693[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6.4 6e+03 -1.7 0.1 2 18 62 78 61 78 0.89
2 6 0.092 88 4.2 0.1 22 44 146 170 138 171 0.85
3 6 3.5e-06 0.0034 18.3 0.4 1 42 178 220 178 221 0.90
4 6 2.5e-13 2.4e-10 41.2 0.0 1 43 230 276 230 279 0.96
5 6 7.7e-17 7.3e-14 52.4 0.2 2 46 286 331 285 331 0.97
6 6 1.4e-07 0.00014 22.7 0.0 2 41 338 378 337 382 0.94

Sequence Information

Coding Sequence
AATGCAGTGAAATTGCAATTGGCTTCGCGGAAAAAGTTGGAAGAATTTTCTCGAAATGTTGTAACGACATTGGCGTGTTATCCTCCATACTTTAAAGATCTTGTTGGAATGGCACCCCAATTAAATTATGAAGCAAAAGAAATTGCCAAAATTTGCAAAATTAATCCGTTAATTTCTGAAGAACGTCCATGGCGTGAATCTGATTTAAATATATTAAAAGAAGGCGTTAGGGAATCGGTTTTTGAAAACATGGTTGTATCACTTAACGCTAGGAAAGAGATTTTGATAGAGAAAAATTGCAATTCTGGTGTAGCCGTTTCAGCTGACGAAAGGCAAATGTGGCGGGACGAAATTGAACGAATTAACCGACGAATTGTTTACTTAAGAGAACGTTCTGATGAAGAGCTTTTTGCTGGAAATAATTATGAAAATGTGGATTGGATGAAGATTTCTGCTAGTAATTTTAATGGATCTCGTTTGGTGACTCAAGTTAAAATGAGATGGTGTAATGAAGAAGCTCCGGTTTTCTACAAAGGTGAATGGACTGATGCTGAAGATAAACATTTGAAGGAAGTAGGCAAGCGACCGTGGTTAAACTGGGATGTGATTTCTGAACAACTAGGTACTTCTCGAAGTGCTTACAGTTGTTTTCAAAGATTTAAAATTATTCAGGCAAGAGATCGTGGAAGAAAGCCGTGGACAGCTGATGAAGATGAGAAATTGGAATCTTTGGTACAGACCCTTCGTGTTGGGGATGAAATACCATGGTGCAAAATTTCTACTTATCTTCCTGGAAGATCAAAAGAGATGTGCCAAAGTCGTTATGTTCGTTCATTAAATAGGAATATTAAACATGGTCGATGGACTATAACGGAAGATCTCATTTTACTAAATGGTATTAACAAATATGGACCTCAAGACTGGCAACGCATTGCAGATCTTGTGCAAAATAGAAGTGCTATTCAATGTAGAGATAGGTGGATAAACGTTTTGGATTATAAGCGAAGAAATAAACCATGGCTTTGGGAAGAGCACGAACGTCTTTTTTTTGGAATTCGTATTTTTGGAAGGAAAAATTTTGCAAAAATTGCGCTTTTGTTGCCTGGCCGGAATAATATGGACGTAAAGCAAAGAATATTTTCATTGATGAGATACAAAATTGCGAAATTTGAAGAAGAAGTGAACGGGTCAAAAAAGGCTGAGTATAGAAATATGAGTTCGAGTCATATGTTTAAAAAAGATCGTCGAGATATGGTCTTAAGTAAATTTCGCCAATTTACTGAGGTTATATCTCAATTTGAAAACAATCGAACTCAGCAATTAGATAATCGAATGGGAATGGGATCGTTTATGCTGACAGCTGAAGGCAACCCTGTGGATTACACCGCTTCAAAAAAAGCTATGCAATATGAATTTGGTCGTATTATTACTCGTTGTGGTAGATGGACAGGAATTGGTCGAAATCCAAATGAGTTTGACAATACAGAACTTGAAGATGAGCTACGAAAATTGTCTGTTGAAAAACGAGAAAAACTTAAATCCTTTCTTTGTGAATCAGACATTCGCTATGCGGAAGAGCGTAAATTGGAAGAAAAATTTTCAAAAAAGCAAGAGAAAACACTTGAATTTTATGAATCAATTATTACTTCAGAACGCTTAACACGTATGCTTACATTGATGGAAGAATTGTTGCCGGTAGAAGTTAGTGACGTAATGCGATACAATAAAATGAAGTCTCGGCCACCAAAATTGACGCCATTACAAAAGGCAAAAATGATTCCACATCCTACTACAGTTGCAGAGAGAAAGAAAAAATCAACAAAAAGGAAAATGGCATCGTTTTCACTTGAAACTATTGCACCAAAGCGTTTTGTTACAGTAAAAGATAGATTAATGGAAGAGGTTAAACTACAAATATGCTCGGTAGTTCCAACAGATAGAAGAATATGTGTTATTCGCAATTTGTGCACTTATATACGACGCTGCGATGATATTGTAAATTTTGATCGTTATAAACGTGAAGGATTAAAGCAAAAGTCATTAAATATTACAATGAAATATTTTTCGGAGATATTGGAGATTACAAAAGAGAAAAAAAAAATTGTTAAGCAGGAGGTTAATATGCCTAAATTTTCCTTAAAAAATGCACTTTTATCCCTTCTAATGCCATGTGTAGGAACTTTGAATGCAACAGTTTTATATACAGTAGATAATCGTCTCGATATTCGCCTTGCAGAAAACATAAAAAATTCTCAAGAATATATTGAATTAAAGACGCGAATGTATCGAATGTTCTTTTTGCCGTTAATTATGCAAACAGCAATATTAAAACCAGAAGAAATTGAAAAACGACATGTTGAGCGAGACTTAATTTACCGACGTAGATTAGCTGAACAGCATTTTATGAAAGAGACATCAATAAAAAATAAATTTCGGAATGGTATTCCTGGCGCTTGTGTTGTTAAATGTAATGTTGACCAAAATGTTACCGCACTTAATACCATTGAGCGTGCTAATCACGATCTCCTCCATCATATTTTTAACAAATATGCATCTGTAGAGAAGAATGGGAAAAAGTTTATGACTGATTCAGATTTTATTAGGAAGTAG
Protein Sequence
NAVKLQLASRKKLEEFSRNVVTTLACYPPYFKDLVGMAPQLNYEAKEIAKICKINPLISEERPWRESDLNILKEGVRESVFENMVVSLNARKEILIEKNCNSGVAVSADERQMWRDEIERINRRIVYLRERSDEELFAGNNYENVDWMKISASNFNGSRLVTQVKMRWCNEEAPVFYKGEWTDAEDKHLKEVGKRPWLNWDVISEQLGTSRSAYSCFQRFKIIQARDRGRKPWTADEDEKLESLVQTLRVGDEIPWCKISTYLPGRSKEMCQSRYVRSLNRNIKHGRWTITEDLILLNGINKYGPQDWQRIADLVQNRSAIQCRDRWINVLDYKRRNKPWLWEEHERLFFGIRIFGRKNFAKIALLLPGRNNMDVKQRIFSLMRYKIAKFEEEVNGSKKAEYRNMSSSHMFKKDRRDMVLSKFRQFTEVISQFENNRTQQLDNRMGMGSFMLTAEGNPVDYTASKKAMQYEFGRIITRCGRWTGIGRNPNEFDNTELEDELRKLSVEKREKLKSFLCESDIRYAEERKLEEKFSKKQEKTLEFYESIITSERLTRMLTLMEELLPVEVSDVMRYNKMKSRPPKLTPLQKAKMIPHPTTVAERKKKSTKRKMASFSLETIAPKRFVTVKDRLMEEVKLQICSVVPTDRRICVIRNLCTYIRRCDDIVNFDRYKREGLKQKSLNITMKYFSEILEITKEKKKIVKQEVNMPKFSLKNALLSLLMPCVGTLNATVLYTVDNRLDIRLAENIKNSQEYIELKTRMYRMFFLPLIMQTAILKPEEIEKRHVERDLIYRRRLAEQHFMKETSIKNKFRNGIPGACVVKCNVDQNVTALNTIERANHDLLHHIFNKYASVEKNGKKFMTDSDFIRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-