Basic Information

Insect: Diadocidia ferruginosa
Gene Symbol: -
Assembly: GCA_027564275.1
Location: JANSTW010086435.1:1190-6607[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1e-11 3e-08 34.1 0.0 1 39 278 317 278 321 0.90

2 4 5.5e-14 1.6e-10 41.3 0.1 1 39 332 370 332 373 0.94

3 4 2.3e-19 6.8e-16 58.5 0.0 1 45 387 432 387 432 0.97

4 4 1.9e-17 5.7e-14 52.4 0.0 1 44 439 483 439 483 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1e-11	3e-08	34.1	0.0	1	39	278	317	278	321	0.90
2	4	5.5e-14	1.6e-10	41.3	0.1	1	39	332	370	332	373	0.94
3	4	2.3e-19	6.8e-16	58.5	0.0	1	45	387	432	387	432	0.97
4	4	1.9e-17	5.7e-14	52.4	0.0	1	44	439	483	439	483	0.96

Sequence Information

Coding Sequence: ATGCGAAGTAGATTATTTTACGGCAACGGAAAATTACAAAATAATTTTCTAAATATATCGTTTTTTAAATTAAAGGGTCTTTTGCGTACAGCCGATCAATTAAAAATTAAAGGTTTATGTGAAGTATCGGAACGGTCATCGGATACACCACCAACAGCAGTAACGGCTCCCCTGAGGAGGAATCGTGCTAAGCGATCACATTCACCGGAACGAATACAATCACCCGAAATTGATTTAAGTTCAACTGAATCGGCCAAACAAGATGACAAAACTGAACCAAATAAAAATTTAAAAACTAGTCCATCAATTATAGTATTAGACCAACGGATCATTAATCGACCAAATGTAAAAGATAAGACCAATGTAGGTGGCGAAGTGAATGGCGTGGTAAATGTAGCAATGGGTTATTTAGATTTTGCCCCAGAACCGGCCGCACCAGCTGCCACTCCAGTAACCGAACATGTTGATCTCAACTGTACGCCAAGTAATGATACAAGAGACCTATCAAGTAACACACCAAATGGTGAAGTACGGGTTAAGTTCGAGACACTGCGCTCTTTGGATCCAGATCAATTAGAAATGGACGGACAGGTGTCACAACATTCGATGCAACATTTAGATCAACCGTCCGATGCTATTGTACTGAAACCCACCGATCAAATTAAGCAAGAACGATCAATTGTAATGGAAATCGATGCCAGCAACATTAAACATGAACAAGTTGAAATGTATAATTCAGAATCCAGCGAAGACTCTAAAATGAATCCAGGCGATTCGCCTACCGATGGCAGTTCTCTGCAATATACAAATTTAGATTTAAAAAAGACATGGACACAAGATGATATGGAGTCGGCTTTGGACGCCCTCCGTACCCATAATATGAGTTTGACCAAAGCGTCTGTCACATACGGTATACCATCGACAACGCTATGGCAACGTGCTCATCGTTTAGGCATCGATACACCGAAGAAAGAAGGTCCAGCTAAGTCATGGAGTGAGGACTCGCTGAATAGTGCACTGGAAGCCTTACGAACTGGACAAATATCGGCCAATAAAGCATCAAAAGCCTATGGCATTCCGTCCTCAACGCTGTATAAGATTGCCAGACGTGAAGGAATTCGTTTGGCAGCACCATTTAATGCAGCACCCACCACCTGGTCACCCGATGATTTGGAACGAGCGCTGGAAGCGATACGAAGTGGACAGACATCCGTTCAAAAGGCTAGTACAGAATTTGGCATTCCAAGTGGTACACTTTATGGTCGATGCAAGCGTGAAGGTATCGAACTGTCCCGAGCAAATCCAACTCCTTGGTCCGAAGATGCTATGATGGATGCCTTAGATTGTGTTAGAGTAGGACAAATGTCGATAAATCAAGCGGCCATTCATTATAATCTACCGTACAGTTCGTTGTATGGTCGTTTTAAACGTGGCAAATATGACGTTAGTGGCTTAGAAACAAGTAACACCTCCTTACAAATGGATCAAAGTCCAGACAATTCATTTCAATATAGTCCGGGTCCAAGTTCTCAACATCAACAAATTATAATCTCATCGGCTCCCTCACCGCAACACAGCAACTCCAATCACAGTGGCCAACATCAAATTATCTACCATACAATTAGCGCCCCATCACCACAGCAGCAACATCATCAACAACAGCAACATATCATGTTACAGCCAAAAATAGAGAGAAGTTGA
Protein Sequence: MRSRLFYGNGKLQNNFLNISFFKLKGLLRTADQLKIKGLCEVSERSSDTPPTAVTAPLRRNRAKRSHSPERIQSPEIDLSSTESAKQDDKTEPNKNLKTSPSIIVLDQRIINRPNVKDKTNVGGEVNGVVNVAMGYLDFAPEPAAPAATPVTEHVDLNCTPSNDTRDLSSNTPNGEVRVKFETLRSLDPDQLEMDGQVSQHSMQHLDQPSDAIVLKPTDQIKQERSIVMEIDASNIKHEQVEMYNSESSEDSKMNPGDSPTDGSSLQYTNLDLKKTWTQDDMESALDALRTHNMSLTKASVTYGIPSTTLWQRAHRLGIDTPKKEGPAKSWSEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPDDLERALEAIRSGQTSVQKASTEFGIPSGTLYGRCKREGIELSRANPTPWSEDAMMDALDCVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVSGLETSNTSLQMDQSPDNSFQYSPGPSSQHQQIIISSAPSPQHSNSNHSGQHQIIYHTISAPSPQQQHHQQQQHIMLQPKIERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -