Basic Information

Gene Symbol
osa
Assembly
GCA_027564275.1
Location
JANSTW010084648.1:1-8753[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-26 1.6e-22 80.5 0.0 3 89 457 540 455 540 0.94

Sequence Information

Coding Sequence
ATGTTATTTTACTACAAAGTAATTTTAAATTGGAAGGGTTTGAATTTAGTTTCCCTCGTTCAAGGCCAACAGAGCCTTCCGATGCCGCCACGTCCTTCGAGTAGTCACTCGCAAACATCAAATCAAGCTCCAAATAATAATTCAAGTCAAACAAATCAGCCACAAACTATTGATCCGGCTGTAACACCACCAACACGTCCACCGCCACAATCATCAACCACACCAACGCCTCCGGGTATGGCAGCTCAAGGTAGTTATCAAACGGCACCGCCACAAccacctcatatgcatggcggctataaaatgggaccaaatccaggccaaggtcctggtgctggttctcagaatatgccaccatatccacctcaatcacaacaatatgcgcaagGAAACTATTCACCTCGACCACAATATCCATCAAATTACGGTCCAGCGCCAACAAATCAACCGCCACCATCAAATAATATGGGACCAATGGGACCAGGGCAATATCAAGGTCGTCCATTACCCAATCACGGAGCACCACATTCACAATTTCCACCATATCAAAATTGGGGTCCAGCACCCCAATCCGGTATGAATCATGTACAAGGAAAAAATACGCCaccacctccaccacccggtagttcaccgcggcctcttaatcacttaaaacaacatttaatgcataaaagtggctatggtggtgcaccaagtccaacgccaccacaaggctatggaaatggtccgggaatgcatccgccaatgggtccgccacatcatatgggcccatcacaacatggtcccaccaatatgggaccaccATCGTCTGCACCACATAATTTACAGCCACCACAACAACAACAGCAGCAGCAACAGCTATCACAAATGCCACAACAAATGCCGCCTGGTGGCGGTGGTGTTGGTGGCCTTGGGCCACTTGGTCCAAATAGTCATTCAGATGTAAATATGCCACTAGAAGGTCCCcaggacaatggtgtcagttcgtctggatcaacacaatcaaattcttcacttcatccggttacatcaattgtaacgacggggccagatggtgctcccatggacgaagctagtcagcaaagtacactatcgaatgcttcagctgcttctattgaagatccacaatgtgcaacgcctaaatctagaaaaaatgaatcttataatcaaagtcacttggcaccacccagtgcgtcgcccGGAGCTCATGCACAGCATGAAGACTTTGAGATGGGTTCACCAACATGGCCACGAACACCAGCTAGTCCAGTATTTAATAGCCACGGCCCAGCCGAACCCGTACATAGATCATCTAAGaaatcggacagcttatgtaaattatacgacatggatgacaatccagatcgacgaggatggttagacaagctattgggttttatggatgaaagacgtacaccgattacggcgtgtccgacgatatcaaaacaaccattggatttgtataggttatatatgttggttaaagaacggggcggattcgtcgaggttaccaaaagtaaaacatggaaagatattgccggtctattgggtattggtgctagtagcagtgctgcatatacgttaagaaaacactatacgaaaaatctacttgctttcgaatgtcattttgatcgaggtggcgttgatccgttgccaattatacaacaagtcgaggctggttcaaaaaagaaatcaacaaaagctgcatcgattccatcaccaggttcgtcaaattcacaagattcatttccaccgcccggctcaacgtcaacatcgatggacggctacggtggctatccgagtggctatccacccggtgctggtcccggttacaatgaaccaccgatgcaacgaccaccgtcacaaagtaattcacaatcaccacattcagGTAATGCACAAGCCTCTACTGCGGCGGCCAGTAATTGTGGTGAGAATAGTATTAATGTAAGCAATCCCTTTGATGAACCGGTGTCAGGTGCAGGTTGTTCACGTGGTCAACGTAACGCCGCCACTCATACATATCAACAAGGTGTTCCGCCCTATCCATCCTCTGTATTACGATCCGCACCACAAGGTGCTCCATATCCAGGACAACAGGGTTATTCGTATGGAGGACCAGATCAATATGGTCCACCACAACCACCCGGTCAATATCCACAAACTCAGGGTCAATTTCCGCCACCAAATCGAACAATGTATCCTCCGTATGGTGGTCCACCACCAGGACCTGAAGGCGATGCAAATTCTGCATCAACGTCTGGCGGTCCGCCAGGGCCAAATGATCCGTATCGAGGATATGGTGGTTCGCCTGGCTCGTATCCACCGCCAAGACCGTATGGTCAACAACAACCACAACCACCACCACCCCAACAGCCACAACAACAACCACAACCACCACAATCCCAACAATCCCAACCACAGCAGCAGCAGCAACAACAACAAAATCCACAACAACCGCCGCAACCACCCCAACAACCTCCGGCTAGTGGGGTTGGCGCAACTGCTACTGTACCGCCAGCTGGTGCTGGTGGTGCACCATCACAAACACCAGCCGGAGCACCTGGTCCATATCCACCACCTCCACAACAATTCGATTATCGACCAGATCAA
Protein Sequence
MLFYYKVILNWKGLNLVSLVQGQQSLPMPPRPSSSHSQTSNQAPNNNSSQTNQPQTIDPAVTPPTRPPPQSSTTPTPPGMAAQGSYQTAPPQPPHMHGGYKMGPNPGQGPGAGSQNMPPYPPQSQQYAQGNYSPRPQYPSNYGPAPTNQPPPSNNMGPMGPGQYQGRPLPNHGAPHSQFPPYQNWGPAPQSGMNHVQGKNTPPPPPPGSSPRPLNHLKQHLMHKSGYGGAPSPTPPQGYGNGPGMHPPMGPPHHMGPSQHGPTNMGPPSSAPHNLQPPQQQQQQQQLSQMPQQMPPGGGGVGGLGPLGPNSHSDVNMPLEGPQDNGVSSSGSTQSNSSLHPVTSIVTTGPDGAPMDEASQQSTLSNASAASIEDPQCATPKSRKNESYNQSHLAPPSASPGAHAQHEDFEMGSPTWPRTPASPVFNSHGPAEPVHRSSKKSDSLCKLYDMDDNPDRRGWLDKLLGFMDERRTPITACPTISKQPLDLYRLYMLVKERGGFVEVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGGVDPLPIIQQVEAGSKKKSTKAASIPSPGSSNSQDSFPPPGSTSTSMDGYGGYPSGYPPGAGPGYNEPPMQRPPSQSNSQSPHSGNAQASTAAASNCGENSINVSNPFDEPVSGAGCSRGQRNAATHTYQQGVPPYPSSVLRSAPQGAPYPGQQGYSYGGPDQYGPPQPPGQYPQTQGQFPPPNRTMYPPYGGPPPGPEGDANSASTSGGPPGPNDPYRGYGGSPGSYPPPRPYGQQQPQPPPPQQPQQQPQPPQSQQSQPQQQQQQQQNPQQPPQPPQQPPASGVGATATVPPAGAGGAPSQTPAGAPGPYPPPPQQFDYRPDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-