Dfer034432.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- -
- Assembly
- GCA_027564275.1
- Location
- JANSTW010090923.1:3998-7811[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-08 3.1e-05 24.4 0.0 14 39 192 216 182 220 0.81
Sequence Information
- Coding Sequence
- ATGTCTGGCAAAAGGGGTCGTAAATGTTCAATGGTGCACTGCAGAAGTTATCAGCATACGCATAAGAATTTGAGTTTTTTCCGATTTCCAAAAGATCCAGAAAGATGCAAAGTATGGATTGAAAAAAGTGGCCGCATCGATCTTATCGAAAAGGGCAGCGTCTACGAGGATCGTGTTTGCCAGTTGCACTTTACGCCAAACATGTTCCTTAACGATTATCGAAATCGTTTACAACAACACGCTGTGCCCGTTCTATATTTAGATGGTCCGCCACCTCCACCGCCGAAACCAGCATCGTTGCCCATTCCACGTGGCCCGCGCGGTTCGTACAATAAAGACAATCGATTACACACAATACGAAATGGAAGTTCGCCACCAATGTTGGTTATGAAATCCGATCTAAACATGCTCGATCAACCGTCAATAAAACGTGTTAAAATCGACACAAACGATGAATTGCTAGAGATAATGGCCGTGGAGACTATGTCGCCACAAATGGAGTCAAATCGCAGCAAGAAATATTGCATTGCACCACAACAAACCTATCTGGATGCGGCCAAAGAAATGCGTGAAACTGGCATGTCGTTTCGTAAGGCTGCCGAAAAATACAATGTTAATTACGTTACACTTCGGCGATTTTGTAATCGTTTAAATAAACAAAATGGTGGTATCCTCAACACCACATATCCACCACGTCAAATACTGCCCCAACCACAACAACAACAATATCGACAAAATGGGTCATCGCAGATGAACACAAGTCTACCTACTCTATCCCGACAAAAACCAGCTCCAATGCCACAAAATAATTTTATGTCATCAATTCAAATGCAATTGCAATCTCATTTTAATTTACCACCACCATCAGCCCCCCAACAGCCACCGAACAATTTTCAAAAAAGGTCCCCAATTATGCCAAATCAACTGTCACCCCCAAAAGCAGCACAATTTCAACAACAAAAACAATCTCCCACAAAACCAACACCGACAATTGCTCAAAATGCAACACCACCGCCAGCACCATTGCTAAAACGTCCACGACAAATCTTCTCAATTCAACAAGAAGAAGAGTTGGCCGTGTTTGTGCGTGATGCCTCAAACTATTACAACGGAATGAATTCGAAGGATGTTCGAACGTTGGCATTTGTTTACGGTGTCTGTAATCAAGTAGATATGCCCATTGGATGGCGCGAAGTTCATCAGGCATCGTTTGATTGGTGTTTGGGTTTTATAAAACGAAATAAACTGACGTCAATGATGACCTCGTTTAGAAATAGCTCAAATAATAATTCAAATCAAGCGATCGCTGCAAATCAATCGGCCGCTTCCCTTCCAGTAGTTGAGCCCAACAATTCGGCAACTATTGAATCTACTTGA
- Protein Sequence
- MSGKRGRKCSMVHCRSYQHTHKNLSFFRFPKDPERCKVWIEKSGRIDLIEKGSVYEDRVCQLHFTPNMFLNDYRNRLQQHAVPVLYLDGPPPPPPKPASLPIPRGPRGSYNKDNRLHTIRNGSSPPMLVMKSDLNMLDQPSIKRVKIDTNDELLEIMAVETMSPQMESNRSKKYCIAPQQTYLDAAKEMRETGMSFRKAAEKYNVNYVTLRRFCNRLNKQNGGILNTTYPPRQILPQPQQQQYRQNGSSQMNTSLPTLSRQKPAPMPQNNFMSSIQMQLQSHFNLPPPSAPQQPPNNFQKRSPIMPNQLSPPKAAQFQQQKQSPTKPTPTIAQNATPPPAPLLKRPRQIFSIQQEEELAVFVRDASNYYNGMNSKDVRTLAFVYGVCNQVDMPIGWREVHQASFDWCLGFIKRNKLTSMMTSFRNSSNNNSNQAIAANQSAASLPVVEPNNSATIEST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00440418;
- 90% Identity
- iTF_00440418;
- 80% Identity
- iTF_00440418;