Dfer003525.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- bab1
- Assembly
- GCA_027564275.1
- Location
- JANSTW010051812.1:6020-8886[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-13 4.7e-10 39.8 0.0 1 45 402 446 402 446 0.93 2 2 0.033 97 3.6 1.1 4 20 546 561 545 561 0.93
Sequence Information
- Coding Sequence
- ATGTTTGGAACGGAAGGACAAACCTATTGTCTACGATGGAACAATCATAAATCAAATTTAGTTGAAATTTTAGACGTCCTAATACACAAAGAATGTTACGTTGATTGTACGATTTATGTCGATGGACAGGAACAATTTAAAGCACATCGTGTCGTATTGGCAGCAAATTCACCATATTTTCAATCGATCCTCCAAGATGTTCCAATGGATCATTGCAGTATTTTAGTGCCCGGTGTACAAGCATTTGAAATGCGTGCCCTTATCGAATATATGTACACAGGCGAAGTAAATGTAACACAATCACAAATACCACGTATTATGAAAATAGCTGAACAATTAGAGGTGAAAGGTCTGTTCGATATGACCGAAGATAAATTTGACAAAACAGATGACACTCAACATTATACACACAATAGTAACAGTAATAATTTAAATAATAGTAAGACAAATAACCAGCAATCATCGCCCATAATATCCACATCAACGAACATAGCATCGGCACAGAGTAGTAGTGCTTCGCCACCATACAATAATTATAAATCGCCTTACTCAAGCCTATTTCCACCGAACACAGTGCCTTCAAATCCCTTGGAACGAGATCGTTTGTCACAGCATCAACAATCACCACCTCAACAGCATTTACAATCGCAACAACGACAACCGACACCGAGCCCGACTCCACCACCTCCTCCACCTCCACTACCACCATCCCAACCAACACCACTCCCATTAACACCATCTCATCAATGGCCACAAATACCATCACATTTACCCTCAGGTATTCCACCACCACCTCATCTACAAAATACTGCTGCAGCTATGTTAAGTTCTGTGTATGAATCTGGGTCCGATATGAATCCGCTGAAACGGAAGAAACTTTCGTCCATCTCAAGTATGCTAATGTCAAATGATACACCAATTTTGCGTAATGTTTTGGCACAACCAAATGCAGCCGATTCGTCACAACCGGTGCCGCTTATCTGTTCACCAGCACACAGCGAACAAAGTGGACGACACAGTACCCATTCGAATGGTACCTCTGATTATATGGACAAGAAAATGAAATACGAAGATCTTCATGCACAGTATGCTGTTAAGTTTGAGGATGATTCCATGGAAAATGCTCAAAATTACTCAAATGATTCACGTATTGCCTCGTATGTTCCACAACAAAAACCCGAATGGAAGCGATACAAGCAATATACAAGAGCCGACATTCTGTCGGCCATTGAGTGCGTACGCAATGGAATGAGTGCATTGCAAGCAGCTCGAAAATTTGGCGTGCCATCCCGGACTCTTTATGACAAAGTTAAGAAATTGGGCATAACCACTGGTCGACCAATGAATCGAACAATCAAACGTAGCAATAGCAATGGTGGTAGTCCGGCAGCATTTCCATACGGTATTAGTGGAACGAGTAGTCCATATGCCGGCCATCATGATATGCATGGGCATTCTCATGAACTAGACGAAAGTGATTCGCCGATAAGAGAATCACATTCGATTAAACAAGAACATCATATGCCACCATCAATGTCACATCCTGCAGCCGCCTTATTGGATGCAACATTTTTGCAGCAAGCACTTGAAGCACGTGGTGGTGATATTGGTGGCCGTGAAGCCCTGCACGCTATGGCCCTGGCAGCAGCTGCTCATGCTGCTGTCAATGGTATGTCCACAAGTCCCGGTACACATGGAACGGCAAGATCACCGAGTCCAAGTATTCTGCTGAAATATATGCGTCCACCCAGTCACAGTCCAAAcggtatggatcgtgaacgagaacgtgaaagagaaaaggacagagaacgggaccgggaaagagaacgtgatagacaacgacacatggaacgtgaacgagaacgtgatagagaaTATGAACGTGATAATAATAATCCTCATCACAGTCTAAATAACGATGAAGACGATCACGTTGAAGATCTATCGATGAGCAGTAGTAAAAATAAGGAAAATATTGCTCTATGCTCACCACCTCCACTGCTGTCTCAACATCAGCAACTTGGCGTCATTGTGCCTCCAATGGCGGCGAAAATGTTAGCTTTACCTTCACCCACAACCGCCTCCCAACCGTCACCCGTCCATCAGCATAAAAACGACATGTTAAATGTTAAAAGAGAAACCATAACCACATCTACAGAGGATGGTTCTCAGATTTAG
- Protein Sequence
- MFGTEGQTYCLRWNNHKSNLVEILDVLIHKECYVDCTIYVDGQEQFKAHRVVLAANSPYFQSILQDVPMDHCSILVPGVQAFEMRALIEYMYTGEVNVTQSQIPRIMKIAEQLEVKGLFDMTEDKFDKTDDTQHYTHNSNSNNLNNSKTNNQQSSPIISTSTNIASAQSSSASPPYNNYKSPYSSLFPPNTVPSNPLERDRLSQHQQSPPQQHLQSQQRQPTPSPTPPPPPPPLPPSQPTPLPLTPSHQWPQIPSHLPSGIPPPPHLQNTAAAMLSSVYESGSDMNPLKRKKLSSISSMLMSNDTPILRNVLAQPNAADSSQPVPLICSPAHSEQSGRHSTHSNGTSDYMDKKMKYEDLHAQYAVKFEDDSMENAQNYSNDSRIASYVPQQKPEWKRYKQYTRADILSAIECVRNGMSALQAARKFGVPSRTLYDKVKKLGITTGRPMNRTIKRSNSNGGSPAAFPYGISGTSSPYAGHHDMHGHSHELDESDSPIRESHSIKQEHHMPPSMSHPAAALLDATFLQQALEARGGDIGGREALHAMALAAAAHAAVNGMSTSPGTHGTARSPSPSILLKYMRPPSHSPNGMDREREREREKDRERDRERERDRQRHMERERERDREYERDNNNPHHSLNNDEDDHVEDLSMSSSKNKENIALCSPPPLLSQHQQLGVIVPPMAAKMLALPSPTTASQPSPVHQHKNDMLNVKRETITTSTEDGSQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00440522;
- 90% Identity
- iTF_00440522;
- 80% Identity
- iTF_00440522;